RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 SMARCD3Q6STE5 483 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 THSD4Q6ZMP0 1018 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 DPY19L2P2Q6ZN68 376 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 MYPOPQ86VE0 399 aaPredicted RBP11.55□□□□□ -0.56
CTSA-213ENST00000606782 CLDN22Q8N7P3 220 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 ATG16L2Q8NAA4 619 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 ICA1LQ8NDH6 482 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 SPATA3Q8NHX4 192 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 DNAJC9Q8WXX5 260 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 ZNF75AQ96N20 296 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 GPX7Q96SL4 187 aaPredicted RBP11.55□□□□□ -0.56
CTSA-213ENST00000606782 DOK1Q99704 481 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 OR52D1Q9H346 318 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 SMURF2Q9HAU4 748 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 NRIP3Q9NQ35 241 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 INIPQ9NRY2 104 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 NKX1-2Q9UD57 310 aaPredicted RBP11.55□□□□□ -0.56
CTSA-213ENST00000606782 FKBP7Q9Y680 259 aa11.55□□□□□ -0.56
CTSA-213ENST00000606782 DNHD1Q96M86 4753 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 LOC390937A0A1W2PQ73 354 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 TMEM129A0AVI4 362 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 VSTM5A8MXK1 200 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 H0YHG0 523 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 M0R3G1 203 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 LY6HO94772 140 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 F13BP05160 661 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 CD14P08571 375 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 IFNGR1P15260 489 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 CTXN1P60606 82 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 POU3F1Q03052 451 aaPredicted RBP11.54□□□□□ -0.56
CTSA-213ENST00000606782 TAF11Q15544 211 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 ARMC4Q5T2S8 1044 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 RPL13AP3Q6NVV1 102 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 ZNF620Q6ZNG0 422 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 SLC35D2Q76EJ3 337 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 MDP1Q86V88 176 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 WDFY1Q8IWB7 410 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 OR6X1Q8NH79 312 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 SAMD8Q96LT4 415 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 C9orf16Q9BUW7 83 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 EMC6Q9BV81 110 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 TXNIPQ9H3M7 391 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 ZNF556Q9HAH1 456 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 B3GAT2Q9NPZ5 323 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 MED29Q9NX70 200 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 USE1Q9NZ43 259 aa11.54□□□□□ -0.56
CTSA-213ENST00000606782 TMEFF2Q9UIK5 374 aaPredicted RBP11.54□□□□□ -0.56
CTSA-213ENST00000606782 ZNF346Q9UL40 294 aaKnown RBP11.54□□□□□ -0.56
CTSA-213ENST00000606782 RRP15Q9Y3B9 282 aaKnown RBP11.54□□□□□ -0.56
CTSA-213ENST00000606782 A0A1W2PRG6 482 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 MCIDASD6RGH6 385 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 CASQ2O14958 399 aaPredicted RBP11.53□□□□□ -0.56
CTSA-213ENST00000606782 ARPC3O15145 178 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 TXNDC12O95881 172 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 BCL10O95999 233 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 IGHMP01871 453 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 IGFBP1P08833 259 aaPredicted RBP11.53□□□□□ -0.56
CTSA-213ENST00000606782 IGHV4-31P0DP07 118 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 OSMP13725 252 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 APEHP13798 732 aaKnown RBP11.53□□□□□ -0.56
CTSA-213ENST00000606782 NPR2P20594 1047 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 NR4A1P22736 598 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 THBS4P35443 961 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 NR4A2P43354 598 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 IDH3GP51553 393 aaPredicted RBP11.53□□□□□ -0.56
CTSA-213ENST00000606782 IL1RL1Q01638 556 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 SLC34A1Q06495 639 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 CHRFAM7AQ494W8 412 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 CYB5R2Q6BCY4 276 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 ZBTB49Q6ZSB9 765 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 CXXC5Q7LFL8 322 aaKnown RBP11.53□□□□□ -0.56
CTSA-213ENST00000606782 FAM122BQ7Z309 247 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 PARP8Q8N3A8 854 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 SLC29A1Q99808 456 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 CIB1Q99828 191 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 RBM4BQ9BQ04 359 aaKnown RBP11.53□□□□□ -0.56
CTSA-213ENST00000606782 RBM4Q9BWF3 364 aaKnown RBP11.53□□□□□ -0.56
CTSA-213ENST00000606782 PLA2G12AQ9BZM1 189 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 EGLN3Q9H6Z9 239 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 RNPEPL1Q9HAU8 725 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 ZNF224Q9NZL3 707 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 POFUT2Q9Y2G5 429 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 CDH10Q9Y6N8 788 aa11.53□□□□□ -0.56
CTSA-213ENST00000606782 ZNF726A6NNF4 738 aa11.52□□□□□ -0.57
CTSA-213ENST00000606782 BHLHE40O14503 412 aa11.52□□□□□ -0.57
CTSA-213ENST00000606782 SOCS2O14508 198 aa11.52□□□□□ -0.57
CTSA-213ENST00000606782 IMPA2O14732 288 aa11.52□□□□□ -0.57
CTSA-213ENST00000606782 IDH3BO43837 385 aa11.52□□□□□ -0.57
CTSA-213ENST00000606782 MITFO75030 526 aaPredicted RBP11.52□□□□□ -0.57
CTSA-213ENST00000606782 IFNA2P01563 188 aa11.52□□□□□ -0.57
CTSA-213ENST00000606782 HLA-HP01893 362 aa11.52□□□□□ -0.57
CTSA-213ENST00000606782 ALPLP05186 524 aa11.52□□□□□ -0.57
CTSA-213ENST00000606782 ZNF35P13682 527 aa11.52□□□□□ -0.57
CTSA-213ENST00000606782 ZNF14P17017 642 aaPredicted RBP11.52□□□□□ -0.57
CTSA-213ENST00000606782 GIFP27352 417 aa11.52□□□□□ -0.57
CTSA-213ENST00000606782 SLC6A6P31641 620 aa11.52□□□□□ -0.57
CTSA-213ENST00000606782 RPL4P36578 427 aaKnown RBP11.52□□□□□ -0.57
CTSA-213ENST00000606782 GIPRP48546 466 aa11.52□□□□□ -0.57
CTSA-213ENST00000606782 EVX1P49640 407 aa11.52□□□□□ -0.57
CTSA-213ENST00000606782 ALDH3A2P51648 485 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms