RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W MMM1P41800 426 aa4.4□□□□□ -1.71
VPS27YNR006W SGM1P47166 707 aa4.4□□□□□ -1.71
VPS27YNR006W ASK10P48361 1146 aa4.4□□□□□ -1.71
VPS27YNR006W YAP1802P53309 568 aa4.4□□□□□ -1.71
VPS27YNR006W PTA1Q01329 785 aaPredicted RBP4.4□□□□□ -1.71
VPS27YNR006W PUF3Q07807 879 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
VPS27YNR006W RSC58Q07979 502 aa4.4□□□□□ -1.71
VPS27YNR006W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
VPS27YNR006W SSM4P40318 1319 aa4.4□□□□□ -1.71
VPS27YNR006W HCA4P20448 770 aaKnown RBP4.39□□□□□ -1.71
VPS27YNR006W PGM1P33401 570 aaKnown RBP4.39□□□□□ -1.71
VPS27YNR006W HSL7P38274 827 aa4.39□□□□□ -1.71
VPS27YNR006W APE4P38821 490 aa4.39□□□□□ -1.71
VPS27YNR006W RPN10P38886 268 aaKnown RBP4.39□□□□□ -1.71
VPS27YNR006W NIT3P49954 291 aa4.39□□□□□ -1.71
VPS27YNR006W ARA2Q04212 335 aa4.39□□□□□ -1.71
VPS27YNR006W SPN1Q06505 410 aaPredicted RBP4.39□□□□□ -1.71
VPS27YNR006W COQ4O13525 335 aa4.39□□□□□ -1.71
VPS27YNR006W AAC3P18238 307 aa4.39□□□□□ -1.71
VPS27YNR006W YCL002CP25565 263 aa4.39□□□□□ -1.71
VPS27YNR006W MSH1P25846 959 aa4.39□□□□□ -1.71
VPS27YNR006W YKR078WP36158 585 aaKnown RBP4.39□□□□□ -1.71
VPS27YNR006W TAT1P38085 619 aa4.39□□□□□ -1.71
VPS27YNR006W SAF1P38352 637 aa4.39□□□□□ -1.71
VPS27YNR006W YHL012WP38709 493 aa4.39□□□□□ -1.71
VPS27YNR006W SKN7P38889 622 aa4.39□□□□□ -1.71
VPS27YNR006W ALY2P47029 1046 aa4.39□□□□□ -1.71
VPS27YNR006W HOL1P53389 586 aa4.39□□□□□ -1.71
VPS27YNR006W LRS4Q04087 347 aaKnown RBP4.39□□□□□ -1.71
VPS27YNR006W SGD1Q06132 899 aa4.39□□□□□ -1.71
VPS27YNR006W PSR1Q07800 427 aa4.39□□□□□ -1.71
VPS27YNR006W NUR1Q12066 484 aa4.39□□□□□ -1.71
VPS27YNR006W DCS2Q12123 353 aa4.39□□□□□ -1.71
VPS27YNR006W YPR053CQ6Q5F3 151 aa4.39□□□□□ -1.71
VPS27YNR006W DHR2P36009 735 aaPredicted RBP4.38□□□□□ -1.71
VPS27YNR006W YKR051WP36142 418 aa4.38□□□□□ -1.71
VPS27YNR006W NOP4P37838 685 aaKnown RBP4.38□□□□□ -1.71
VPS27YNR006W PIK1P39104 1066 aa4.38□□□□□ -1.71
VPS27YNR006W NOP16P40007 231 aaKnown RBP4.38□□□□□ -1.71
VPS27YNR006W DPH1P40487 425 aaKnown RBP4.38□□□□□ -1.71
VPS27YNR006W CIT3P43635 486 aa4.38□□□□□ -1.71
VPS27YNR006W BNA2P47125 453 aa4.38□□□□□ -1.71
VPS27YNR006W PUS4P48567 403 aaKnown RBP4.38□□□□□ -1.71
VPS27YNR006W MTC3P53077 123 aa4.38□□□□□ -1.71
VPS27YNR006W PCL10P53124 433 aa4.38□□□□□ -1.71
VPS27YNR006W TFC6Q06339 672 aa4.38□□□□□ -1.71
VPS27YNR006W YLR352WQ06479 807 aa4.38□□□□□ -1.71
VPS27YNR006W MDM38Q08179 573 aa4.38□□□□□ -1.71
VPS27YNR006W MCA1Q08601 432 aa4.38□□□□□ -1.71
VPS27YNR006W ARP7Q12406 477 aa4.38□□□□□ -1.71
VPS27YNR006W MET8P15807 274 aa4.37□□□□□ -1.71
VPS27YNR006W DAL7P21826 554 aa4.37□□□□□ -1.71
VPS27YNR006W SRO9P25567 434 aaKnown RBP4.37□□□□□ -1.71
VPS27YNR006W SEC65P29478 273 aa4.37□□□□□ -1.71
VPS27YNR006W CYS3P31373 394 aaKnown RBP4.37□□□□□ -1.71
VPS27YNR006W PAH1P32567 862 aa4.37□□□□□ -1.71
VPS27YNR006W VMA8P32610 256 aaKnown RBP4.37□□□□□ -1.71
VPS27YNR006W AXL2P38928 823 aa4.37□□□□□ -1.71
VPS27YNR006W EAF5P39995 279 aa4.37□□□□□ -1.71
VPS27YNR006W YIL092WP40497 633 aa4.37□□□□□ -1.71
VPS27YNR006W OYE3P41816 400 aaPredicted RBP4.37□□□□□ -1.71
VPS27YNR006W MPP10P47083 593 aaKnown RBP4.37□□□□□ -1.71
VPS27YNR006W IRC3Q06683 689 aa4.37□□□□□ -1.71
VPS27YNR006W YOR059CQ08448 450 aaKnown RBP4.37□□□□□ -1.71
VPS27YNR006W YLL058WQ12198 575 aa4.37□□□□□ -1.71
VPS27YNR006W PHM7Q12252 991 aa4.37□□□□□ -1.71
VPS27YNR006W YBR182C-AQ8TGU6 64 aa4.37□□□□□ -1.71
VPS27YNR006W HSP82P02829 709 aaKnown RBP4.37□□□□□ -1.71
VPS27YNR006W SPS1P08458 490 aa4.37□□□□□ -1.71
VPS27YNR006W MRP7P12687 371 aa4.37□□□□□ -1.71
VPS27YNR006W NCP1P16603 691 aaKnown RBP4.37□□□□□ -1.71
VPS27YNR006W SPO16P17122 198 aa4.37□□□□□ -1.71
VPS27YNR006W CDC48P25694 835 aaKnown RBP4.37□□□□□ -1.71
VPS27YNR006W MDL2P33311 773 aa4.37□□□□□ -1.71
VPS27YNR006W YKL050CP35736 922 aa4.37□□□□□ -1.71
VPS27YNR006W CCZ1P38273 704 aa4.37□□□□□ -1.71
VPS27YNR006W GIC1P38785 314 aa4.37□□□□□ -1.71
VPS27YNR006W LAM1P38851 1228 aa4.37□□□□□ -1.71
VPS27YNR006W DUN1P39009 513 aa4.37□□□□□ -1.71
VPS27YNR006W PEX7P39108 375 aa4.37□□□□□ -1.71
VPS27YNR006W YER158CP40095 573 aa4.37□□□□□ -1.71
VPS27YNR006W RAD26P40352 1085 aa4.37□□□□□ -1.71
VPS27YNR006W RLP7P40693 322 aaKnown RBP4.37□□□□□ -1.71
VPS27YNR006W RPS0BP46654 252 aaKnown RBP4.37□□□□□ -1.71
VPS27YNR006W RNR4P49723 345 aaKnown RBP4.37□□□□□ -1.71
VPS27YNR006W RCM1P53972 490 aa4.37□□□□□ -1.71
VPS27YNR006W TDA9Q04545 1251 aa4.37□□□□□ -1.71
VPS27YNR006W SCM3Q12334 223 aa4.37□□□□□ -1.71
VPS27YNR006W Q0142Q9ZZW4 58 aa4.37□□□□□ -1.71
VPS27YNR006W SNF1P06782 633 aaKnown RBP4.36□□□□□ -1.71
VPS27YNR006W MTF2P10849 440 aa4.36□□□□□ -1.71
VPS27YNR006W PHO3P24031 467 aa4.36□□□□□ -1.71
VPS27YNR006W SEG2P34250 1132 aa4.36□□□□□ -1.71
VPS27YNR006W APM3P38153 483 aa4.36□□□□□ -1.71
VPS27YNR006W UBS1P38290 277 aa4.36□□□□□ -1.71
VPS27YNR006W ICP55P40051 511 aa4.36□□□□□ -1.71
VPS27YNR006W RIC1P40395 1056 aa4.36□□□□□ -1.71
VPS27YNR006W MAD3P47074 515 aa4.36□□□□□ -1.71
VPS27YNR006W RRT6P53117 311 aaPredicted RBP4.36□□□□□ -1.71
VPS27YNR006W TIM10P87108 93 aa4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms