RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W BNI5P53890 448 aaKnown RBP5.86□□□□□ -1.47
PDH1YPR002W HOT1Q03213 719 aa5.86□□□□□ -1.47
PDH1YPR002W PRP3Q03338 469 aaPredicted RBP5.86□□□□□ -1.47
PDH1YPR002W FUS2Q05670 677 aa5.86□□□□□ -1.47
PDH1YPR002W SKG3Q06315 1026 aa5.86□□□□□ -1.47
PDH1YPR002W MAG2Q06436 670 aaKnown RBP5.86□□□□□ -1.47
PDH1YPR002W YPR078CQ06813 372 aa5.86□□□□□ -1.47
PDH1YPR002W RIX7Q07844 837 aaKnown RBP5.86□□□□□ -1.47
PDH1YPR002W FAL1Q12099 399 aaKnown RBP5.86□□□□□ -1.47
PDH1YPR002W RPB2P08518 1224 aaKnown RBP5.85□□□□□ -1.47
PDH1YPR002W ILV6P25605 309 aaKnown RBP5.85□□□□□ -1.47
PDH1YPR002W CHS3P29465 1165 aa5.85□□□□□ -1.47
PDH1YPR002W NAM7P30771 971 aaKnown RBP5.85□□□□□ -1.47
PDH1YPR002W KAP122P32767 1081 aa5.85□□□□□ -1.47
PDH1YPR002W SMC1P32908 1225 aa5.85□□□□□ -1.47
PDH1YPR002W JNM1P36224 373 aa5.85□□□□□ -1.47
PDH1YPR002W PPS1P38148 807 aa5.85□□□□□ -1.47
PDH1YPR002W MMS21P38632 267 aa5.85□□□□□ -1.47
PDH1YPR002W GAA1P39012 614 aa5.85□□□□□ -1.47
PDH1YPR002W NUP82P40368 713 aa5.85□□□□□ -1.47
PDH1YPR002W SAP185P40856 1058 aa5.85□□□□□ -1.47
PDH1YPR002W HXT8P40886 569 aa5.85□□□□□ -1.47
PDH1YPR002W NBP1P52919 319 aaPredicted RBP5.85□□□□□ -1.47
PDH1YPR002W MTO1P53070 669 aa5.85□□□□□ -1.47
PDH1YPR002W SEC5P89102 971 aa5.85□□□□□ -1.47
PDH1YPR002W YMR187CQ03236 431 aa5.85□□□□□ -1.47
PDH1YPR002W UTP14Q04500 899 aaKnown RBP5.85□□□□□ -1.47
PDH1YPR002W PUS1Q12211 544 aaKnown RBP5.85□□□□□ -1.47
PDH1YPR002W NCA2Q12374 616 aa5.85□□□□□ -1.47
PDH1YPR002W ZRT2Q12436 422 aa5.85□□□□□ -1.47
PDH1YPR002W FRT1Q99332 602 aa5.85□□□□□ -1.47
PDH1YPR002W ACE2P21192 770 aa5.84□□□□□ -1.47
PDH1YPR002W TOS1P38288 455 aa5.84□□□□□ -1.47
PDH1YPR002W SIP3P38717 1229 aa5.84□□□□□ -1.47
PDH1YPR002W URB2P47108 1174 aa5.84□□□□□ -1.47
PDH1YPR002W SGM1P47166 707 aa5.84□□□□□ -1.47
PDH1YPR002W GUP1P53154 560 aa5.84□□□□□ -1.47
PDH1YPR002W SCW11P53189 542 aa5.84□□□□□ -1.47
PDH1YPR002W BUL2Q03758 920 aaKnown RBP5.84□□□□□ -1.47
PDH1YPR002W TDA9Q04545 1251 aa5.84□□□□□ -1.47
PDH1YPR002W CSR1Q06705 408 aaKnown RBP5.84□□□□□ -1.47
PDH1YPR002W KEL3Q08979 651 aaPredicted RBP5.84□□□□□ -1.47
PDH1YPR002W TAF10Q12030 206 aa5.84□□□□□ -1.47
PDH1YPR002W SPO21Q12411 609 aa5.84□□□□□ -1.47
PDH1YPR002W SMC6Q12749 1114 aa5.84□□□□□ -1.47
PDH1YPR002W CDC19P00549 500 aaKnown RBP5.84□□□□□ -1.48
PDH1YPR002W LEU1P07264 779 aaKnown RBP5.84□□□□□ -1.48
PDH1YPR002W ADH4P10127 382 aa5.84□□□□□ -1.48
PDH1YPR002W CAF20P12962 161 aaKnown RBP5.84□□□□□ -1.48
PDH1YPR002W PRE8P23639 250 aa5.84□□□□□ -1.48
PDH1YPR002W YME1P32795 747 aa5.84□□□□□ -1.48
PDH1YPR002W NIP100P33420 868 aa5.84□□□□□ -1.48
PDH1YPR002W YBR062CP38239 180 aa5.84□□□□□ -1.48
PDH1YPR002W OSH7P38755 437 aa5.84□□□□□ -1.48
PDH1YPR002W TMA22P47089 198 aaPredicted RBP5.84□□□□□ -1.48
PDH1YPR002W YJR142WP47173 342 aa5.84□□□□□ -1.48
PDH1YPR002W ENV11P53246 860 aa5.84□□□□□ -1.48
PDH1YPR002W ZPR1P53303 486 aaKnown RBP5.84□□□□□ -1.48
PDH1YPR002W SUB1P54000 292 aaKnown RBP5.84□□□□□ -1.48
PDH1YPR002W VPS16Q03308 798 aa5.84□□□□□ -1.48
PDH1YPR002W AIM33Q04516 312 aa5.84□□□□□ -1.48
PDH1YPR002W CSM3Q04659 317 aa5.84□□□□□ -1.48
PDH1YPR002W CMS1Q07897 291 aaKnown RBP5.84□□□□□ -1.48
PDH1YPR002W PEP5P12868 1029 aa5.83□□□□□ -1.48
PDH1YPR002W SRM1P21827 482 aa5.83□□□□□ -1.48
PDH1YPR002W SRO9P25567 434 aaKnown RBP5.83□□□□□ -1.48
PDH1YPR002W RAD5P32849 1169 aaPredicted RBP5.83□□□□□ -1.48
PDH1YPR002W HEK2P38199 381 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
PDH1YPR002W PES4P39684 611 aa5.83□□□□□ -1.48
PDH1YPR002W FIR1P40020 876 aa5.83□□□□□ -1.48
PDH1YPR002W LCP5P40079 357 aaPredicted RBP5.83□□□□□ -1.48
PDH1YPR002W TDA10P42938 290 aa5.83□□□□□ -1.48
PDH1YPR002W YJL181WP46987 611 aa5.83□□□□□ -1.48
PDH1YPR002W ILM1P47155 203 aa5.83□□□□□ -1.48
PDH1YPR002W MFM1Q02783 413 aa5.83□□□□□ -1.48
PDH1YPR002W TMA64Q04600 565 aaKnown RBP5.83□□□□□ -1.48
PDH1YPR002W VIP1Q06685 1146 aaKnown RBP5.83□□□□□ -1.48
PDH1YPR002W TSR1Q07381 788 aaKnown RBP5.83□□□□□ -1.48
PDH1YPR002W YDL176WQ12027 708 aa5.83□□□□□ -1.48
PDH1YPR002W AIM41Q12032 185 aa5.83□□□□□ -1.48
PDH1YPR002W TY1A-BLQ12266 440 aa5.83□□□□□ -1.48
PDH1YPR002W RIB2Q12362 591 aaKnown RBP5.83□□□□□ -1.48
PDH1YPR002W RAD3P06839 778 aa5.82□□□□□ -1.48
PDH1YPR002W PFK1P16861 987 aaKnown RBP5.82□□□□□ -1.48
PDH1YPR002W IME1P21190 360 aa5.82□□□□□ -1.48
PDH1YPR002W GSY1P23337 708 aa5.82□□□□□ -1.48
PDH1YPR002W SEC14P24280 304 aaKnown RBP5.82□□□□□ -1.48
PDH1YPR002W GBP2P25555 427 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
PDH1YPR002W SMY1P32364 656 aaKnown RBP5.82□□□□□ -1.48
PDH1YPR002W PLC1P32383 869 aa5.82□□□□□ -1.48
PDH1YPR002W BLI1P35727 113 aa5.82□□□□□ -1.48
PDH1YPR002W ESBP6P53918 673 aa5.82□□□□□ -1.48
PDH1YPR002W RPL22BP56628 122 aaKnown RBP5.82□□□□□ -1.48
PDH1YPR002W CUS1Q02554 436 aaPredicted RBP5.82□□□□□ -1.48
PDH1YPR002W TFB2Q02939 513 aa5.82□□□□□ -1.48
PDH1YPR002W YPL109CQ02981 657 aa5.82□□□□□ -1.48
PDH1YPR002W YMR018WQ04364 514 aa5.82□□□□□ -1.48
PDH1YPR002W SPC24Q04477 213 aa5.82□□□□□ -1.48
PDH1YPR002W FAR8Q05040 523 aa5.82□□□□□ -1.48
PDH1YPR002W YDR278CQ05612 105 aa5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms