RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	TSEN15	Q8WW01	171 aa	Known RBP	10.63	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	LCN9	Q8WX39	176 aa		10.63	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	FAM46B	Q96A09	425 aa		10.63	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	FAM131C	Q96AQ9	280 aa		10.63	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	NMNAT3	Q96T66	252 aa		10.63	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	S100A13	Q99584	98 aa		10.63	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	ZFYVE21	Q9BQ24	234 aa		10.63	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	C1QTNF6	Q9BXI9	259 aa		10.63	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	S1PR5	Q9H228	398 aa		10.63	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	PRMT8	Q9NR22	394 aa	Predicted RBP	10.63	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	ASF1B	Q9NVP2	202 aa		10.63	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	HCST	Q9UBK5	93 aa		10.63	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	KCNE5	Q9UJ90	142 aa		10.63	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	HHLA2	Q9UM44	414 aa		10.63	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	TIMM10B	Q9Y5J6	103 aa		10.63	□□□□□ -0.71
U2AF1L4-221	ENST00000601236		A0A0G2JN53	185 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	OR6C74	A6NCV1	312 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	ZNF860	A6NHJ4	632 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	C4orf51	C9J302	202 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	CYR61	O00622	381 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	TNFRSF10C	O14798	259 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	NUPL2	O15504	423 aa	Known RBP	10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	EIF1B	O60739	113 aa	Known RBP	10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	F10	P00742	488 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	CST4	P01036	141 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	CRYBA1	P05813	215 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	GYPB	P06028	91 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	RCC1	P18754	421 aa	Predicted RBP	10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	S1PR1	P21453	382 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	IGFALS	P35858	605 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	PSMB10	P40306	273 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	PBX2	P40425	430 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	EIF1	P41567	113 aa	Known RBP	10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	SULT1A2	P50226	295 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	RIDA	P52758	137 aa	Known RBP	10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	UCP2	P55851	309 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	HTRA4	P83105	476 aa	Predicted RBP	10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	FAM3A	P98173	230 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	PMPCA	Q10713	525 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	SGCG	Q13326	291 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	GPR18	Q14330	331 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	ZNF750	Q32MQ0	723 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	TMEM225	Q6GV28	225 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	OPN5	Q6U736	354 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	RNF44	Q7L0R7	432 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	OLIG3	Q7RTU3	272 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	MDGA2	Q7Z553	956 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	SYT9	Q86SS6	491 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	C2orf73	Q8N5S3	287 aa	Predicted RBP	10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	FRMD1	Q8N878	549 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	OR51D1	Q8NGF3	324 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	GRHL3	Q8TE85	626 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	COL26A1	Q96A83	441 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	SYT4	Q9H2B2	425 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	MOB1A	Q9H8S9	216 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	LMAN1L	Q9HAT1	526 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	BCO1	Q9HAY6	547 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	USP36	Q9P275	1121 aa	Known RBP	10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	THAP10	Q9P2Z0	257 aa	Predicted RBP	10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	GHRL	Q9UBU3	117 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	SUSD2	Q9UGT4	822 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	PILRA	Q9UKJ1	303 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	IKZF2	Q9UKS7	526 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	DMRT1	Q9Y5R6	373 aa		10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	MUC22	E2RYF6	1773 aa	Predicted RBP	10.62	□□□□□ -0.71
U2AF1L4-221	ENST00000601236		A0A1W2PPC1	479 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	TMEM72	A0PK05	275 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	MEX3A	A1L020	520 aa	Known RBP	10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236		A6NIZ1	184 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	COLCA2	A8K830	154 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	GPR31	O00270	319 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	PEX12	O00623	359 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	XKRY	O14609	159 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	PPM1D	O15297	605 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	LAT	O43561	262 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	FADS1	O60427	444 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	MOSPD3	O75425	235 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	STK17B	O94768	372 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	APBB3	O95704	486 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	CSTA	P01040	98 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	IFNA17	P01571	189 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	RHO	P08100	348 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	FAM157C	P0CG43	387 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	ABCD3	P28288	659 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	RAP1B	P61224	184 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	RAP1A	P62834	184 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	HTRA3	P83110	453 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	SP3	Q02447	781 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	SRSF5	Q13243	272 aa	Known RBP	10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	C2orf68	Q2NKX9	166 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	EIF2S3L	Q2VIR3	472 aa	Known RBP	10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	KIRREL2	Q6UWL6	708 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	ATG4D	Q86TL0	474 aa	Predicted RBP	10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	AVL9	Q8NBF6	648 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	RELL2	Q8NC24	303 aa	Predicted RBP	10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	OR1J1	Q8NGS3	322 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	OR13C8	Q8NGS7	320 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	RHBDD1	Q8TEB9	315 aa		10.61	□□□□□ -0.71
U2AF1L4-221	ENST00000601236	C3orf49	Q96BT1	292 aa		10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms