RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 PIN1P1O15428 100 aa13.44□□□□□ -0.26
DDX56-210ENST00000479440 CST2P09228 141 aa13.44□□□□□ -0.26
DDX56-210ENST00000479440 RBMXP38159 391 aaKnown RBP13.44□□□□□ -0.26
DDX56-210ENST00000479440 GUCA1AP43080 201 aaPredicted RBP13.44□□□□□ -0.26
DDX56-210ENST00000479440 PITPNBP48739 271 aa13.44□□□□□ -0.26
DDX56-210ENST00000479440 STX1BP61266 288 aa13.44□□□□□ -0.26
DDX56-210ENST00000479440 FGF12P61328 243 aa13.44□□□□□ -0.26
DDX56-210ENST00000479440 FMODQ06828 376 aa13.44□□□□□ -0.26
DDX56-210ENST00000479440 FAM27BQ5VT28 67 aa13.44□□□□□ -0.26
DDX56-210ENST00000479440 SLC27A4Q6P1M0 643 aa13.44□□□□□ -0.26
DDX56-210ENST00000479440 Q6ZR03 302 aa13.44□□□□□ -0.26
DDX56-210ENST00000479440 PTOV1Q86YD1 416 aa13.44□□□□□ -0.26
DDX56-210ENST00000479440 C10orf111Q8N326 155 aa13.44□□□□□ -0.26
DDX56-210ENST00000479440 OR6T1Q8NGN1 323 aa13.44□□□□□ -0.26
DDX56-210ENST00000479440 FAM110DQ8TAY7 271 aaPredicted RBP13.44□□□□□ -0.26
DDX56-210ENST00000479440 TBC1D15Q8TC07 691 aa13.44□□□□□ -0.26
DDX56-210ENST00000479440 COG8Q96MW5 612 aa13.44□□□□□ -0.26
DDX56-210ENST00000479440 ZNF426Q9BUY5 554 aa13.44□□□□□ -0.26
DDX56-210ENST00000479440 TMEM109Q9BVC6 243 aa13.44□□□□□ -0.26
DDX56-210ENST00000479440 TBCCD1Q9NVR7 557 aa13.44□□□□□ -0.26
DDX56-210ENST00000479440 THAP1Q9NVV9 213 aa13.44□□□□□ -0.26
DDX56-210ENST00000479440 NPIPB13A6NJU9 1138 aa13.43□□□□□ -0.26
DDX56-210ENST00000479440 NPIPB4C9JG80 1138 aa13.43□□□□□ -0.26
DDX56-210ENST00000479440 PHYHO14832 338 aa13.43□□□□□ -0.26
DDX56-210ENST00000479440 THRBP10828 461 aa13.43□□□□□ -0.26
DDX56-210ENST00000479440 PROK1P58294 105 aa13.43□□□□□ -0.26
DDX56-210ENST00000479440 NPTX1Q15818 432 aa13.43□□□□□ -0.26
DDX56-210ENST00000479440 RUSC1-AS1Q66K80 236 aa13.43□□□□□ -0.26
DDX56-210ENST00000479440 MSRB3Q8IXL7 192 aa13.43□□□□□ -0.26
DDX56-210ENST00000479440 C1orf87Q8N0U7 546 aa13.43□□□□□ -0.26
DDX56-210ENST00000479440 FITM2Q8N6M3 262 aa13.43□□□□□ -0.26
DDX56-210ENST00000479440 LINC01006Q8NI28 216 aa13.43□□□□□ -0.26
DDX56-210ENST00000479440 FNDC8Q8TC99 324 aa13.43□□□□□ -0.26
DDX56-210ENST00000479440 GCM1Q9NP62 436 aa13.43□□□□□ -0.26
DDX56-210ENST00000479440 CLN8Q9UBY8 286 aa13.43□□□□□ -0.26
DDX56-210ENST00000479440 GMEB1Q9Y692 573 aa13.43□□□□□ -0.26
DDX56-210ENST00000479440 IGKV1D-43A0A0B4J1Z2 117 aa13.42□□□□□ -0.26
DDX56-210ENST00000479440 C5orf63A6NC05 138 aa13.42□□□□□ -0.26
DDX56-210ENST00000479440 LRRC30A6NM36 301 aa13.42□□□□□ -0.26
DDX56-210ENST00000479440 EVPLLA8MZ36 301 aa13.42□□□□□ -0.26
DDX56-210ENST00000479440 ENSAO43768 121 aaKnown RBP13.42□□□□□ -0.26
DDX56-210ENST00000479440 LYPD3O95274 346 aa13.42□□□□□ -0.26
DDX56-210ENST00000479440 THY1P04216 161 aa13.42□□□□□ -0.26
DDX56-210ENST00000479440 COX5BP10606 129 aa13.42□□□□□ -0.26
DDX56-210ENST00000479440 LAP3P28838 519 aa13.42□□□□□ -0.26
DDX56-210ENST00000479440 GUCY1A3Q02108 690 aa13.42□□□□□ -0.26
DDX56-210ENST00000479440 ZNF404Q494X3 552 aa13.42□□□□□ -0.26
DDX56-210ENST00000479440 ARMC4Q5T2S8 1044 aa13.42□□□□□ -0.26
DDX56-210ENST00000479440 VASH1Q7L8A9 365 aaPredicted RBP13.42□□□□□ -0.26
DDX56-210ENST00000479440 GATAD2BQ8WXI9 593 aa13.42□□□□□ -0.26
DDX56-210ENST00000479440 HDAC2Q92769 488 aaKnown RBP13.42□□□□□ -0.26
DDX56-210ENST00000479440 NMD3Q96D46 503 aaKnown RBP13.42□□□□□ -0.26
DDX56-210ENST00000479440 TMEM246Q9BRR3 403 aa13.42□□□□□ -0.26
DDX56-210ENST00000479440 TMEM165Q9HC07 324 aa13.42□□□□□ -0.26
DDX56-210ENST00000479440 KCNK9Q9NPC2 374 aa13.42□□□□□ -0.26
DDX56-210ENST00000479440 VAPAQ9P0L0 249 aa13.42□□□□□ -0.26
DDX56-210ENST00000479440 C12orf71A8MTZ7 269 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 P2RY10O00398 339 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 TNFRSF13BO14836 293 aaPredicted RBP13.41□□□□□ -0.26
DDX56-210ENST00000479440 GPR137BO60478 399 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 SNNO75324 88 aaPredicted RBP13.41□□□□□ -0.26
DDX56-210ENST00000479440 OR7A10O76100 309 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 ZNF205O95201 554 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 FSTL3O95633 263 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 CYB5R3P00387 301 aaPredicted RBP13.41□□□□□ -0.26
DDX56-210ENST00000479440 OPN1SWP03999 348 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 CSF1P09603 554 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 CD247P20963 164 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 AQP2P41181 271 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 HTR5AP47898 357 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 SRP9P49458 86 aaKnown RBP13.41□□□□□ -0.26
DDX56-210ENST00000479440 BEAN1Q3B7T3 259 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 SLC25A47Q6Q0C1 308 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 REC114Q7Z4M0 266 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 SYT9Q86SS6 491 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 ATG16L2Q8NAA4 619 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 C11orf65Q8NCR3 313 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 ZNF420Q8TAQ5 688 aaPredicted RBP13.41□□□□□ -0.26
DDX56-210ENST00000479440 MEGF10Q96KG7 1140 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 PCGF1Q9BSM1 259 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 WACQ9BTA9 647 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 ALG12Q9BV10 488 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 POFUT1Q9H488 388 aa13.41□□□□□ -0.26
DDX56-210ENST00000479440 MEPEQ9NQ76 525 aaPredicted RBP13.41□□□□□ -0.26
DDX56-210ENST00000479440 A0A1W2PPL8 197 aa13.4□□□□□ -0.26
DDX56-210ENST00000479440 DOK2O60496 412 aa13.4□□□□□ -0.26
DDX56-210ENST00000479440 MT-ND1P03886 318 aa13.4□□□□□ -0.26
DDX56-210ENST00000479440 GPX2P18283 190 aa13.4□□□□□ -0.26
DDX56-210ENST00000479440 MSR1P21757 451 aa13.4□□□□□ -0.26
DDX56-210ENST00000479440 PCBP3P57721 371 aaKnown RBP13.4□□□□□ -0.26
DDX56-210ENST00000479440 DUSP7Q16829 419 aa13.4□□□□□ -0.26
DDX56-210ENST00000479440 ZNF181Q2M3W8 571 aa13.4□□□□□ -0.26
DDX56-210ENST00000479440 GDPGP1Q6ZNW5 385 aa13.4□□□□□ -0.26
DDX56-210ENST00000479440 FOXL2NBQ6ZUU3 175 aa13.4□□□□□ -0.26
DDX56-210ENST00000479440 GPR32P1Q8NGA4 272 aa13.4□□□□□ -0.26
DDX56-210ENST00000479440 LRTOMTQ8WZ04 291 aa13.4□□□□□ -0.26
DDX56-210ENST00000479440 HAVCR1Q96D42 359 aa13.4□□□□□ -0.26
DDX56-210ENST00000479440 CMBLQ96DG6 245 aa13.4□□□□□ -0.26
DDX56-210ENST00000479440 SPDL1Q96EA4 605 aa13.4□□□□□ -0.26
DDX56-210ENST00000479440 SGTBQ96EQ0 304 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms