RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 SURF4O15260 269 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 IFNGP01579 166 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 HLA-DQA2P01906 255 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 SERPINA5P05154 406 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 SOD3P08294 240 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 PSKH1P11801 424 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 ZNF3P17036 446 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 SPI1P17947 270 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 CD53P19397 219 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 PAX7P23759 505 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 DNASE1P24855 282 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 POLR2IP36954 125 aaKnown RBP11.1□□□□□ -0.63
VEGFA-224ENST00000523873 RPS27P42677 84 aaKnown RBP11.1□□□□□ -0.63
VEGFA-224ENST00000523873 TEKQ02763 1124 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 PTGES3Q15185 160 aaKnown RBP11.1□□□□□ -0.63
VEGFA-224ENST00000523873 KRT80Q6KB66 452 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 CORO6Q6QEF8 472 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 DPPA2Q7Z7J5 298 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 C10orf67Q8IYJ2 551 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 DEPDC4Q8N2C3 294 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 PARP8Q8N3A8 854 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 ZNF611Q8N823 705 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 SLC30A7Q8NEW0 376 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 SLC26A10Q8NG04 563 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 CCL19Q99731 98 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 NMNAT2Q9BZQ4 307 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 RIBC2Q9H4K1 309 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 TVP23BQ9NYZ1 205 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 ASH2LQ9UBL3 628 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 LAMP3Q9UQV4 416 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 POLR1DQ9Y2S0 133 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 APCP25054 2843 aa11.1□□□□□ -0.63
VEGFA-224ENST00000523873 CENPEQ02224 2701 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 ITPR2Q14571 2701 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 POLQO75417 2590 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 ARID1AO14497 2285 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 IQCMA0A1B0GVH7 501 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 C12orf71A8MTZ7 269 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 DANCRP0C864 163 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 FAM157BP0CG42 384 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 ZNF35P13682 527 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 CCNOP22674 350 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 FABP6P51161 128 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 SLC25A1P53007 311 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 PLP2Q04941 152 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 SNTB2Q13425 540 aaKnown RBP11.09□□□□□ -0.63
VEGFA-224ENST00000523873 DAG1Q14118 895 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 KCNMB1Q16558 191 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 MSMPQ1L6U9 139 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 CCDC92Q53HC0 331 aaPredicted RBP11.09□□□□□ -0.63
VEGFA-224ENST00000523873 PLBD1Q6P4A8 553 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 C20orf204Q6ZNR8 217 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 CBR4Q8N4T8 237 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 ZNF511Q8NB15 262 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 BBS1Q8NFJ9 593 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 OR2T4Q8NH00 348 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 SMAP2Q8WU79 429 aaPredicted RBP11.09□□□□□ -0.63
VEGFA-224ENST00000523873 SLC29A1Q99808 456 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 DHRS9Q9BPW9 319 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 OR51V1Q9H2C8 321 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 CDH20Q9HBT6 801 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 MOV10Q9HCE1 1003 aaKnown RBP11.09□□□□□ -0.63
VEGFA-224ENST00000523873 HINT3Q9NQE9 182 aaKnown RBP11.09□□□□□ -0.63
VEGFA-224ENST00000523873 TIMM10BQ9Y5J6 103 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 LHFPL6Q9Y693 200 aa11.09□□□□□ -0.63
VEGFA-224ENST00000523873 PRRC2AP48634 2157 aaKnown RBP11.09□□□□□ -0.63
VEGFA-224ENST00000523873 LOC100509620A0A075B734 347 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 ZAR1LA6NP61 321 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 RER1O15258 196 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 PRKYO43930 277 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 GPRIN2O60269 458 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 DOK2O60496 412 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 HMGN1P05114 100 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 STOMP27105 288 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 APLNRP35414 380 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 THBS4P35443 961 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 LSM6P62312 80 aaKnown RBP11.08□□□□□ -0.64
VEGFA-224ENST00000523873 ESRRGP62508 458 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 GLO1Q04760 184 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 AQP6Q13520 282 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 RCN1Q15293 331 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 SNAPC1Q16533 368 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 TBC1D28Q2M2D7 210 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 ZIK1Q3SY52 487 aaPredicted RBP11.08□□□□□ -0.64
VEGFA-224ENST00000523873 LINC01590Q5TEZ4 76 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 SLX4IPQ5VYV7 408 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 TMEM154Q6P9G4 183 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 BCDIN3DQ7Z5W3 292 aaKnown RBP11.08□□□□□ -0.64
VEGFA-224ENST00000523873 CPOQ8IVL8 374 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 OR10H5Q8NGA6 315 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 OR6K6Q8NGW6 343 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 SLC7A6Q92536 515 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 PTP4A1Q93096 173 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 POM121L2Q96KW2 1035 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 RBM4BQ9BQ04 359 aaKnown RBP11.08□□□□□ -0.64
VEGFA-224ENST00000523873 WDR76Q9H967 626 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 FBXL3Q9UKT7 428 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 PDZD2O15018 2839 aa11.08□□□□□ -0.64
VEGFA-224ENST00000523873 C5orf49A4QMS7 147 aa11.07□□□□□ -0.64
VEGFA-224ENST00000523873 PRR23D1E9PI22 279 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms