RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	PER1	P25625	357 aa		7.37	□□□□□ -1.23
TIF1	YKR059W	NIC96	P34077	839 aa		7.37	□□□□□ -1.23
TIF1	YKR059W	STO1	P34160	861 aa	Known RBP	7.37	□□□□□ -1.23
TIF1	YKR059W	ACA1	P39970	489 aa		7.37	□□□□□ -1.23
TIF1	YKR059W	SLS1	P42900	643 aa		7.37	□□□□□ -1.23
TIF1	YKR059W	IES1	P43579	692 aa		7.37	□□□□□ -1.23
TIF1	YKR059W	DUG1	P43616	481 aa	Known RBP	7.37	□□□□□ -1.23
TIF1	YKR059W	NUP85	P46673	744 aa		7.37	□□□□□ -1.23
TIF1	YKR059W	VPS53	P47061	822 aa		7.37	□□□□□ -1.23
TIF1	YKR059W	YJR098C	P47139	656 aa		7.37	□□□□□ -1.23
TIF1	YKR059W	SPC105	P53148	917 aa		7.37	□□□□□ -1.23
TIF1	YKR059W	GUP1	P53154	560 aa		7.37	□□□□□ -1.23
TIF1	YKR059W	MET14	Q02196	202 aa		7.37	□□□□□ -1.23
TIF1	YKR059W	PSR2	Q07949	397 aa		7.37	□□□□□ -1.23
TIF1	YKR059W	SOG2	Q08817	791 aa		7.37	□□□□□ -1.23
TIF1	YKR059W	TUS1	Q06412	1307 aa		7.36	□□□□□ -1.23
TIF1	YKR059W	DAL5	P15365	543 aa		7.36	□□□□□ -1.23
TIF1	YKR059W	SEC18	P18759	758 aa	Known RBP	7.36	□□□□□ -1.23
TIF1	YKR059W	SFL1	P20134	766 aa		7.36	□□□□□ -1.23
TIF1	YKR059W	SSH4	P32343	579 aa		7.36	□□□□□ -1.23
TIF1	YKR059W	PTK1	P36002	662 aa	Predicted RBP	7.36	□□□□□ -1.23
TIF1	YKR059W	CKB2	P38930	258 aa		7.36	□□□□□ -1.23
TIF1	YKR059W	SIP5	P40210	489 aa	Known RBP	7.36	□□□□□ -1.23
TIF1	YKR059W	MET13	P53128	600 aa		7.36	□□□□□ -1.23
TIF1	YKR059W	YNL034W	P53963	612 aa		7.36	□□□□□ -1.23
TIF1	YKR059W	YNL018C	P53976	612 aa		7.36	□□□□□ -1.23
TIF1	YKR059W	YDR444W	Q04093	687 aa		7.36	□□□□□ -1.23
TIF1	YKR059W	RRP6	Q12149	733 aa	Known RBP	7.36	□□□□□ -1.23
TIF1	YKR059W	YLL054C	Q12244	843 aa		7.36	□□□□□ -1.23
TIF1	YKR059W	NFS1	P25374	497 aa		7.35	□□□□□ -1.23
TIF1	YKR059W	SPC29	P33419	253 aa		7.35	□□□□□ -1.23
TIF1	YKR059W	IES5	P40060	125 aa		7.35	□□□□□ -1.23
TIF1	YKR059W	NIT3	P49954	291 aa		7.35	□□□□□ -1.23
TIF1	YKR059W	DAM1	P53267	343 aa		7.35	□□□□□ -1.23
TIF1	YKR059W	PBP1	P53297	722 aa	Known RBP	7.35	□□□□□ -1.23
TIF1	YKR059W	TGL2	P54857	326 aa		7.35	□□□□□ -1.23
TIF1	YKR059W	YPL034W	Q03083	165 aa		7.35	□□□□□ -1.23
TIF1	YKR059W	PCL2	P25693	308 aa		7.34	□□□□□ -1.23
TIF1	YKR059W	MPE1	P35728	441 aa	Known RBP	7.34	□□□□□ -1.23
TIF1	YKR059W	YBL028C	P38202	106 aa		7.34	□□□□□ -1.23
TIF1	YKR059W	VID27	P40157	782 aa		7.34	□□□□□ -1.23
TIF1	YKR059W	CCM1	P48237	864 aa	Predicted RBP	7.34	□□□□□ -1.23
TIF1	YKR059W	UBP2	Q01476	1272 aa		7.34	□□□□□ -1.23
TIF1	YKR059W	AVO1	Q08236	1176 aa		7.34	□□□□□ -1.23
TIF1	YKR059W	YPL260W	Q08977	551 aa		7.34	□□□□□ -1.23
TIF1	YKR059W	RMP1	Q12530	201 aa		7.34	□□□□□ -1.23
TIF1	YKR059W	TUB2	P02557	457 aa	Known RBP	7.33	□□□□□ -1.24
TIF1	YKR059W	GAL1	P04385	528 aa		7.33	□□□□□ -1.24
TIF1	YKR059W	REC104	P33323	182 aa		7.33	□□□□□ -1.24
TIF1	YKR059W	HSP78	P33416	811 aa		7.33	□□□□□ -1.24
TIF1	YKR059W	TFA2	P36145	328 aa		7.33	□□□□□ -1.24
TIF1	YKR059W	YAR028W	P39548	234 aa		7.33	□□□□□ -1.24
TIF1	YKR059W	GPB2	P39717	880 aa		7.33	□□□□□ -1.24
TIF1	YKR059W	DOT6	P40059	670 aa	Known RBP	7.33	□□□□□ -1.24
TIF1	YKR059W	GZF3	P42944	551 aa	Known RBP	7.33	□□□□□ -1.24
TIF1	YKR059W	YJR096W	P47137	282 aa		7.33	□□□□□ -1.24
TIF1	YKR059W	GCV1	P48015	400 aa		7.33	□□□□□ -1.24
TIF1	YKR059W	GIR2	Q03768	265 aa	Predicted RBP	7.33	□□□□□ -1.24
TIF1	YKR059W	INM2	Q05533	292 aa		7.33	□□□□□ -1.24
TIF1	YKR059W	MLC2	Q06580	163 aa		7.33	□□□□□ -1.24
TIF1	YKR059W	MDM20	Q12387	796 aa	Known RBP	7.33	□□□□□ -1.24
TIF1	YKR059W	MDL2	P33311	773 aa		7.32	□□□□□ -1.24
TIF1	YKR059W	REI1	P38344	393 aa	Predicted RBP	7.32	□□□□□ -1.24
TIF1	YKR059W	EMP65	P40085	556 aa		7.32	□□□□□ -1.24
TIF1	YKR059W	YIR042C	P40586	236 aa		7.32	□□□□□ -1.24
TIF1	YKR059W	CAF16	P43569	289 aa		7.32	□□□□□ -1.24
TIF1	YKR059W	TAF1	P46677	1066 aa		7.32	□□□□□ -1.24
TIF1	YKR059W	NSG2	P53898	299 aa		7.32	□□□□□ -1.24
TIF1	YKR059W	HAS1	Q03532	505 aa	Known RBP	7.32	□□□□□ -1.24
TIF1	YKR059W	CSI1	Q04368	295 aa		7.32	□□□□□ -1.24
TIF1	YKR059W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	7.31	□□□□□ -1.24	not detected
TIF1	YKR059W	CST26	P38226	397 aa		7.31	□□□□□ -1.24
TIF1	YKR059W	MSC7	P38694	644 aa		7.31	□□□□□ -1.24
TIF1	YKR059W	TIF4631	P39935	952 aa	Known RBP	7.31	□□□□□ -1.24
TIF1	YKR059W	YDR514C	Q04408	483 aa		7.31	□□□□□ -1.24
TIF1	YKR059W	MET7	Q08645	548 aa		7.31	□□□□□ -1.24
TIF1	YKR059W	SUT2	Q12286	268 aa		7.31	□□□□□ -1.24
TIF1	YKR059W	SUI2	P20459	304 aa	Known RBP	7.3	□□□□□ -1.24
TIF1	YKR059W	GFD2	P25370	566 aa	Known RBP	7.3	□□□□□ -1.24
TIF1	YKR059W	UIP5	P36137	443 aa		7.3	□□□□□ -1.24
TIF1	YKR059W	JNM1	P36224	373 aa		7.3	□□□□□ -1.24
TIF1	YKR059W	RPN10	P38886	268 aa	Known RBP	7.3	□□□□□ -1.24
TIF1	YKR059W	OAF1	P39720	1047 aa	Predicted RBP	7.3	□□□□□ -1.24
TIF1	YKR059W	SNP1	Q00916	300 aa	Predicted RBP	7.3	□□□□□ -1.24
TIF1	YKR059W	SVL3	Q03088	825 aa	Known RBP	7.3	□□□□□ -1.24
TIF1	YKR059W	PHM6	Q05637	104 aa		7.3	□□□□□ -1.24
TIF1	YKR059W	RSC3	Q06639	885 aa		7.3	□□□□□ -1.24
TIF1	YKR059W	RRI2	Q12348	645 aa		7.3	□□□□□ -1.24
TIF1	YKR059W	YER152C	P10356	443 aa		7.29	□□□□□ -1.24
TIF1	YKR059W	GCD7	P32502	381 aa	Predicted RBP	7.29	□□□□□ -1.24
TIF1	YKR059W	RGT1	P32862	1170 aa		7.29	□□□□□ -1.24
TIF1	YKR059W	MNN4	P36044	1178 aa		7.29	□□□□□ -1.24
TIF1	YKR059W	DID4	P36108	232 aa		7.29	□□□□□ -1.24
TIF1	YKR059W	YBR238C	P38330	731 aa	Known RBP	7.29	□□□□□ -1.24
TIF1	YKR059W	FUN12	P39730	1002 aa	Known RBP	7.29	□□□□□ -1.24
TIF1	YKR059W	RPT2	P40327	437 aa	Known RBP	7.29	□□□□□ -1.24
TIF1	YKR059W	SPO74	P45819	413 aa		7.29	□□□□□ -1.24
TIF1	YKR059W	MNN11	P46985	422 aa	Known RBP	7.29	□□□□□ -1.24
TIF1	YKR059W	YLR346C	Q06139	101 aa		7.29	□□□□□ -1.24
TIF1	YKR059W	SPO21	Q12411	609 aa		7.29	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms