RNA–Protein interactions for RNA: ENST00000395145.3

CLDN3-201, Transcript of claudin 3, humanhuman

APPRIS P1 BASIC

Gene CLDN3, Length 1,274 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3-201ENST00000395145 MEP1BQ16820 701 aa17.59■□□□□ 0.41
CLDN3-201ENST00000395145 HIST2H3PS2Q5TEC6 136 aa17.59■□□□□ 0.41
CLDN3-201ENST00000395145 OTPQ5XKR4 325 aa17.59■□□□□ 0.41
CLDN3-201ENST00000395145 VHLLQ6RSH7 139 aa17.59■□□□□ 0.41
CLDN3-201ENST00000395145 HIST2H3AQ71DI3 136 aa17.59■□□□□ 0.41
CLDN3-201ENST00000395145 KRTAP1-3Q8IUG1 177 aa17.59■□□□□ 0.41
CLDN3-201ENST00000395145 PROKR2Q8NFJ6 384 aa17.59■□□□□ 0.41
CLDN3-201ENST00000395145 OR9Q1Q8NGQ5 310 aa17.59■□□□□ 0.41
CLDN3-201ENST00000395145 PERPQ96FX8 193 aa17.59■□□□□ 0.41
CLDN3-201ENST00000395145 OSBPL10Q9BXB5 764 aa17.59■□□□□ 0.41
CLDN3-201ENST00000395145 MRPL22Q9NWU5 206 aaKnown RBP17.59■□□□□ 0.41
CLDN3-201ENST00000395145 ATPIF1Q9UII2 106 aa17.59■□□□□ 0.41
CLDN3-201ENST00000395145 KCNG2Q9UJ96 466 aa17.59■□□□□ 0.41
CLDN3-201ENST00000395145 NDRG4Q9ULP0 352 aaKnown RBP17.59■□□□□ 0.41
CLDN3-201ENST00000395145 LHFPL6Q9Y693 200 aa17.59■□□□□ 0.41
CLDN3-201ENST00000395145 B9A039 149 aa17.58■□□□□ 0.4
CLDN3-201ENST00000395145 SURF4O15260 269 aa17.58■□□□□ 0.4
CLDN3-201ENST00000395145 GPRIN2O60269 458 aa17.58■□□□□ 0.4
CLDN3-201ENST00000395145 DOK2O60496 412 aa17.58■□□□□ 0.4
CLDN3-201ENST00000395145 ICMTO60725 284 aa17.58■□□□□ 0.4
CLDN3-201ENST00000395145 SPI1P17947 270 aa17.58■□□□□ 0.4
CLDN3-201ENST00000395145 CDKN1AP38936 164 aa17.58■□□□□ 0.4
CLDN3-201ENST00000395145 GDI2P50395 445 aaKnown RBP17.58■□□□□ 0.4
CLDN3-201ENST00000395145 PPP2R2BQ00005 443 aa17.58■□□□□ 0.4
CLDN3-201ENST00000395145 ZSCAN26Q16670 478 aa17.58■□□□□ 0.4
CLDN3-201ENST00000395145 SHEQ5VZ18 495 aa17.58■□□□□ 0.4
CLDN3-201ENST00000395145 PRSS57Q6UWY2 283 aa17.58■□□□□ 0.4
CLDN3-201ENST00000395145 VASH1Q7L8A9 365 aaPredicted RBP17.58■□□□□ 0.4
CLDN3-201ENST00000395145 OR10H5Q8NGA6 315 aa17.58■□□□□ 0.4
CLDN3-201ENST00000395145 ZNRF4Q8WWF5 429 aa17.58■□□□□ 0.4
CLDN3-201ENST00000395145 TRMT61AQ96FX7 289 aaKnown RBP17.58■□□□□ 0.4
CLDN3-201ENST00000395145 CACNG6Q9BXT2 260 aa17.58■□□□□ 0.4
CLDN3-201ENST00000395145 PLK3Q9H4B4 646 aa17.58■□□□□ 0.4
CLDN3-201ENST00000395145 S100A14Q9HCY8 104 aa17.58■□□□□ 0.4
CLDN3-201ENST00000395145 TMEFF2Q9UIK5 374 aaPredicted RBP17.58■□□□□ 0.4
CLDN3-201ENST00000395145 POLR1DQ9Y2S0 133 aa17.58■□□□□ 0.4
CLDN3-201ENST00000395145 CMAHPQ9Y471 501 aa17.58■□□□□ 0.4
CLDN3-201ENST00000395145 C5orf49A4QMS7 147 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 OR6C6A6NF89 314 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 H7C417 338 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 SYNGR3O43761 229 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 MITFO75030 526 aaPredicted RBP17.57■□□□□ 0.4
CLDN3-201ENST00000395145 HLA-DQA2P01906 255 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 BMP4P12644 408 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 GGT2P36268 569 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 RAD52P43351 418 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 UCP2P55851 309 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 RAB35Q15286 201 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 MSMPQ1L6U9 139 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 CCDC92Q53HC0 331 aaPredicted RBP17.57■□□□□ 0.4
CLDN3-201ENST00000395145 TMEM236Q5W0B7 351 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 ICA1LQ8NDH6 482 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 GJC3Q8NFK1 279 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 PTP4A1Q93096 173 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 MRPL24Q96A35 216 aaKnown RBP17.57■□□□□ 0.4
CLDN3-201ENST00000395145 HCAR1Q9BXC0 346 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 TEX12Q9BXU0 123 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 BCL2L14Q9BZR8 327 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 PLEK2Q9NYT0 353 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 CYB5R1Q9UHQ9 305 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 ENOPH1Q9UHY7 261 aa17.57■□□□□ 0.4
CLDN3-201ENST00000395145 FBXO9Q9UK97 447 aaPredicted RBP17.57■□□□□ 0.4
CLDN3-201ENST00000395145 TMEM129A0AVI4 362 aa17.56■□□□□ 0.4
CLDN3-201ENST00000395145 SAC3D1A6NKF1 404 aa17.56■□□□□ 0.4
CLDN3-201ENST00000395145 RER1O15258 196 aa17.56■□□□□ 0.4
CLDN3-201ENST00000395145 GYPBP06028 91 aa17.56■□□□□ 0.4
CLDN3-201ENST00000395145 CLUP10909 449 aa17.56■□□□□ 0.4
CLDN3-201ENST00000395145 PAICSP22234 425 aaKnown RBP17.56■□□□□ 0.4
CLDN3-201ENST00000395145 IGFBP5P24593 272 aa17.56■□□□□ 0.4
CLDN3-201ENST00000395145 WNT5AP41221 380 aa17.56■□□□□ 0.4
CLDN3-201ENST00000395145 HTR5AP47898 357 aa17.56■□□□□ 0.4
CLDN3-201ENST00000395145 EVX1P49640 407 aa17.56■□□□□ 0.4
CLDN3-201ENST00000395145 BLVRAP53004 296 aa17.56■□□□□ 0.4
CLDN3-201ENST00000395145 ATP5J2P56134 94 aa17.56■□□□□ 0.4
CLDN3-201ENST00000395145 PTGES3Q15185 160 aaKnown RBP17.56■□□□□ 0.4
CLDN3-201ENST00000395145 LINC01590Q5TEZ4 76 aa17.56■□□□□ 0.4
CLDN3-201ENST00000395145 SLC18B1Q6NT16 456 aa17.56■□□□□ 0.4
CLDN3-201ENST00000395145 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.56■□□□□ 0.4
CLDN3-201ENST00000395145 OR51L1Q8NGJ5 315 aa17.56■□□□□ 0.4
CLDN3-201ENST00000395145 CIB1Q99828 191 aa17.56■□□□□ 0.4
CLDN3-201ENST00000395145 RBM4BQ9BQ04 359 aaKnown RBP17.56■□□□□ 0.4
CLDN3-201ENST00000395145 PMF1-BGLAPU3KQ54 211 aa17.56■□□□□ 0.4
CLDN3-201ENST00000395145 HIVEP1P15822 2718 aa17.56■□□□□ 0.4
CLDN3-201ENST00000395145 VPS13CQ709C8 3753 aa17.55■□□□□ 0.4
CLDN3-201ENST00000395145 FAM183AA6NL82 134 aa17.55■□□□□ 0.4
CLDN3-201ENST00000395145 ZAR1LA6NP61 321 aa17.55■□□□□ 0.4
CLDN3-201ENST00000395145 PRR23D1E9PI22 279 aaPredicted RBP17.55■□□□□ 0.4
CLDN3-201ENST00000395145 FAM157BP0CG42 384 aa17.55■□□□□ 0.4
CLDN3-201ENST00000395145 PRR23D2P0DMB1 279 aaPredicted RBP17.55■□□□□ 0.4
CLDN3-201ENST00000395145 ZNF823P16415 610 aa17.55■□□□□ 0.4
CLDN3-201ENST00000395145 CCNOP22674 350 aa17.55■□□□□ 0.4
CLDN3-201ENST00000395145 FMO3P31513 532 aa17.55■□□□□ 0.4
CLDN3-201ENST00000395145 SNRPD2P62316 118 aaKnown RBP17.55■□□□□ 0.4
CLDN3-201ENST00000395145 ADAM8P78325 824 aa17.55■□□□□ 0.4
CLDN3-201ENST00000395145 PCK2Q16822 640 aa17.55■□□□□ 0.4
CLDN3-201ENST00000395145 Q5PR19 223 aa17.55■□□□□ 0.4
CLDN3-201ENST00000395145 CORO6Q6QEF8 472 aa17.55■□□□□ 0.4
CLDN3-201ENST00000395145 LYPD4Q6UWN0 246 aa17.55■□□□□ 0.4
CLDN3-201ENST00000395145 UNQ6126/PRO20091Q6UXV3 157 aa17.55■□□□□ 0.4
CLDN3-201ENST00000395145 C1orf174Q8IYL3 243 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms