RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD2YKL027W ATG3P40344 310 aa12.48□□□□□ -0.41
TCD2YKL027W SHQ1P40486 507 aaPredicted RBP12.48□□□□□ -0.41
TCD2YKL027W ALT1P52893 592 aa12.48□□□□□ -0.41
TCD2YKL027W RCR2Q03446 210 aaKnown RBP12.48□□□□□ -0.41
TCD2YKL027W SNU56Q03782 492 aaKnown RBP12.48□□□□□ -0.41
TCD2YKL027W VPS38Q05919 439 aa12.48□□□□□ -0.41
TCD2YKL027W ESC8Q08119 714 aa12.48□□□□□ -0.41
TCD2YKL027W AI5_BETAQ9ZZX0 354 aa12.48□□□□□ -0.41
TCD2YKL027W DAL2P25335 343 aa12.47□□□□□ -0.41
TCD2YKL027W JNM1P36224 373 aa12.47□□□□□ -0.41
TCD2YKL027W MCM6P53091 1017 aaKnown RBP12.47□□□□□ -0.41
TCD2YKL027W DRN1P53255 507 aaKnown RBP12.47□□□□□ -0.41
TCD2YKL027W ALF1P53904 254 aa12.47□□□□□ -0.41
TCD2YKL027W TIF35Q04067 274 aaKnown RBP12.47□□□□□ -0.41
TCD2YKL027W CDD1Q06549 142 aa12.47□□□□□ -0.41
TCD2YKL027W ECM3Q99252 613 aa12.47□□□□□ -0.41
TCD2YKL027W VPS3P23643 1011 aa12.46□□□□□ -0.41
TCD2YKL027W MMM1P41800 426 aa12.46□□□□□ -0.41
TCD2YKL027W STB4P50104 949 aa12.46□□□□□ -0.41
TCD2YKL027W YPR027CQ12079 277 aa12.46□□□□□ -0.41
TCD2YKL027W PKH2Q12236 1081 aaKnown RBP12.46□□□□□ -0.41
TCD2YKL027W TRP2P00899 507 aaKnown RBP12.45□□□□□ -0.42
TCD2YKL027W MTF2P10849 440 aa12.45□□□□□ -0.42
TCD2YKL027W RNR1P21524 888 aaKnown RBP12.45□□□□□ -0.42
TCD2YKL027W SEC21P32074 935 aaKnown RBP12.45□□□□□ -0.42
TCD2YKL027W KDX1P36005 433 aa12.45□□□□□ -0.42
TCD2YKL027W TRZ1P36159 838 aaPredicted RBP12.45□□□□□ -0.42
TCD2YKL027W TBS1P38114 1094 aa12.45□□□□□ -0.42
TCD2YKL027W DYS1P38791 387 aa12.45□□□□□ -0.42
TCD2YKL027W XDJ1P39102 459 aa12.45□□□□□ -0.42
TCD2YKL027W STP1Q00947 519 aa12.45□□□□□ -0.42
TCD2YKL027W REC8Q12188 680 aa12.45□□□□□ -0.42
TCD2YKL027W RPS3P05750 240 aaKnown RBP12.44□□□□□ -0.42
TCD2YKL027W HAP2P06774 265 aa12.44□□□□□ -0.42
TCD2YKL027W CHS1P08004 1131 aa12.44□□□□□ -0.42
TCD2YKL027W RRP43P25359 394 aaPredicted RBP12.44□□□□□ -0.42
TCD2YKL027W ADK2P26364 225 aa12.44□□□□□ -0.42
TCD2YKL027W SPT5P27692 1063 aaKnown RBP12.44□□□□□ -0.42
TCD2YKL027W EFB1P32471 206 aaKnown RBP12.44□□□□□ -0.42
TCD2YKL027W MNR2P35724 969 aa12.44□□□□□ -0.42
TCD2YKL027W CCL1P37366 393 aa12.44□□□□□ -0.42
TCD2YKL027W AHC1Q12433 566 aa12.44□□□□□ -0.42
TCD2YKL027W YEL023CP39992 682 aa12.43□□□□□ -0.42
TCD2YKL027W POL31P46957 487 aa12.43□□□□□ -0.42
TCD2YKL027W YJR054WP47114 497 aa12.43□□□□□ -0.42
TCD2YKL027W GAL80P04387 435 aa12.42□□□□□ -0.42
TCD2YKL027W SEC23P15303 768 aaKnown RBP12.42□□□□□ -0.42
TCD2YKL027W NOP4P37838 685 aaKnown RBP12.42□□□□□ -0.42
TCD2YKL027W PCH2P38126 564 aa12.42□□□□□ -0.42
TCD2YKL027W SIP5P40210 489 aaKnown RBP12.42□□□□□ -0.42
TCD2YKL027W PHO86P46956 311 aa12.42□□□□□ -0.42
TCD2YKL027W MET13P53128 600 aa12.42□□□□□ -0.42
TCD2YKL027W SPC98P53540 846 aa12.42□□□□□ -0.42
TCD2YKL027W EMI2Q04409 500 aaKnown RBP12.42□□□□□ -0.42
TCD2YKL027W SPT2P06843 333 aaPredicted RBP12.41□□□□□ -0.42
TCD2YKL027W CIT2P08679 460 aa12.41□□□□□ -0.42
TCD2YKL027W YER152CP10356 443 aa12.41□□□□□ -0.42
TCD2YKL027W MFT1P33441 392 aaKnown RBP12.41□□□□□ -0.42
TCD2YKL027W YMC2P38087 329 aa12.41□□□□□ -0.42
TCD2YKL027W AGP2P38090 596 aa12.41□□□□□ -0.42
TCD2YKL027W SHE3P38272 425 aaKnown RBP12.41□□□□□ -0.42
TCD2YKL027W EXO5P38289 585 aa12.41□□□□□ -0.42
TCD2YKL027W GEM1P39722 662 aa12.41□□□□□ -0.42
TCD2YKL027W OSW7P43611 510 aa12.41□□□□□ -0.42
TCD2YKL027W MZM1Q03429 123 aaPredicted RBP12.41□□□□□ -0.42
TCD2YKL027W DAS2Q12084 232 aa12.41□□□□□ -0.42
TCD2YKL027W YOL098CQ12496 1037 aa12.41□□□□□ -0.42
TCD2YKL027W HMT1P38074 348 aa12.4□□□□□ -0.42
TCD2YKL027W YTA12P40341 825 aa12.4□□□□□ -0.42
TCD2YKL027W YFL052WP43551 465 aa12.4□□□□□ -0.42
TCD2YKL027W ZAP1P47043 880 aa12.4□□□□□ -0.42
TCD2YKL027W YGR021WP53212 290 aa12.4□□□□□ -0.42
TCD2YKL027W SYH1Q02875 849 aaKnown RBP12.4□□□□□ -0.42
TCD2YKL027W HEH2Q03281 663 aa12.4□□□□□ -0.42
TCD2YKL027W YLR422WQ06409 1932 aa12.4□□□□□ -0.42
TCD2YKL027W TPK1P06244 397 aa12.39□□□□□ -0.43
TCD2YKL027W POL3P15436 1097 aa12.39□□□□□ -0.43
TCD2YKL027W IDI1P15496 288 aa12.39□□□□□ -0.43
TCD2YKL027W VPH1P32563 840 aaKnown RBP12.39□□□□□ -0.43
TCD2YKL027W CCC2P38995 1004 aa12.39□□□□□ -0.43
TCD2YKL027W YMR124WP39523 943 aaKnown RBP12.39□□□□□ -0.43
TCD2YKL027W SPP1Q03012 353 aa12.39□□□□□ -0.43
TCD2YKL027W MRN1Q08925 612 aaKnown RBP RIP-Chip data12.39□□□□□ -0.43not detected
TCD2YKL027W PRC1P00729 532 aa12.38□□□□□ -0.43
TCD2YKL027W ATP1P07251 545 aaKnown RBP12.38□□□□□ -0.43
TCD2YKL027W KGD2P19262 463 aaPredicted RBP12.38□□□□□ -0.43
TCD2YKL027W VBA3P25594 458 aa12.38□□□□□ -0.43
TCD2YKL027W GAC1P28006 793 aa12.38□□□□□ -0.43
TCD2YKL027W HXT1P32465 570 aa12.38□□□□□ -0.43
TCD2YKL027W SLA2P33338 968 aa12.38□□□□□ -0.43
TCD2YKL027W VBA5P36172 582 aa12.38□□□□□ -0.43
TCD2YKL027W RFS1P38234 210 aaKnown RBP12.38□□□□□ -0.43
TCD2YKL027W MCX1P38323 520 aaPredicted RBP12.38□□□□□ -0.43
TCD2YKL027W DSE1P40077 573 aa12.38□□□□□ -0.43
TCD2YKL027W PSY2P40164 858 aa12.38□□□□□ -0.43
TCD2YKL027W MMF1P40185 145 aaKnown RBP12.38□□□□□ -0.43
TCD2YKL027W MND1P53102 219 aa12.38□□□□□ -0.43
TCD2YKL027W YGL036WP53185 909 aaPredicted RBP12.38□□□□□ -0.43
TCD2YKL027W HOP2P53187 214 aa12.38□□□□□ -0.43
TCD2YKL027W PNG1Q02890 363 aa12.38□□□□□ -0.43
Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms