RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 PAQR5Q9NXK6 330 aaPredicted RBP13.31□□□□□ -0.28
SREK1-209ENST00000520953 GALNT8Q9NY28 637 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 CCDC59Q9P031 241 aaKnown RBP13.31□□□□□ -0.28
SREK1-209ENST00000520953 KLHL9Q9P2J3 617 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 OR14I1A6ND48 311 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 TTLL8A6PVC2 850 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 MAGEB4O15481 346 aaPredicted RBP13.31□□□□□ -0.28
SREK1-209ENST00000520953 SBK2P0C263 348 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 CSNK1A1P48729 337 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 RAB40BQ12829 278 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 ST3GAL2Q16842 350 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 KLHL22Q53GT1 634 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 FAM205BPQ63HN1 556 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 DCDC5Q6ZRR9 648 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 SSX6Q7RTT6 188 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 LHFPL3Q86UP9 236 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 TMEM54Q969K7 222 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 ZNF649Q9BS31 505 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 C12orf49Q9H741 205 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 RNF122Q9H9V4 155 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 ETAA1Q9NY74 926 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 FOXD3Q9UJU5 478 aaPredicted RBP13.31□□□□□ -0.28
SREK1-209ENST00000520953 COPS3Q9UNS2 423 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 EXOGQ9Y2C4 368 aaKnown RBP13.31□□□□□ -0.28
SREK1-209ENST00000520953 KLHDC2Q9Y2U9 406 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 FAM215AQ9Y5M1 114 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 FKBP7Q9Y680 259 aa13.31□□□□□ -0.28
SREK1-209ENST00000520953 CACNA1CQ13936 2221 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 SHANK1Q9Y566 2161 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 PRR32B1ATL7 298 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 ATP6V1E1P36543 226 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 MLLT11Q13015 90 aaPredicted RBP13.3□□□□□ -0.28
SREK1-209ENST00000520953 KRTCAP3Q53RY4 240 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 P4HA3Q7Z4N8 544 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 SNX29P2Q8IUI4 249 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 CENPSQ8N2Z9 138 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 OR6N1Q8NGY5 312 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 CHPT1Q8WUD6 406 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 ADAD1Q96M93 576 aaKnown RBP13.3□□□□□ -0.28
SREK1-209ENST00000520953 SNX18Q96RF0 628 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 BCO1Q9HAY6 547 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 NDUFB11Q9NX14 153 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 GLTPQ9NZD2 209 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 NOSIPQ9Y314 301 aaKnown RBP13.3□□□□□ -0.28
SREK1-209ENST00000520953 SNTNA6NMZ2 147 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 AGTR1P30556 359 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 CRYBB2P43320 205 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 FOXG1P55316 489 aaPredicted RBP13.3□□□□□ -0.28
SREK1-209ENST00000520953 IFITM3Q01628 133 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 FOXF2Q12947 444 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 TSPO2Q5TGU0 170 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 SLC25A47Q6Q0C1 308 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 GFRALQ6UXV0 394 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 NCCRP1Q6ZVX7 275 aaPredicted RBP13.3□□□□□ -0.28
SREK1-209ENST00000520953 TIGD4Q8IY51 512 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 C20orf196Q8IYI0 205 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 OR10H4Q8NGA5 316 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 TRMT61AQ96FX7 289 aaKnown RBP13.3□□□□□ -0.28
SREK1-209ENST00000520953 C6orf62Q9GZU0 229 aaPredicted RBP13.3□□□□□ -0.28
SREK1-209ENST00000520953 FAIMQ9NVQ4 179 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 SH3BGRL2Q9UJC5 107 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 ZNF175Q9Y473 711 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 UGT2A1Q9Y4X1 527 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 A3GALT2U3KPV4 340 aa13.3□□□□□ -0.28
SREK1-209ENST00000520953 C12orf71A8MTZ7 269 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 ERVH48-1M5A8F1 160 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 PFDN1O60925 122 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 TOXO94900 526 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 HLA-DQA2P01906 255 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 YES1P07947 543 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 LIMS3P0CW19 117 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 LIMS4P0CW20 117 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 GAAP10253 952 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 MYL12AP19105 171 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 SIRPAP78324 504 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 GGTLC2Q14390 218 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 RGS21Q2M5E4 152 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 SLC35D3Q5M8T2 416 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 OR2G6Q5TZ20 316 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 LIPKQ5VXJ0 399 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 MCEMP1Q8IX19 187 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 PHC2Q8IXK0 858 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 INTS12Q96CB8 462 aaKnown RBP13.29□□□□□ -0.28
SREK1-209ENST00000520953 RBP7Q96R05 134 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 CNN2Q99439 309 aaKnown RBP13.29□□□□□ -0.28
SREK1-209ENST00000520953 HAO2Q9NYQ3 351 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 TINAGQ9UJW2 476 aa13.29□□□□□ -0.28
SREK1-209ENST00000520953 A0A1W2PPL8 197 aa13.28□□□□□ -0.28
SREK1-209ENST00000520953 IRGMA1A4Y4 181 aa13.28□□□□□ -0.28
SREK1-209ENST00000520953 WNT11O96014 354 aa13.28□□□□□ -0.28
SREK1-209ENST00000520953 ABOP16442 354 aa13.28□□□□□ -0.28
SREK1-209ENST00000520953 RNPS1Q15287 305 aaKnown RBP13.28□□□□□ -0.28
SREK1-209ENST00000520953 THEM4Q5T1C6 240 aa13.28□□□□□ -0.28
SREK1-209ENST00000520953 FAM57AQ8TBR7 257 aa13.28□□□□□ -0.28
SREK1-209ENST00000520953 TMEM45BQ96B21 275 aa13.28□□□□□ -0.28
SREK1-209ENST00000520953 AMELYQ99218 206 aa13.28□□□□□ -0.28
SREK1-209ENST00000520953 EMC7Q9NPA0 242 aa13.28□□□□□ -0.28
SREK1-209ENST00000520953 SLC7A10Q9NS82 523 aa13.28□□□□□ -0.28
SREK1-209ENST00000520953 PRSS50Q9UI38 385 aa13.28□□□□□ -0.28
SREK1-209ENST00000520953 RCE1Q9Y256 329 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms