RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	PMI40	P29952	429 aa	Known RBP	3.04	□□□□□ -1.92
NUP82	YJL061W	CCR4	P31384	837 aa	Known RBP	3.04	□□□□□ -1.92
NUP82	YJL061W	MIP6	P38760	659 aa	Known RBP	3.04	□□□□□ -1.92
NUP82	YJL061W	PHO23	P50947	330 aa		3.04	□□□□□ -1.92
NUP82	YJL061W	GPR1	Q12361	961 aa		3.04	□□□□□ -1.92
NUP82	YJL061W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.03	□□□□□ -1.92	not detected
NUP82	YJL061W	TRM2	P33753	639 aa		3.03	□□□□□ -1.92
NUP82	YJL061W	TYS1	P36421	394 aa	Known RBP	3.03	□□□□□ -1.92
NUP82	YJL061W	CKB2	P38930	258 aa		3.03	□□□□□ -1.92
NUP82	YJL061W	ECM1	P39715	212 aa		3.03	□□□□□ -1.92
NUP82	YJL061W	YGR237C	P50089	785 aa		3.03	□□□□□ -1.92
NUP82	YJL061W	ASM4	Q05166	528 aa		3.03	□□□□□ -1.92
NUP82	YJL061W	HRR25	P29295	494 aa	Known RBP	3.02	□□□□□ -1.93
NUP82	YJL061W	EFT1	P32324	842 aa	Known RBP	3.02	□□□□□ -1.93
NUP82	YJL061W	DEF1	P35732	738 aa	Known RBP	3.02	□□□□□ -1.93
NUP82	YJL061W	APT2	P36973	181 aa		3.02	□□□□□ -1.93
NUP82	YJL061W	UBP12	P39538	1254 aa		3.02	□□□□□ -1.93
NUP82	YJL061W	FKH2	P41813	862 aa		3.02	□□□□□ -1.93
NUP82	YJL061W	PRP31	P49704	494 aa	Predicted RBP	3.02	□□□□□ -1.93
NUP82	YJL061W	ERG5	P54781	538 aa		3.02	□□□□□ -1.93
NUP82	YJL061W	DLT1	Q04216	342 aa		3.02	□□□□□ -1.93
NUP82	YJL061W	PRP19	P32523	503 aa	Known RBP	3.02	□□□□□ -1.93
NUP82	YJL061W	KTR4	P38131	464 aa		3.02	□□□□□ -1.93
NUP82	YJL061W	TDA3	P38758	523 aa		3.02	□□□□□ -1.93
NUP82	YJL061W	RET2	P43621	546 aa		3.02	□□□□□ -1.93
NUP82	YJL061W	BFA1	P47113	574 aa		3.02	□□□□□ -1.93
NUP82	YJL061W	YJR096W	P47137	282 aa		3.02	□□□□□ -1.93
NUP82	YJL061W	AMA1	P50082	593 aa		3.02	□□□□□ -1.93
NUP82	YJL061W	HFD1	Q04458	532 aa		3.02	□□□□□ -1.93
NUP82	YJL061W	FAP7	Q12055	197 aa	Predicted RBP	3.02	□□□□□ -1.93
NUP82	YJL061W	ATG11	Q12527	1178 aa		3.02	□□□□□ -1.93
NUP82	YJL061W	CAF20	P12962	161 aa	Known RBP	3.01	□□□□□ -1.93
NUP82	YJL061W	TSR4	P25040	408 aa		3.01	□□□□□ -1.93
NUP82	YJL061W	APL2	P36000	726 aa	Predicted RBP	3.01	□□□□□ -1.93
NUP82	YJL061W	MAL31	P38156	614 aa		3.01	□□□□□ -1.93
NUP82	YJL061W	ELO3	P40319	345 aa		3.01	□□□□□ -1.93
NUP82	YJL061W	BUL1	P48524	976 aa		3.01	□□□□□ -1.93
NUP82	YJL061W	GPD1	Q00055	391 aa	Known RBP	3.01	□□□□□ -1.93
NUP82	YJL061W	MTQ2	Q03920	221 aa	Predicted RBP	3.01	□□□□□ -1.93
NUP82	YJL061W	GAD1	Q04792	585 aa		3.01	□□□□□ -1.93
NUP82	YJL061W	MCM21	Q06675	368 aa		3.01	□□□□□ -1.93
NUP82	YJL061W	TUB2	P02557	457 aa	Known RBP	3.01	□□□□□ -1.93
NUP82	YJL061W	ERG4	P25340	473 aa		3.01	□□□□□ -1.93
NUP82	YJL061W	YKR075C	P36155	307 aa		3.01	□□□□□ -1.93
NUP82	YJL061W	APN2	P38207	520 aa		3.01	□□□□□ -1.93
NUP82	YJL061W	AIM21	P40563	679 aa		3.01	□□□□□ -1.93
NUP82	YJL061W	YIR042C	P40586	236 aa		3.01	□□□□□ -1.93
NUP82	YJL061W	YGR153W	P48238	217 aa		3.01	□□□□□ -1.93
NUP82	YJL061W	MRPS35	P53292	345 aa		3.01	□□□□□ -1.93
NUP82	YJL061W	ARG5,6	Q01217	863 aa		3.01	□□□□□ -1.93
NUP82	YJL061W	GSF2	Q04697	403 aa	Known RBP	3.01	□□□□□ -1.93
NUP82	YJL061W	TGL5	Q12043	749 aa		3.01	□□□□□ -1.93
NUP82	YJL061W	ADE2	P21264	571 aa	Known RBP	3	□□□□□ -1.93
NUP82	YJL061W	GRX4	P32642	244 aa		3	□□□□□ -1.93
NUP82	YJL061W	MNN4	P36044	1178 aa		3	□□□□□ -1.93
NUP82	YJL061W	TRZ1	P36159	838 aa	Predicted RBP	3	□□□□□ -1.93
NUP82	YJL061W	YEN1	P40028	759 aa		3	□□□□□ -1.93
NUP82	YJL061W	GZF3	P42944	551 aa	Known RBP	3	□□□□□ -1.93
NUP82	YJL061W	YJR039W	P47107	1121 aa		3	□□□□□ -1.93
NUP82	YJL061W	MUP1	P50276	574 aa		3	□□□□□ -1.93
NUP82	YJL061W	ARP4	P80428	489 aa		3	□□□□□ -1.93
NUP82	YJL061W	RNT1	Q02555	471 aa		3	□□□□□ -1.93
NUP82	YJL061W	REC102	Q02721	264 aa		3	□□□□□ -1.93
NUP82	YJL061W	YTM1	Q12024	460 aa	Predicted RBP	3	□□□□□ -1.93
NUP82	YJL061W	LAT1	P12695	482 aa	Known RBP	2.99	□□□□□ -1.93
NUP82	YJL061W	SSZ1	P38788	538 aa	Known RBP	2.99	□□□□□ -1.93
NUP82	YJL061W	SET2	P46995	733 aa	Known RBP	2.99	□□□□□ -1.93
NUP82	YJL061W	DCS2	Q12123	353 aa		2.99	□□□□□ -1.93
NUP82	YJL061W	SUL1	P38359	859 aa		2.99	□□□□□ -1.93
NUP82	YJL061W	GID8	P40208	455 aa		2.99	□□□□□ -1.93
NUP82	YJL061W	MSE1	P48525	536 aa		2.99	□□□□□ -1.93
NUP82	YJL061W	GPG1	P53130	126 aa		2.99	□□□□□ -1.93
NUP82	YJL061W	BRE5	P53741	515 aa	Known RBP	2.99	□□□□□ -1.93
NUP82	YJL061W	TEX1	P53851	422 aa	Known RBP	2.99	□□□□□ -1.93
NUP82	YJL061W	CTK1	Q03957	528 aa	Known RBP	2.99	□□□□□ -1.93
NUP82	YJL061W	YLR040C	Q07988	224 aa		2.99	□□□□□ -1.93
NUP82	YJL061W	FRE5	Q08908	694 aa		2.99	□□□□□ -1.93
NUP82	YJL061W	YHR112C	P38716	378 aa		2.98	□□□□□ -1.93
NUP82	YJL061W	CCT5	P40413	562 aa	Known RBP	2.98	□□□□□ -1.93
NUP82	YJL061W	GPP1	P41277	250 aa	Known RBP	2.98	□□□□□ -1.93
NUP82	YJL061W	PUS9	Q12069	462 aa		2.98	□□□□□ -1.93
NUP82	YJL061W	PPR1	P07272	904 aa	Predicted RBP	2.98	□□□□□ -1.93
NUP82	YJL061W	ALG7	P07286	448 aa		2.98	□□□□□ -1.93
NUP82	YJL061W	PYC1	P11154	1178 aa	Known RBP	2.98	□□□□□ -1.93
NUP82	YJL061W	DID4	P36108	232 aa		2.98	□□□□□ -1.93
NUP82	YJL061W	AKL1	P38080	1108 aa	Known RBP	2.98	□□□□□ -1.93
NUP82	YJL061W	YBR053C	P38235	358 aa		2.98	□□□□□ -1.93
NUP82	YJL061W	YHR202W	P38887	602 aa		2.98	□□□□□ -1.93
NUP82	YJL061W	OAF1	P39720	1047 aa	Predicted RBP	2.98	□□□□□ -1.93
NUP82	YJL061W	MNN11	P46985	422 aa	Known RBP	2.98	□□□□□ -1.93
NUP82	YJL061W	KIN4	Q01919	800 aa		2.98	□□□□□ -1.93
NUP82	YJL061W	ADY4	Q05955	493 aa		2.98	□□□□□ -1.93
NUP82	YJL061W	SSB1	P11484	613 aa	Known RBP	2.97	□□□□□ -1.93
NUP82	YJL061W	BEM4	P39011	633 aa		2.97	□□□□□ -1.93
NUP82	YJL061W	SSB2	P40150	613 aa	Known RBP	2.97	□□□□□ -1.93
NUP82	YJL061W	BAP3	P41815	604 aa		2.97	□□□□□ -1.93
NUP82	YJL061W	COX18	P53239	316 aa		2.97	□□□□□ -1.93
NUP82	YJL061W	SUN4	P53616	420 aa		2.97	□□□□□ -1.93
NUP82	YJL061W	LEE1	Q02799	301 aa	Known RBP	2.97	□□□□□ -1.93
NUP82	YJL061W	YOL073C	Q08232	322 aa		2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms