RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Upp2Q8CGR7 320 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Vmn1r32Q8R2D9 302 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Olfr732Q8VFT5 308 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Ca7Q9ERQ8 264 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Tspan32Q9JHH2 256 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Deaf1Q9Z1T5 566 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Olfr1493-ps1A0A140LHU2 316 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Gm8660K7N6J2 305 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Rad52P43352 420 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Cldn18P56857 264 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Nr4a2Q06219 598 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Slc25a33Q3TZX3 320 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Nxpe2Q3U095 558 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Plpp5Q3UMZ3 260 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Prtn3Q61096 254 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Zrsr1Q64707 428 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Rrm2bQ6PEE3 351 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Mfsd8Q8BH31 519 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 QpctlQ8BH73 383 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Lkaaear1Q8BIG2 198 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Apoa5Q8C7G5 368 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 AcppQ8CE08 381 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Sf3b4Q8QZY9 424 aaKnown RBP13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Vmn1r212Q8R268 357 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Vmn1r208Q8R275 308 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Tmem246Q91YV9 403 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Tinagl1Q99JR5 466 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Sesn3Q9CYP7 492 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Q9D4W2 315 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Trappc4Q9ES56 219 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Wif1Q9WUA1 379 aa13.35□□□□□ -0.27
Nup88-202ENSMUST00000108530 Ighv6-6A0A075B5T3 119 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Igkv9-124A0A0G2JDR3 117 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Gm17949A0A1B0GRV7 212 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Rnf217D3YYI7 515 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Mrap2D3Z1Q2 207 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Wdfy1E9Q4P1 410 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Fkbp8O35465 402 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 BckdkO55028 412 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 VtnP29788 478 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Tgtp2Q3T9E4 415 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Cdk10Q3UMM4 360 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Tspan7Q62283 249 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Tgtp1Q62293 415 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Il11ra1Q64385 432 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 ScocQ78YZ6 125 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Olfr884Q7TRE1 309 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 SnupnQ80W37 358 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Reep4Q8K072 257 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Vmn1r23Q8R2D0 302 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Tmcc3Q8R310 477 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Pafah2Q8VDG7 390 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Olfr826Q8VFU6 313 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Olfr825Q8VFU7 320 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Cacng6Q8VHW3 260 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 4931417E11RikQ9CR05 305 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Actl11Q9D5V1 1207 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Adam11Q9R1V4 773 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Aloxe3Q9WV07 711 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Vps13cQ8BX70 3748 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Celsr3Q91ZI0 3301 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Olfr239A0PK55 315 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Olfr547E9PXN3 311 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Olfr55K7N6Q1 315 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Bcat2O35855 393 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 CaskO70589 926 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Ccl22O88430 92 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Creg1O88668 220 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Avpr2O88721 371 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 C2cd4dP0CG09 341 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Fv1P70213 459 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Gm136Q3V037 328 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Klhdc2Q4G5Y1 406 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Olfr1282Q7TQY5 305 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 CblcQ80XL1 496 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Arhgap22Q8BL80 702 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Swi5Q8K3D3 89 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Olfr1143Q8VEU8 314 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Olfr1043Q8VFK4 314 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Lnx2Q91XL2 687 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Tmem123Q91Z22 195 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Zfp810Q99K45 461 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Dusp22Q99N11 184 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 PlgrktQ9D3P8 147 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Yipf5Q9EQQ2 257 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Fn3kQ9ER35 309 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Aqp9Q9JJJ3 295 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Pdcd1lg2Q9WUL5 247 aa13.34□□□□□ -0.27
Nup88-202ENSMUST00000108530 Trav12n-2A0A075B626 113 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Vmn1r9A2RST7 299 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Vmn1r137D3YTY1 307 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Vmn1r143E9PUW9 307 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Zfp712E9PXJ4 705 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Vmn1r157E9Q069 297 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Vmn1r139E9Q8L6 297 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Vmn1r112G3UY48 297 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Vmn1r135K9J7G0 307 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Vmn2r28L7N203 852 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Vmn1r125L7N227 307 aa13.33□□□□□ -0.28
Nup88-202ENSMUST00000108530 Vmn1r116L7N2A6 307 aa13.33□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms