RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 FOXRED2Q8IWF2 684 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 OR1J4Q8NGS1 313 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 MRPL22Q9NWU5 206 aaKnown RBP12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 GLTPQ9NZD2 209 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 LOC107986453A0A1B0GWG9 222 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 GGT3PA6NGU5 568 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 CLPSP04118 112 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 CFIP05156 583 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 VSIG10L2P0DP72 767 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 AKR1C4P17516 323 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 SLC6A9P48067 706 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 MOGAT2Q3SYC2 334 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 FAM74A1Q5RGS3 127 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 EEF1A1P5Q5VTE0 462 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 TMEM225Q6GV28 225 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 RHOUQ7L0Q8 258 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 BPHLQ86WA6 291 aaPredicted RBP12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 APMAPQ9HDC9 416 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 KLHL13Q9P2N7 655 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 ZNF230Q9UIE0 474 aaPredicted RBP12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 MOKQ9UQ07 419 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 MAB21L2Q9Y586 359 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 EML5Q05BV3 1969 aa12.29□□□□□ -0.44
PRPF40B-209ENST00000548825 MYO7BQ6PIF6 2116 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 LMO7DNF2Z398 122 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 ZNF217O75362 1048 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 CTAG2O75638 210 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 PI3P19957 117 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 FAM209AQ5JX71 171 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 MUC20Q8N307 709 aaPredicted RBP12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 ACTR6Q9GZN1 396 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 EPHA6Q9UF33 1036 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 MEIKINA0A087WXM9 373 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 IGHV3-15A0A0B4J1V0 119 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 SHISA7A6NL88 538 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 ZNHIT1O43257 154 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 CYB5AP00167 134 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 HTR2CP28335 458 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 ARPC4P59998 168 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 PUDPQ08623 228 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 FOXF1Q12946 379 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 EXOSC6Q5RKV6 272 aaKnown RBP12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 PAPD4Q6PIY7 484 aaKnown RBP12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 SYT13Q7L8C5 426 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 ZNF679Q8IYX0 411 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 ZSCAN1Q8NBB4 408 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 ADIPOR1Q96A54 375 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 BANF2Q9H503 90 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 ASPMQ8IZT6 3477 aa12.28□□□□□ -0.44
PRPF40B-209ENST00000548825 TEX51A0A1B0GUA7 166 aa12.27□□□□□ -0.44
PRPF40B-209ENST00000548825 FRG2CA6NGY1 282 aa12.27□□□□□ -0.44
PRPF40B-209ENST00000548825 EEF1E1-BLOC1S5C9J1V9 151 aa12.27□□□□□ -0.44
PRPF40B-209ENST00000548825 RAB40ALP0C0E4 278 aa12.27□□□□□ -0.44
PRPF40B-209ENST00000548825 SULT1A3P0DMM9 295 aa12.27□□□□□ -0.44
PRPF40B-209ENST00000548825 SULT1A4P0DMN0 295 aa12.27□□□□□ -0.44
PRPF40B-209ENST00000548825 RASGEF1BQ0VAM2 473 aa12.27□□□□□ -0.44
PRPF40B-209ENST00000548825 TDGQ13569 410 aa12.27□□□□□ -0.44
PRPF40B-209ENST00000548825 GGTLC2Q14390 218 aa12.27□□□□□ -0.44
PRPF40B-209ENST00000548825 GLT8D1Q68CQ7 371 aa12.27□□□□□ -0.44
PRPF40B-209ENST00000548825 STEAP1BQ6NZ63 245 aa12.27□□□□□ -0.44
PRPF40B-209ENST00000548825 BATF2Q8N1L9 274 aa12.27□□□□□ -0.44
PRPF40B-209ENST00000548825 RAB40AQ8WXH6 277 aa12.27□□□□□ -0.44
PRPF40B-209ENST00000548825 MAFIPQ8WZ33 124 aa12.27□□□□□ -0.44
PRPF40B-209ENST00000548825 TMEM41AQ96HV5 264 aa12.27□□□□□ -0.44
PRPF40B-209ENST00000548825 SOX7Q9BT81 388 aa12.27□□□□□ -0.44
PRPF40B-209ENST00000548825 LAT2Q9GZY6 243 aa12.27□□□□□ -0.44
PRPF40B-209ENST00000548825 POFUT1Q9H488 388 aa12.27□□□□□ -0.44
PRPF40B-209ENST00000548825 PRR13Q9NZ81 148 aa12.27□□□□□ -0.44
PRPF40B-209ENST00000548825 TMEM272A0A1B0GTI8 110 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 A8MVM7 634 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 PIAS2O75928 621 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 GLSO94925 669 aaPredicted RBP12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 POLR2HP52434 150 aaKnown RBP12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 DYRK1AQ13627 763 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 ESCO2Q56NI9 601 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 KLHL24Q6TFL4 600 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 LRRTM1Q86UE6 522 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 GALNT16Q8N428 558 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 TEX19Q8NA77 164 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 SLC39A7Q92504 469 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 ZNF578Q96N58 590 aaPredicted RBP12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 OR8B4Q96RC9 309 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 PPP4R1LQ9P1A2 415 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 MRPS18BQ9Y676 258 aaKnown RBP12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 A0A1B0GX78 115 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 SLC22A23A1A5C7 686 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 BCAT2O15382 392 aaPredicted RBP12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 OR2J2O76002 312 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 KLK2P20151 261 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 HSD11B1P28845 292 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 RNF4P78317 190 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 SGCAQ16586 387 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 GPR139Q6DWJ6 353 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 LIX1LQ8IVB5 337 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 WDFY1Q8IWB7 410 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 ARHGEF39Q8N4T4 335 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 C17orf50Q8WW18 174 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 PMM1Q92871 262 aa12.27□□□□□ -0.45
PRPF40B-209ENST00000548825 SLC19A3Q9BZV2 496 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms