RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 OR2AJ1Q8NGZ0 328 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 HPS1Q92902 700 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 NABP1Q96AH0 204 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 NMD3Q96D46 503 aaKnown RBP7.83□□□□□ -1.16
HDAC6-232ENST00000489053 ELMOD3Q96FG2 381 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 POM121L2Q96KW2 1035 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 C4orf45Q96LM5 186 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 SAMD8Q96LT4 415 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 ZNF75AQ96N20 296 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 GPX7Q96SL4 187 aaPredicted RBP7.83□□□□□ -1.16
HDAC6-232ENST00000489053 WNT5BQ9H1J7 359 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 OR52D1Q9H346 318 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 NARFLQ9H6Q4 476 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 SAP30LQ9HAJ7 183 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 IL1RAPQ9NPH3 570 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 NRIP3Q9NQ35 241 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 TBC1D23Q9NUY8 699 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 VSX1Q9NZR4 365 aaPredicted RBP7.83□□□□□ -1.16
HDAC6-232ENST00000489053 ASH2LQ9UBL3 628 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 CGGBP1Q9UFW8 167 aaPredicted RBP7.83□□□□□ -1.16
HDAC6-232ENST00000489053 CD300AQ9UGN4 299 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 PRPF19Q9UMS4 504 aaKnown RBP7.83□□□□□ -1.16
HDAC6-232ENST00000489053 COA3Q9Y2R0 106 aaPredicted RBP7.83□□□□□ -1.16
HDAC6-232ENST00000489053 COL6A5A8TX70 2615 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 VWC2LB2RUY7 222 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 CLDN25C9JDP6 229 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 LYNX1G3V0Z9 82 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 H3BSA7 217 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 SPRY3O43610 288 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 IDH3BO43837 385 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 PTP4A3O75365 173 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 LYNX1P0DP58 116 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 COX5BP10606 129 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 FUT4P22083 530 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 TUBG1P23258 451 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 SRP14P37108 136 aaKnown RBP7.82□□□□□ -1.16
HDAC6-232ENST00000489053 RGS6P49758 472 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 TMEM33P57088 247 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 LSM6P62312 80 aaKnown RBP7.82□□□□□ -1.16
HDAC6-232ENST00000489053 MRPS11P82912 194 aaKnown RBP7.82□□□□□ -1.16
HDAC6-232ENST00000489053 KRTAP1-1Q07627 177 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 SLC3A1Q07837 685 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 TSPAN31Q12999 210 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 TSTQ16762 297 aaKnown RBP7.82□□□□□ -1.16
HDAC6-232ENST00000489053 DNAL1Q4LDG9 190 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 FAM209AQ5JX71 171 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 LINC01356Q8N9X3 169 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 PROKR2Q8NFJ6 384 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 GJC3Q8NFK1 279 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 OR4K13Q8NH42 304 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 SLC25A40Q8TBP6 338 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 IPCEF1Q8WWN9 437 aaPredicted RBP7.82□□□□□ -1.16
HDAC6-232ENST00000489053 DHRS1Q96LJ7 313 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 DIRC2Q96SL1 478 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 OR2J1Q9GZK6 312 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 NUAK2Q9H093 628 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 YY1AP1Q9H869 796 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 SRA1Q9HD15 236 aaKnown RBP7.82□□□□□ -1.16
HDAC6-232ENST00000489053 RPRD1BQ9NQG5 326 aaKnown RBP7.82□□□□□ -1.16
HDAC6-232ENST00000489053 TUBG2Q9NRH3 451 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 MYEF2Q9P2K5 600 aaKnown RBP7.82□□□□□ -1.16
HDAC6-232ENST00000489053 SAMHD1Q9Y3Z3 626 aaKnown RBP7.82□□□□□ -1.16
HDAC6-232ENST00000489053 ABCA1O95477 2261 aa7.82□□□□□ -1.16
HDAC6-232ENST00000489053 RTTNQ86VV8 2226 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 IGLV3-9A0A075B6K5 115 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 LOC100509620A0A075B734 347 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 IGHV1-69-2A0A0G2JMI3 117 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 ISPDA4D126 451 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 LRP5LA4QPB2 252 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 OR6C6A6NF89 314 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 RIIAD1A6NNX1 92 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 SURF4O15260 269 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 GYG2O15488 501 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 E2F6O75461 281 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 TXNDC12O95881 172 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 IFNGP01579 166 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 IGHV3-13P01766 116 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 HPXP02790 462 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 SEMG1P04279 462 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 ZNF823P16415 610 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 HOXB6P17509 224 aaKnown RBP7.81□□□□□ -1.16
HDAC6-232ENST00000489053 SRD5A1P18405 259 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 ATP6V1B2P21281 511 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 MAGEB1P43366 347 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 ENDOGQ14249 297 aaKnown RBP7.81□□□□□ -1.16
HDAC6-232ENST00000489053 TRIM25Q14258 630 aaKnown RBP7.81□□□□□ -1.16
HDAC6-232ENST00000489053 MSMPQ1L6U9 139 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 SLC35F1Q5T1Q4 408 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 MBNL2Q5VZF2 373 aaKnown RBP7.81□□□□□ -1.16
HDAC6-232ENST00000489053 LCN8Q6JVE9 175 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 SHQ1Q6PI26 577 aaKnown RBP7.81□□□□□ -1.16
HDAC6-232ENST00000489053 THSD4Q6ZMP0 1018 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 RINLQ6ZS11 566 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 FOXL2NBQ6ZUU3 175 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 RFPL4BQ6ZWI9 263 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 FAM122BQ7Z309 247 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 TSEN54Q7Z6J9 526 aaKnown RBP7.81□□□□□ -1.16
HDAC6-232ENST00000489053 GLCCI1Q86VQ1 547 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 HIPK1Q86Z02 1210 aa7.81□□□□□ -1.16
HDAC6-232ENST00000489053 ZNF101Q8IZC7 436 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms