RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C MSR1P38714 643 aa5.78□□□□□ -1.48
VPS1YKR001C TIF4631P39935 952 aaKnown RBP5.78□□□□□ -1.48
VPS1YKR001C MPS2P53159 387 aa5.78□□□□□ -1.48
VPS1YKR001C ASI1P54074 624 aa5.78□□□□□ -1.48
VPS1YKR001C SPN1Q06505 410 aaPredicted RBP5.78□□□□□ -1.48
VPS1YKR001C LOT6Q07923 191 aa5.78□□□□□ -1.48
VPS1YKR001C ESC8Q08119 714 aa5.78□□□□□ -1.48
VPS1YKR001C MED4Q12343 284 aa5.78□□□□□ -1.48
VPS1YKR001C OSH2Q12451 1283 aa5.78□□□□□ -1.48
VPS1YKR001C YGR161W-CQ3E744 92 aa5.78□□□□□ -1.48
VPS1YKR001C YDR034W-BQ6Q5X2 51 aa5.78□□□□□ -1.48
VPS1YKR001C ERG12P07277 443 aa5.77□□□□□ -1.49
VPS1YKR001C RPC40P07703 335 aaKnown RBP5.77□□□□□ -1.49
VPS1YKR001C ADH4P10127 382 aa5.77□□□□□ -1.49
VPS1YKR001C PWP1P21304 576 aaKnown RBP5.77□□□□□ -1.49
VPS1YKR001C AFR1P33304 620 aa5.77□□□□□ -1.49
VPS1YKR001C GDT1P38301 280 aaPredicted RBP5.77□□□□□ -1.49
VPS1YKR001C KSP1P38691 1029 aaKnown RBP5.77□□□□□ -1.49
VPS1YKR001C YEN1P40028 759 aa5.77□□□□□ -1.49
VPS1YKR001C IES5P40060 125 aa5.77□□□□□ -1.49
VPS1YKR001C NDE1P40215 560 aa5.77□□□□□ -1.49
VPS1YKR001C SAP185P40856 1058 aa5.77□□□□□ -1.49
VPS1YKR001C SBE2P42223 864 aaKnown RBP5.77□□□□□ -1.49
VPS1YKR001C FYV8P46949 817 aaKnown RBP5.77□□□□□ -1.49
VPS1YKR001C YJL055WP47044 245 aa5.77□□□□□ -1.49
VPS1YKR001C FOL2P51601 243 aaKnown RBP5.77□□□□□ -1.49
VPS1YKR001C ALT1P52893 592 aa5.77□□□□□ -1.49
VPS1YKR001C YNL193WP53870 558 aa5.77□□□□□ -1.49
VPS1YKR001C IPI3P53877 555 aa5.77□□□□□ -1.49
VPS1YKR001C GIM3P53900 129 aa5.77□□□□□ -1.49
VPS1YKR001C YDR090CQ03193 310 aa5.77□□□□□ -1.49
VPS1YKR001C SPO20Q04359 397 aa5.77□□□□□ -1.49
VPS1YKR001C REC8Q12188 680 aa5.77□□□□□ -1.49
VPS1YKR001C AI2P03876 854 aa5.77□□□□□ -1.49
VPS1YKR001C VMA2P16140 517 aaKnown RBP5.77□□□□□ -1.49
VPS1YKR001C SEC2P17065 759 aa5.77□□□□□ -1.49
VPS1YKR001C YAP1P19880 650 aaKnown RBP5.77□□□□□ -1.49
VPS1YKR001C SRO9P25567 434 aaKnown RBP5.77□□□□□ -1.49
VPS1YKR001C BCS1P32839 456 aa5.77□□□□□ -1.49
VPS1YKR001C RGT1P32862 1170 aa5.77□□□□□ -1.49
VPS1YKR001C MBP1P39678 833 aa5.77□□□□□ -1.49
VPS1YKR001C SEC28P40509 296 aaKnown RBP5.77□□□□□ -1.49
VPS1YKR001C RLP7P40693 322 aaKnown RBP5.77□□□□□ -1.49
VPS1YKR001C YFL066CP43538 392 aa5.77□□□□□ -1.49
VPS1YKR001C CSI1Q04368 295 aa5.77□□□□□ -1.49
VPS1YKR001C OPY2Q06810 360 aa5.77□□□□□ -1.49
VPS1YKR001C HIP1P06775 603 aa5.76□□□□□ -1.49
VPS1YKR001C SUI3P09064 285 aaKnown RBP5.76□□□□□ -1.49
VPS1YKR001C MSH1P25846 959 aa5.76□□□□□ -1.49
VPS1YKR001C YKL091CP33324 310 aaKnown RBP5.76□□□□□ -1.49
VPS1YKR001C SRL3P36167 246 aa5.76□□□□□ -1.49
VPS1YKR001C YBR242WP38331 238 aa5.76□□□□□ -1.49
VPS1YKR001C KIC1P38692 1080 aa5.76□□□□□ -1.49
VPS1YKR001C GPB2P39717 880 aa5.76□□□□□ -1.49
VPS1YKR001C ROK1P45818 564 aaPredicted RBP5.76□□□□□ -1.49
VPS1YKR001C NIS1P53939 407 aa5.76□□□□□ -1.49
VPS1YKR001C HOT1Q03213 719 aa5.76□□□□□ -1.49
VPS1YKR001C YML037CQ03703 340 aa5.76□□□□□ -1.49
VPS1YKR001C DCS1Q06151 350 aa5.76□□□□□ -1.49
VPS1YKR001C KEL3Q08979 651 aaPredicted RBP5.76□□□□□ -1.49
VPS1YKR001C ARG81P05085 880 aa5.75□□□□□ -1.49
VPS1YKR001C RPS19AP07280 144 aaKnown RBP5.75□□□□□ -1.49
VPS1YKR001C RPS19BP07281 144 aaPredicted RBP5.75□□□□□ -1.49
VPS1YKR001C KRS1P15180 591 aaKnown RBP5.75□□□□□ -1.49
VPS1YKR001C VPS3P23643 1011 aa5.75□□□□□ -1.49
VPS1YKR001C RPN2P32565 945 aaKnown RBP5.75□□□□□ -1.49
VPS1YKR001C HSP78P33416 811 aa5.75□□□□□ -1.49
VPS1YKR001C YKL063CP35725 167 aa5.75□□□□□ -1.49
VPS1YKR001C YKL050CP35736 922 aa5.75□□□□□ -1.49
VPS1YKR001C VPS51P36116 164 aa5.75□□□□□ -1.49
VPS1YKR001C ALG14P38242 237 aa5.75□□□□□ -1.49
VPS1YKR001C SIP3P38717 1229 aa5.75□□□□□ -1.49
VPS1YKR001C MPT5P39016 859 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
VPS1YKR001C SYG1P40528 902 aa5.75□□□□□ -1.49
VPS1YKR001C STU2P46675 888 aa5.75□□□□□ -1.49
VPS1YKR001C SGM1P47166 707 aa5.75□□□□□ -1.49
VPS1YKR001C SAP4P53036 818 aa5.75□□□□□ -1.49
VPS1YKR001C FOL1P53848 824 aa5.75□□□□□ -1.49
VPS1YKR001C RRN5Q02983 363 aa5.75□□□□□ -1.49
VPS1YKR001C MCP2Q06567 569 aa5.75□□□□□ -1.49
VPS1YKR001C LAP2Q10740 671 aa5.75□□□□□ -1.49
VPS1YKR001C REC107P21651 314 aa5.75□□□□□ -1.49
VPS1YKR001C TFB1P32776 642 aa5.75□□□□□ -1.49
VPS1YKR001C RPC34P32910 317 aa5.75□□□□□ -1.49
VPS1YKR001C NOP4P37838 685 aaKnown RBP5.75□□□□□ -1.49
VPS1YKR001C IFA38P38286 347 aa5.75□□□□□ -1.49
VPS1YKR001C GEM1P39722 662 aa5.75□□□□□ -1.49
VPS1YKR001C AIM10P39965 576 aaKnown RBP5.75□□□□□ -1.49
VPS1YKR001C ZRG8P40021 1076 aa5.75□□□□□ -1.49
VPS1YKR001C YJR061WP40355 935 aa5.75□□□□□ -1.49
VPS1YKR001C MDV1P47025 714 aa5.75□□□□□ -1.49
VPS1YKR001C MNP1P53163 194 aaPredicted RBP5.75□□□□□ -1.49
VPS1YKR001C PEX8P53248 589 aa5.75□□□□□ -1.49
VPS1YKR001C YGR266WP53326 701 aa5.75□□□□□ -1.49
VPS1YKR001C ESBP6P53918 673 aa5.75□□□□□ -1.49
VPS1YKR001C NCS2P53923 493 aaPredicted RBP5.75□□□□□ -1.49
VPS1YKR001C COG6P53959 839 aa5.75□□□□□ -1.49
VPS1YKR001C RPL34AP87262 121 aaPredicted RBP5.75□□□□□ -1.49
VPS1YKR001C BET4Q00618 327 aa5.75□□□□□ -1.49
VPS1YKR001C DML1Q03652 475 aa5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms