RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C DYN3Q04949 312 aa7.67□□□□□ -1.18
AFG2YLR397C SIL1Q08199 421 aa7.67□□□□□ -1.18
AFG2YLR397C RIM20Q12033 661 aa7.67□□□□□ -1.18
AFG2YLR397C YPR022CQ12139 1133 aa7.67□□□□□ -1.18
AFG2YLR397C ATP16Q12165 160 aa7.67□□□□□ -1.18
AFG2YLR397C CMD1P06787 147 aaKnown RBP7.67□□□□□ -1.18
AFG2YLR397C AST1P35183 429 aa7.67□□□□□ -1.18
AFG2YLR397C ATP3P38077 311 aaKnown RBP7.67□□□□□ -1.18
AFG2YLR397C MCX1P38323 520 aaPredicted RBP7.67□□□□□ -1.18
AFG2YLR397C PPX1P38698 397 aa7.67□□□□□ -1.18
AFG2YLR397C ERP5P38819 212 aa7.67□□□□□ -1.18
AFG2YLR397C YER186CP40101 306 aa7.67□□□□□ -1.18
AFG2YLR397C ARX1Q03862 593 aaKnown RBP7.67□□□□□ -1.18
AFG2YLR397C YEH2Q07950 538 aa7.67□□□□□ -1.18
AFG2YLR397C YOR352WQ08816 343 aa7.67□□□□□ -1.18
AFG2YLR397C ELG1Q12050 791 aa7.67□□□□□ -1.18
AFG2YLR397C YAK1P14680 807 aa7.66□□□□□ -1.18
AFG2YLR397C NMT1P14743 455 aa7.66□□□□□ -1.18
AFG2YLR397C SPO12P17123 173 aa7.66□□□□□ -1.18
AFG2YLR397C DBP3P20447 523 aaKnown RBP7.66□□□□□ -1.18
AFG2YLR397C PEX1P24004 1043 aa7.66□□□□□ -1.18
AFG2YLR397C TPO5P36029 618 aa7.66□□□□□ -1.18
AFG2YLR397C APE4P38821 490 aa7.66□□□□□ -1.18
AFG2YLR397C DSE1P40077 573 aa7.66□□□□□ -1.18
AFG2YLR397C YER137CP40083 148 aaKnown RBP7.66□□□□□ -1.18
AFG2YLR397C YTA6P40328 754 aa7.66□□□□□ -1.18
AFG2YLR397C YGR016WP53209 190 aa7.66□□□□□ -1.18
AFG2YLR397C UTP8P53276 713 aaKnown RBP7.66□□□□□ -1.18
AFG2YLR397C LAM4P38800 1345 aa7.66□□□□□ -1.18
AFG2YLR397C DAP2P18962 818 aa7.66□□□□□ -1.18
AFG2YLR397C OPI1P21957 404 aa7.66□□□□□ -1.18
AFG2YLR397C HSP30P25619 332 aa7.66□□□□□ -1.18
AFG2YLR397C EUG1P32474 517 aa7.66□□□□□ -1.18
AFG2YLR397C KTR2P33550 425 aa7.66□□□□□ -1.18
AFG2YLR397C YKL050CP35736 922 aa7.66□□□□□ -1.18
AFG2YLR397C ZRG8P40021 1076 aa7.66□□□□□ -1.18
AFG2YLR397C TDA10P42938 290 aa7.66□□□□□ -1.18
AFG2YLR397C ORC3P54790 616 aa7.66□□□□□ -1.18
AFG2YLR397C UBP2Q01476 1272 aa7.66□□□□□ -1.18
AFG2YLR397C LGE1Q02796 332 aaKnown RBP7.66□□□□□ -1.18
AFG2YLR397C URH1Q04179 340 aa7.66□□□□□ -1.18
AFG2YLR397C RUP1Q12242 671 aa7.66□□□□□ -1.18
AFG2YLR397C UTP10P42945 1769 aaKnown RBP7.65□□□□□ -1.18
AFG2YLR397C POM152P39685 1337 aa7.65□□□□□ -1.18
AFG2YLR397C PPH3P32345 308 aa7.65□□□□□ -1.18
AFG2YLR397C MRPL17P36528 281 aa7.65□□□□□ -1.18
AFG2YLR397C QDR2P40474 542 aa7.65□□□□□ -1.18
AFG2YLR397C YIL077CP40508 320 aa7.65□□□□□ -1.18
AFG2YLR397C COG2P53271 262 aa7.65□□□□□ -1.18
AFG2YLR397C RPN4Q03465 531 aa7.65□□□□□ -1.18
AFG2YLR397C SVF1Q05515 481 aa7.65□□□□□ -1.18
AFG2YLR397C YPL150WQ12152 901 aa7.65□□□□□ -1.18
AFG2YLR397C LEU2P04173 364 aaPredicted RBP7.64□□□□□ -1.19
AFG2YLR397C SUP45P12385 437 aaKnown RBP7.64□□□□□ -1.19
AFG2YLR397C SFL1P20134 766 aa7.64□□□□□ -1.19
AFG2YLR397C URA1P28272 314 aaPredicted RBP7.64□□□□□ -1.19
AFG2YLR397C NAM7P30771 971 aaKnown RBP7.64□□□□□ -1.19
AFG2YLR397C VHR2P40041 505 aa7.64□□□□□ -1.19
AFG2YLR397C MAL11P53048 616 aa7.64□□□□□ -1.19
AFG2YLR397C YNL040WP53960 456 aaPredicted RBP7.64□□□□□ -1.19
AFG2YLR397C ERG5P54781 538 aa7.64□□□□□ -1.19
AFG2YLR397C NOG1Q02892 647 aaKnown RBP7.64□□□□□ -1.19
AFG2YLR397C YMR010WQ03687 405 aa7.64□□□□□ -1.19
AFG2YLR397C TAF11Q04226 346 aa7.64□□□□□ -1.19
AFG2YLR397C TOS4Q06266 489 aa7.64□□□□□ -1.19
AFG2YLR397C ADY3Q07732 790 aa7.64□□□□□ -1.19
AFG2YLR397C YLL007CQ07799 665 aa7.64□□□□□ -1.19
AFG2YLR397C CLN2P20438 545 aa7.64□□□□□ -1.19
AFG2YLR397C YKR078WP36158 585 aaKnown RBP7.64□□□□□ -1.19
AFG2YLR397C MAK5P38112 773 aaPredicted RBP7.64□□□□□ -1.19
AFG2YLR397C YHL050CP38721 697 aa7.64□□□□□ -1.19
AFG2YLR397C SHQ1P40486 507 aaPredicted RBP7.64□□□□□ -1.19
AFG2YLR397C ULP2P40537 1034 aaPredicted RBP7.64□□□□□ -1.19
AFG2YLR397C GPI8P49018 411 aa7.64□□□□□ -1.19
AFG2YLR397C ELP3Q02908 557 aaKnown RBP7.64□□□□□ -1.19
AFG2YLR397C GPI17Q04080 534 aa7.64□□□□□ -1.19
AFG2YLR397C BRX1Q08235 291 aaKnown RBP7.64□□□□□ -1.19
AFG2YLR397C TRM11Q12463 433 aa7.64□□□□□ -1.19
AFG2YLR397C RRP36Q12481 300 aaPredicted RBP7.64□□□□□ -1.19
AFG2YLR397C ARP6Q12509 438 aa7.64□□□□□ -1.19
AFG2YLR397C YEL077CQ3E7X8 1277 aa7.64□□□□□ -1.19
AFG2YLR397C YBR298C-AQ8TGK4 73 aa7.64□□□□□ -1.19
AFG2YLR397C SPO14P36126 1683 aa7.63□□□□□ -1.19
AFG2YLR397C ISY1P21374 235 aaPredicted RBP7.63□□□□□ -1.19
AFG2YLR397C KRE2P27809 442 aa7.63□□□□□ -1.19
AFG2YLR397C SMY1P32364 656 aaKnown RBP7.63□□□□□ -1.19
AFG2YLR397C YME1P32795 747 aa7.63□□□□□ -1.19
AFG2YLR397C YET1P35723 206 aa7.63□□□□□ -1.19
AFG2YLR397C YNL320WP42840 284 aa7.63□□□□□ -1.19
AFG2YLR397C SRT1Q03175 343 aa7.63□□□□□ -1.19
AFG2YLR397C SOV1Q04748 898 aa7.63□□□□□ -1.19
AFG2YLR397C NTO1Q12311 748 aa7.63□□□□□ -1.19
AFG2YLR397C NUP192P47054 1683 aa7.63□□□□□ -1.19
AFG2YLR397C MSD1P15179 658 aaKnown RBP7.63□□□□□ -1.19
AFG2YLR397C STI1P15705 589 aaKnown RBP RIP-Chip data7.63□□□□□ -1.19not detected
AFG2YLR397C MDJ1P35191 511 aa7.63□□□□□ -1.19
AFG2YLR397C SPC42P36094 363 aa7.63□□□□□ -1.19
AFG2YLR397C YKR015CP36111 568 aa7.63□□□□□ -1.19
AFG2YLR397C SMC2P38989 1170 aaKnown RBP7.63□□□□□ -1.19
AFG2YLR397C BOI2P39969 1040 aa7.63□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms