RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	LYNX1	P0DP58	116 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	HTR5A	P47898	357 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	GLO1	Q04760	184 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	KRTAP1-1	Q07627	177 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	GGTLC2	Q14390	218 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	MEP1B	Q16820	701 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	MICA	Q29983	383 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	ZNF770	Q6IQ21	691 aa	Predicted RBP	12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	PGM2L1	Q6PCE3	622 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	AQP12A	Q8IXF9	295 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	OR6V1	Q8N148	313 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	ABHD4	Q8TB40	342 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	PLA2G12A	Q9BZM1	189 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	MYOZ1	Q9NP98	299 aa	Predicted RBP	12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	PLEK2	Q9NYT0	353 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	ASH2L	Q9UBL3	628 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459		A0A096LNT2	108 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	OR6C68	A6NDL8	312 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	INAFM1	C9JVW0	142 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	NDUFS8	O00217	210 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	GSC2	O15499	205 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	IDH3B	O43837	385 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	SOX14	O95416	240 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	NGF	P01138	241 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	ZNF250	P15622	560 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	HOXB4	P17483	251 aa	Predicted RBP	12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	USF1	P22415	310 aa	Predicted RBP	12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	GCH1	P30793	250 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	LSM6	P62312	80 aa	Known RBP	12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	PPP2R2B	Q00005	443 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	LOXL1	Q08397	574 aa	Predicted RBP	12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	BNIP1	Q12981	228 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	AQP6	Q13520	282 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	ZNF718	Q3SXZ3	478 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	RPL13AP3	Q6NVV1	102 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	UNQ6126/PRO20091	Q6UXV3	157 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	RASSF6	Q6ZTQ3	369 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	VASH1	Q7L8A9	365 aa	Predicted RBP	12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	OR10G2	Q8NGC3	310 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	OR8D4	Q8NGM9	314 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	SLC25A40	Q8TBP6	338 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	UBASH3B	Q8TF42	649 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	SNX33	Q8WV41	574 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	C4orf45	Q96LM5	186 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	WAC	Q9BTA9	647 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	TSSK6	Q9BXA6	273 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	CADM1	Q9BY67	442 aa	Known RBP	12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	OR2J1	Q9GZK6	312 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	TBC1D23	Q9NUY8	699 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	SLCO1C1	Q9NYB5	712 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	IL20	Q9NYY1	176 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	GPR160	Q9UJ42	338 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	NDRG4	Q9ULP0	352 aa	Known RBP	12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	POMP	Q9Y244	141 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	HIVEP2	P31629	2446 aa		12.12	□□□□□ -0.47
CCHCR1-222	ENST00000507459	IGLV3-9	A0A075B6K5	115 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	IGLV1-36	A0A0B4J1U3	117 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	BHLHE40	O14503	412 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	RER1	O15258	196 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	ABHD16A	O95870	558 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	HLA-DQA2	P01906	255 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	HPX	P02790	462 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	MPV17	P39210	176 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	NR4A2	P43354	598 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	PPP1CB	P62140	327 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	TMEM249	Q2WGJ8	235 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	CCDC92	Q53HC0	331 aa	Predicted RBP	12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	CORO6	Q6QEF8	472 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	ARL9	Q6T311	187 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	RFPL4B	Q6ZWI9	263 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	CYB561A3	Q8NBI2	242 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	GIPC3	Q8TF64	312 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	SLC7A6	Q92536	515 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	POM121	Q96HA1	1249 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	SNX18	Q96RF0	628 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	BPESC1	Q9GZL8	116 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	ELOVL3	Q9HB03	270 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	HINT3	Q9NQE9	182 aa	Known RBP	12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	YAE1D1	Q9NRH1	226 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	GRIP1	Q9Y3R0	1128 aa		12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	CHD3	Q12873	2000 aa	Known RBP	12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	FN1	P02751	2386 aa	Known RBP	12.11	□□□□□ -0.47
CCHCR1-222	ENST00000507459	NIPBL	Q6KC79	2804 aa	eCLIP	12.1	□□□□□ -0.47
CCHCR1-222	ENST00000507459	VWC2L	B2RUY7	222 aa		12.1	□□□□□ -0.47
CCHCR1-222	ENST00000507459	CD5L	O43866	347 aa		12.1	□□□□□ -0.47
CCHCR1-222	ENST00000507459	E2F6	O75461	281 aa		12.1	□□□□□ -0.47
CCHCR1-222	ENST00000507459	GAA	P10253	952 aa		12.1	□□□□□ -0.47
CCHCR1-222	ENST00000507459	COX5B	P10606	129 aa		12.1	□□□□□ -0.47
CCHCR1-222	ENST00000507459	GSTM3	P21266	225 aa		12.1	□□□□□ -0.47
CCHCR1-222	ENST00000507459	PYCR1	P32322	319 aa		12.1	□□□□□ -0.47
CCHCR1-222	ENST00000507459	MAGEB1	P43366	347 aa		12.1	□□□□□ -0.47
CCHCR1-222	ENST00000507459	ARHGDIA	P52565	204 aa		12.1	□□□□□ -0.47
CCHCR1-222	ENST00000507459	TEK	Q02763	1124 aa		12.1	□□□□□ -0.47
CCHCR1-222	ENST00000507459	KCNMB1	Q16558	191 aa		12.1	□□□□□ -0.47
CCHCR1-222	ENST00000507459	MOG	Q16653	247 aa		12.1	□□□□□ -0.47
CCHCR1-222	ENST00000507459	TMEM154	Q6P9G4	183 aa		12.1	□□□□□ -0.47
CCHCR1-222	ENST00000507459	TMEM179B	Q7Z7N9	219 aa		12.1	□□□□□ -0.47
CCHCR1-222	ENST00000507459	ZBTB46	Q86UZ6	589 aa		12.1	□□□□□ -0.47
CCHCR1-222	ENST00000507459	LINC00346	Q8IVM7	164 aa		12.1	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms