RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIC1	YLR039C	MIP6	P38760	659 aa	Known RBP	2.57	□□□□□ -2
RIC1	YLR039C	LAM1	P38851	1228 aa		2.57	□□□□□ -2
RIC1	YLR039C	VHR1	P40522	640 aa		2.57	□□□□□ -2
RIC1	YLR039C	YJR039W	P47107	1121 aa		2.57	□□□□□ -2
RIC1	YLR039C	PSP2	P50109	593 aa	Known RBP	2.57	□□□□□ -2
RIC1	YLR039C	MRPS35	P53292	345 aa		2.57	□□□□□ -2
RIC1	YLR039C	PHM6	Q05637	104 aa		2.57	□□□□□ -2
RIC1	YLR039C	SGD1	Q06132	899 aa		2.57	□□□□□ -2
RIC1	YLR039C	YPR027C	Q12079	277 aa		2.57	□□□□□ -2
RIC1	YLR039C	NYV1	Q12255	253 aa		2.57	□□□□□ -2
RIC1	YLR039C	CDC26	P14724	124 aa		2.56	□□□□□ -2
RIC1	YLR039C	APA1	P16550	321 aa	Known RBP	2.56	□□□□□ -2
RIC1	YLR039C	POL12	P38121	705 aa	Predicted RBP	2.56	□□□□□ -2
RIC1	YLR039C	YHR202W	P38887	602 aa		2.56	□□□□□ -2
RIC1	YLR039C	MEF2	P39677	819 aa		2.56	□□□□□ -2
RIC1	YLR039C	NCS6	P53088	359 aa		2.56	□□□□□ -2
RIC1	YLR039C	YAP6	Q03935	383 aa		2.56	□□□□□ -2
RIC1	YLR039C	YLR407W	Q06070	228 aa		2.56	□□□□□ -2
RIC1	YLR039C	SWI6	P09959	803 aa		2.56	□□□□□ -2
RIC1	YLR039C	AKL1	P38080	1108 aa	Known RBP	2.56	□□□□□ -2
RIC1	YLR039C	BEM4	P39011	633 aa		2.56	□□□□□ -2
RIC1	YLR039C	LSB3	P43603	459 aa	Known RBP	2.56	□□□□□ -2
RIC1	YLR039C	RSC8	P43609	557 aa	Known RBP	2.56	□□□□□ -2
RIC1	YLR039C	MTR3	P48240	250 aa	Predicted RBP	2.56	□□□□□ -2
RIC1	YLR039C	SKY1	Q03656	742 aa		2.56	□□□□□ -2
RIC1	YLR039C	YPS7	Q06325	596 aa		2.56	□□□□□ -2
RIC1	YLR039C	ATP4	P05626	244 aa		2.55	□□□□□ -2
RIC1	YLR039C	LIP5	P32875	414 aa		2.55	□□□□□ -2
RIC1	YLR039C	SWE1	P32944	819 aa		2.55	□□□□□ -2
RIC1	YLR039C	YNL195C	P40168	261 aa		2.55	□□□□□ -2
RIC1	YLR039C	PIP2	P52960	996 aa		2.55	□□□□□ -2
RIC1	YLR039C	SPC105	P53148	917 aa		2.55	□□□□□ -2
RIC1	YLR039C	VPS62	P53285	467 aa		2.55	□□□□□ -2
RIC1	YLR039C	MRPL22	P53881	309 aa		2.55	□□□□□ -2
RIC1	YLR039C	ASI2	P53895	289 aa		2.55	□□□□□ -2
RIC1	YLR039C	RCR2	Q03446	210 aa	Known RBP	2.55	□□□□□ -2
RIC1	YLR039C	APM4	Q99186	491 aa		2.55	□□□□□ -2
RIC1	YLR039C	HIS5	P07172	385 aa		2.55	□□□□□ -2
RIC1	YLR039C	KAR1	P11927	433 aa		2.55	□□□□□ -2
RIC1	YLR039C	SED4	P25365	1065 aa		2.55	□□□□□ -2
RIC1	YLR039C	IMG2	P25642	146 aa	Predicted RBP	2.55	□□□□□ -2
RIC1	YLR039C	NIC96	P34077	839 aa		2.55	□□□□□ -2
RIC1	YLR039C	RRP8	P38961	392 aa	Known RBP	2.55	□□□□□ -2
RIC1	YLR039C	EAF5	P39995	279 aa		2.55	□□□□□ -2
RIC1	YLR039C	CHA4	P43634	648 aa		2.55	□□□□□ -2
RIC1	YLR039C	INP52	P50942	1183 aa		2.55	□□□□□ -2
RIC1	YLR039C	NOP15	P53927	220 aa	Predicted RBP	2.55	□□□□□ -2
RIC1	YLR039C	PTA1	Q01329	785 aa	Predicted RBP	2.55	□□□□□ -2
RIC1	YLR039C	GPB1	Q08886	897 aa		2.55	□□□□□ -2
RIC1	YLR039C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	2.55	□□□□□ -2	not detected
RIC1	YLR039C	DFG16	Q99234	619 aa		2.55	□□□□□ -2
RIC1	YLR039C	ADE2	P21264	571 aa	Known RBP	2.55	□□□□□ -2
RIC1	YLR039C	YKU70	P32807	602 aa		2.55	□□□□□ -2
RIC1	YLR039C	KTR4	P38131	464 aa		2.55	□□□□□ -2
RIC1	YLR039C	VID28	P40547	921 aa		2.55	□□□□□ -2
RIC1	YLR039C	NOP2	P40991	618 aa	Known RBP	2.55	□□□□□ -2
RIC1	YLR039C	PBP1	P53297	722 aa	Known RBP	2.55	□□□□□ -2
RIC1	YLR039C	YDR132C	Q03900	495 aa		2.55	□□□□□ -2
RIC1	YLR039C	RGC1	Q06108	1083 aa	Known RBP	2.55	□□□□□ -2
RIC1	YLR039C	NPC2	Q12408	173 aa		2.55	□□□□□ -2
RIC1	YLR039C	KCS1	Q12494	1050 aa		2.55	□□□□□ -2
RIC1	YLR039C	MON2	P48563	1636 aa	Predicted RBP	2.54	□□□□□ -2
RIC1	YLR039C	HCA4	P20448	770 aa	Known RBP	2.54	□□□□□ -2
RIC1	YLR039C	KCC4	P25389	1037 aa		2.54	□□□□□ -2
RIC1	YLR039C	HXT4	P32467	576 aa		2.54	□□□□□ -2
RIC1	YLR039C	PZF1	P39933	429 aa		2.54	□□□□□ -2
RIC1	YLR039C	IES5	P40060	125 aa		2.54	□□□□□ -2
RIC1	YLR039C	SNO2	P53823	222 aa		2.54	□□□□□ -2
RIC1	YLR039C	GCN5	Q03330	439 aa		2.54	□□□□□ -2
RIC1	YLR039C	OMS1	Q06668	471 aa		2.54	□□□□□ -2
RIC1	YLR039C	BUD21	Q08492	214 aa	Predicted RBP	2.54	□□□□□ -2
RIC1	YLR039C	ERG6	P25087	383 aa	Known RBP	2.54	□□□□□ -2
RIC1	YLR039C	ATG19	P35193	415 aa		2.54	□□□□□ -2
RIC1	YLR039C	OMA1	P36163	345 aa		2.54	□□□□□ -2
RIC1	YLR039C	SET2	P46995	733 aa	Known RBP	2.54	□□□□□ -2
RIC1	YLR039C	SLD3	P53135	668 aa		2.54	□□□□□ -2
RIC1	YLR039C	MOT3	P54785	490 aa	Known RBP	2.54	□□□□□ -2
RIC1	YLR039C	CEG1	Q01159	459 aa	Predicted RBP	2.54	□□□□□ -2
RIC1	YLR039C	YPL277C	Q08989	487 aa		2.54	□□□□□ -2
RIC1	YLR039C	TRX2	P22803	104 aa	Known RBP	2.53	□□□□□ -2
RIC1	YLR039C	CDC20	P26309	610 aa		2.53	□□□□□ -2
RIC1	YLR039C	SEG2	P34250	1132 aa		2.53	□□□□□ -2
RIC1	YLR039C	VPS24	P36095	224 aa	Known RBP	2.53	□□□□□ -2
RIC1	YLR039C	PLB1	P39105	664 aa		2.53	□□□□□ -2
RIC1	YLR039C	ISA1	Q07821	250 aa	Predicted RBP	2.53	□□□□□ -2
RIC1	YLR039C	LAS17	Q12446	633 aa		2.53	□□□□□ -2
RIC1	YLR039C	IME1	P21190	360 aa		2.53	□□□□□ -2
RIC1	YLR039C	TSA1	P34760	196 aa	Known RBP	2.53	□□□□□ -2
RIC1	YLR039C	YHR112C	P38716	378 aa		2.53	□□□□□ -2
RIC1	YLR039C	IES1	P43579	692 aa		2.53	□□□□□ -2
RIC1	YLR039C	PRP31	P49704	494 aa	Predicted RBP	2.53	□□□□□ -2
RIC1	YLR039C	STP4	Q07351	490 aa		2.53	□□□□□ -2
RIC1	YLR039C	NGL1	Q08213	363 aa	Known RBP	2.53	□□□□□ -2
RIC1	YLR039C	PEX15	Q08215	383 aa		2.53	□□□□□ -2
RIC1	YLR039C	CWC2	Q12046	339 aa	Predicted RBP	2.53	□□□□□ -2
RIC1	YLR039C	MSS18	P08593	268 aa		2.53	□□□□□ -2.01
RIC1	YLR039C	PGI1	P12709	554 aa	Known RBP	2.53	□□□□□ -2.01
RIC1	YLR039C	YHL041W	P38730	149 aa		2.53	□□□□□ -2.01
RIC1	YLR039C	GID8	P40208	455 aa		2.53	□□□□□ -2.01
RIC1	YLR039C	HIS6	P40545	261 aa		2.53	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms