RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 NUP98P52948 1817 aa3.84□□□□□ -1.8
HMGB1P3-201ENST00000502802 TRBV9A0A0B4J1U6 114 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 ERVV-1B6SEH8 477 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 MRPS12O15235 138 aaKnown RBP3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 EEDO75530 441 aaKnown RBP3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 ALDOBP05062 364 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 MRPL19P49406 292 aaKnown RBP3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 DSCR10P59022 87 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 WDR43Q15061 677 aaKnown RBP eCLIP3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 VAX1Q5SQQ9 334 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 ANKRD26P1Q6NSI1 321 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 CNIH2Q6PI25 160 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 Q6ZR54 194 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 RFLNAQ6ZTI6 216 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 ZNF321PQ8N8H1 164 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 OR52K1Q8NGK4 314 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 SLC7A13Q8TCU3 470 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 ARPC1AQ92747 370 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 FRAT1Q92837 279 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 UCN3Q969E3 161 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 C16orf74Q96GX8 76 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 FCRL1Q96LA6 429 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 PYGO2Q9BRQ0 406 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 OR51J1Q9H342 316 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 TMEM165Q9HC07 324 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 RPS10P5Q9NQ39 176 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 CLCF1Q9UBD9 225 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 PEF1Q9UBV8 284 aaKnown RBP3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 CNTNAP1P78357 1384 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 TNRC6CQ9HCJ0 1690 aaKnown RBP3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 TIAM2Q8IVF5 1701 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 WDR90Q96KV7 1748 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 ARFGEF2Q9Y6D5 1785 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 SLX4Q8IY92 1834 aa3.83□□□□□ -1.8
HMGB1P3-201ENST00000502802 SCN7AQ01118 1682 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 USP42Q9H9J4 1324 aaKnown RBP3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 ARPC4-TTLL3A0A0A6YYG9 625 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 A0A0G2JLM5 398 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 KBTBD11-OT1A0A1B0GTJ5 212 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 BCKDHBP21953 392 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 BTCP35070 178 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 CDKN1BP46527 198 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 SUB1P53999 127 aaKnown RBP eCLIP3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 EIF3EP60228 445 aaKnown RBP3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 ZNF92Q03936 586 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 ECH1Q13011 328 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 SLC39A6Q13433 755 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 ITIH4Q14624 930 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 NSDHLQ15738 373 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 XKR4Q5GH76 650 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 CASC10Q5T4H9 136 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 PLCXD3Q63HM9 321 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 P2RY8Q86VZ1 359 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 PNKDQ8N490 385 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 FANK1Q8TC84 345 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 GPX8Q8TED1 209 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 ZNF75CPQ92670 426 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 RPUSD4Q96CM3 377 aaKnown RBP3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 LYRM4Q9HD34 91 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 TNFRSF19Q9NS68 423 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 XCL2Q9UBD3 114 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 CLN8Q9UBY8 286 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 NEUROG3Q9Y4Z2 214 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 SLC25A15Q9Y619 301 aa3.82□□□□□ -1.8
HMGB1P3-201ENST00000502802 MMP23AO75900 390 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 CLPXO76031 633 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 FGFR1OPO95684 399 aaKnown RBP3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 ICAM2P13598 275 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 SLC11A1P49279 550 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 TIMM10P62072 90 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 ADARB1P78563 741 aaKnown RBP3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 GPNMBQ14956 572 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 SLC1A5Q15758 541 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 NRF1Q16656 503 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 AGBL2Q5U5Z8 902 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 TTC23LQ6PF05 361 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 SCARA5Q6ZMJ2 495 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 THOC6Q86W42 341 aaKnown RBP3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 ZADH2Q8N4Q0 377 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 HSD17B11Q8NBQ5 300 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 NEIL3Q8TAT5 605 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 CAPSLQ8WWF8 208 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 MAGEB18Q96M61 343 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 DEFB127Q9H1M4 99 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 SRMSQ9H3Y6 488 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 CLSTN2Q9H4D0 955 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 CHRAC1Q9NRG0 131 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 AHSPQ9NZD4 102 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 ING4Q9UNL4 249 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 ZNF256Q9Y2P7 627 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 CDH10Q9Y6N8 788 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 LAMB4A4D0S4 1761 aa3.81□□□□□ -1.8
HMGB1P3-201ENST00000502802 KCNE1BA0A087WTH5 132 aa3.8□□□□□ -1.8
HMGB1P3-201ENST00000502802 PSMB11A5LHX3 300 aa3.8□□□□□ -1.8
HMGB1P3-201ENST00000502802 USP27XA6NNY8 438 aa3.8□□□□□ -1.8
HMGB1P3-201ENST00000502802 A8MUA0 341 aa3.8□□□□□ -1.8
HMGB1P3-201ENST00000502802 E7ENQ6 273 aa3.8□□□□□ -1.8
HMGB1P3-201ENST00000502802 BOLA2-SMG1P6H3BVE0 249 aa3.8□□□□□ -1.8
HMGB1P3-201ENST00000502802 EIF4E2O60573 245 aaKnown RBP3.8□□□□□ -1.8
HMGB1P3-201ENST00000502802 SERPINA5P05154 406 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms