RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 P2RX1P51575 399 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 CSNK1G2P78368 415 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 PDLIM3Q53GG5 364 aaPredicted RBP18.02■□□□□ 0.48
SHANK1-203ENST00000391813 RSPO2Q6UXX9 243 aaPredicted RBP18.02■□□□□ 0.48
SHANK1-203ENST00000391813 LYG2Q86SG7 212 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 BAGE3Q86Y29 109 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 BAGE2Q86Y30 109 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 HS3ST3A1Q9Y663 406 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 HMSDA8MTL9 139 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 C17orf112F2Z3M2 114 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 SLC6A1P30531 599 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 MLC1Q15049 377 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 CCSMST1Q4G0I0 132 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 ZNF628Q5EBL2 1059 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 CYHR1Q6ZMK1 362 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 MSRB3Q8IXL7 192 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 ZNF808Q8N4W9 903 aaPredicted RBP18.02■□□□□ 0.48
SHANK1-203ENST00000391813 LMNTD1Q8N9Z9 388 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 OR4C16Q8NGL9 310 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 OR6K3Q8NGY3 331 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 ARRDC3Q96B67 414 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 UHRF2Q96PU4 802 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 OR5B2Q96R09 309 aa18.02■□□□□ 0.48
SHANK1-203ENST00000391813 RNF212BA8MTL3 300 aa18.02■□□□□ 0.47
SHANK1-203ENST00000391813 CD27P26842 260 aa18.02■□□□□ 0.47
SHANK1-203ENST00000391813 CSF2RBP32927 897 aa18.02■□□□□ 0.47
SHANK1-203ENST00000391813 PSMB3P49720 205 aa18.02■□□□□ 0.47
SHANK1-203ENST00000391813 SELENOVP59797 346 aa18.02■□□□□ 0.47
SHANK1-203ENST00000391813 MPPED2Q15777 294 aa18.02■□□□□ 0.47
SHANK1-203ENST00000391813 TMEM71Q6P5X7 295 aa18.02■□□□□ 0.47
SHANK1-203ENST00000391813 CAMKMTQ7Z624 323 aa18.02■□□□□ 0.47
SHANK1-203ENST00000391813 RHOFQ9HBH0 211 aa18.02■□□□□ 0.47
SHANK1-203ENST00000391813 PTPRZ1P23471 2315 aaPredicted RBP18.02■□□□□ 0.47
SHANK1-203ENST00000391813 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.02■□□□□ 0.47
SHANK1-203ENST00000391813 ZNF354AO60765 605 aaPredicted RBP18.02■□□□□ 0.47
SHANK1-203ENST00000391813 SLC2A10O95528 541 aa18.02■□□□□ 0.47
SHANK1-203ENST00000391813 NME1P15531 152 aaKnown RBP18.02■□□□□ 0.47
SHANK1-203ENST00000391813 MAP2K6P52564 334 aa18.02■□□□□ 0.47
SHANK1-203ENST00000391813 ZNF133P52736 654 aaPredicted RBP18.02■□□□□ 0.47
SHANK1-203ENST00000391813 HMGA2P52926 109 aa18.02■□□□□ 0.47
SHANK1-203ENST00000391813 ST3GAL2Q16842 350 aa18.02■□□□□ 0.47
SHANK1-203ENST00000391813 CST9LP1Q5W188 147 aa18.02■□□□□ 0.47
SHANK1-203ENST00000391813 OLIG3Q7RTU3 272 aa18.02■□□□□ 0.47
SHANK1-203ENST00000391813 CLEC1AQ8NC01 280 aa18.02■□□□□ 0.47
SHANK1-203ENST00000391813 SULT2B1O00204 365 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 XRCC3O43542 346 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 CAMK2BQ13554 666 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 TMEM201Q5SNT2 666 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 ATPAF1Q5TC12 328 aaPredicted RBP18.01■□□□□ 0.47
SHANK1-203ENST00000391813 MRPL21Q7Z2W9 205 aaKnown RBP18.01■□□□□ 0.47
SHANK1-203ENST00000391813 PFN4Q8NHR9 129 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 FGGYQ96C11 551 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 PDFQ9HBH1 243 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 GALR3O60755 368 aaPredicted RBP18.01■□□□□ 0.47
SHANK1-203ENST00000391813 FCGR2CP31995 323 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 RAB11AP62491 216 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 GSG1Q2KHT4 349 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 TMEM52BQ4KMG9 183 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 FAM69BQ5VUD6 431 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 C11orf87Q6NUJ2 197 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 FAAP20Q6NZ36 180 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 PRR22Q8IZ63 422 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 RASD2Q96D21 266 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 SDSLQ96GA7 329 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 OR6C76A6NM76 312 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 UPK1AO00322 258 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 BCKDHBP21953 392 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 RPL12P30050 165 aaKnown RBP18.01■□□□□ 0.47
SHANK1-203ENST00000391813 MTCP1P56278 107 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 TMEM81Q6P7N7 255 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 ANGPTL5Q86XS5 388 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 ANKRD9Q96BM1 317 aaPredicted RBP18.01■□□□□ 0.47
SHANK1-203ENST00000391813 KLK11Q9UBX7 282 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 VDAC3Q9Y277 283 aa18.01■□□□□ 0.47
SHANK1-203ENST00000391813 TMEM265A0A087WTH1 108 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 INHBBP09529 407 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 FAM57BQ71RH2 274 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 SYT9Q86SS6 491 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 MCATQ8IVS2 390 aaKnown RBP18■□□□□ 0.47
SHANK1-203ENST00000391813 OR1S2Q8NGQ3 325 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 VN1R3Q9BXE9 311 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 RAB9BQ9NP90 201 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 P2RY10O00398 339 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 NME2P1O60361 137 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 FCGR2AP12318 317 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 FAM199XQ6PEV8 388 aaPredicted RBP18■□□□□ 0.47
SHANK1-203ENST00000391813 BRICD5Q6PL45 260 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 CORO6Q6QEF8 472 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 ADAMTSL4Q6UY14 1074 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 STAC2Q6ZMT1 411 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 GOT1L1Q8NHS2 421 aaPredicted RBP18■□□□□ 0.47
SHANK1-203ENST00000391813 CGGBP1Q9UFW8 167 aaPredicted RBP18■□□□□ 0.47
SHANK1-203ENST00000391813 ZBTB32Q9Y2Y4 487 aaPredicted RBP18■□□□□ 0.47
SHANK1-203ENST00000391813 DBHP09172 617 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 RAB4AP20338 218 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 ARHGAP11BQ3KRB8 267 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 RPUSD3Q6P087 351 aaKnown RBP18■□□□□ 0.47
SHANK1-203ENST00000391813 FJX1Q86VR8 437 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 STPG2Q8N412 459 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 ZNF611Q8N823 705 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms