RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W NAN1Q02931 896 aaKnown RBP3.6□□□□□ -1.83
PEP8YJL053W YPR071WQ12346 211 aa3.6□□□□□ -1.83
PEP8YJL053W SIR3P06701 978 aa3.59□□□□□ -1.83
PEP8YJL053W TOP3P13099 656 aa3.59□□□□□ -1.83
PEP8YJL053W MVD1P32377 396 aaKnown RBP3.59□□□□□ -1.83
PEP8YJL053W UBS1P38290 277 aa3.59□□□□□ -1.83
PEP8YJL053W MUP3P38734 546 aa3.59□□□□□ -1.83
PEP8YJL053W BAP3P41815 604 aa3.59□□□□□ -1.83
PEP8YJL053W MTR3P48240 250 aaPredicted RBP3.59□□□□□ -1.83
PEP8YJL053W ATG4P53867 494 aa3.59□□□□□ -1.83
PEP8YJL053W PRP9P19736 530 aaKnown RBP3.58□□□□□ -1.84
PEP8YJL053W CDC11P32458 415 aa3.58□□□□□ -1.84
PEP8YJL053W HRB1P38922 454 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
PEP8YJL053W SPF1P39986 1215 aaKnown RBP3.58□□□□□ -1.84
PEP8YJL053W TEX1P53851 422 aaKnown RBP3.58□□□□□ -1.84
PEP8YJL053W CIR2Q08822 631 aa3.58□□□□□ -1.84
PEP8YJL053W DAL7P21826 554 aa3.57□□□□□ -1.84
PEP8YJL053W YOL098CQ12496 1037 aa3.57□□□□□ -1.84
PEP8YJL053W AIM44Q99299 758 aa3.57□□□□□ -1.84
PEP8YJL053W YTA7P40340 1379 aa3.56□□□□□ -1.84
PEP8YJL053W GRX1P25373 110 aaKnown RBP3.56□□□□□ -1.84
PEP8YJL053W OCA5P38738 679 aa3.56□□□□□ -1.84
PEP8YJL053W IRR1P40541 1150 aa3.56□□□□□ -1.84
PEP8YJL053W YBP2P53169 641 aa3.56□□□□□ -1.84
PEP8YJL053W CTK1Q03957 528 aaKnown RBP3.56□□□□□ -1.84
PEP8YJL053W SPO75Q07798 868 aa3.56□□□□□ -1.84
PEP8YJL053W ENV7Q12003 364 aa3.56□□□□□ -1.84
PEP8YJL053W OSH2Q12451 1283 aa3.56□□□□□ -1.84
PEP8YJL053W YOR131CQ12486 218 aa3.56□□□□□ -1.84
PEP8YJL053W NOP1P15646 327 aaKnown RBP3.55□□□□□ -1.84
PEP8YJL053W STI1P15705 589 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
PEP8YJL053W APN1P22936 367 aa3.55□□□□□ -1.84
PEP8YJL053W STE5P32917 917 aa3.55□□□□□ -1.84
PEP8YJL053W YBR284WP38150 797 aa3.55□□□□□ -1.84
PEP8YJL053W TIM54P47045 478 aa3.55□□□□□ -1.84
PEP8YJL053W FPR4Q06205 392 aaPredicted RBP3.55□□□□□ -1.84
PEP8YJL053W PHR1P05066 565 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
PEP8YJL053W RAD4P14736 754 aa3.54□□□□□ -1.84
PEP8YJL053W STE4P18851 423 aa3.54□□□□□ -1.84
PEP8YJL053W KCC4P25389 1037 aa3.54□□□□□ -1.84
PEP8YJL053W SRP40P32583 406 aaPredicted RBP3.54□□□□□ -1.84
PEP8YJL053W HBS1P32769 611 aaKnown RBP3.54□□□□□ -1.84
PEP8YJL053W PHO11P35842 467 aa3.54□□□□□ -1.84
PEP8YJL053W GMH1P36125 273 aa3.54□□□□□ -1.84
PEP8YJL053W PHO12P38693 467 aa3.54□□□□□ -1.84
PEP8YJL053W ERP6P53198 216 aa3.54□□□□□ -1.84
PEP8YJL053W STP1Q00947 519 aa3.54□□□□□ -1.84
PEP8YJL053W NSE3Q05541 303 aa3.54□□□□□ -1.84
PEP8YJL053W CDC53Q12018 815 aaKnown RBP3.54□□□□□ -1.84
PEP8YJL053W ADE5,7P07244 802 aaKnown RBP3.53□□□□□ -1.84
PEP8YJL053W YBR184WP38299 523 aa3.53□□□□□ -1.84
PEP8YJL053W OSW7P43611 510 aa3.53□□□□□ -1.84
PEP8YJL053W HSP60P19882 572 aaKnown RBP3.52□□□□□ -1.85
PEP8YJL053W YKL091CP33324 310 aaKnown RBP3.52□□□□□ -1.85
PEP8YJL053W FMO1P38866 432 aa3.52□□□□□ -1.85
PEP8YJL053W NUP60P39705 539 aa3.52□□□□□ -1.85
PEP8YJL053W PFD1P46988 109 aa3.52□□□□□ -1.85
PEP8YJL053W TAD1P53065 400 aa3.52□□□□□ -1.85
PEP8YJL053W MTL1P53214 551 aa3.52□□□□□ -1.85
PEP8YJL053W LRS4Q04087 347 aaKnown RBP3.52□□□□□ -1.85
PEP8YJL053W STE12P13574 688 aa3.51□□□□□ -1.85
PEP8YJL053W GAL11P19659 1081 aa3.51□□□□□ -1.85
PEP8YJL053W SAT4P25333 603 aaKnown RBP3.51□□□□□ -1.85
PEP8YJL053W YCL002CP25565 263 aa3.51□□□□□ -1.85
PEP8YJL053W ARE1P25628 610 aa3.51□□□□□ -1.85
PEP8YJL053W FUB1P25659 250 aa3.51□□□□□ -1.85
PEP8YJL053W SET5P38890 526 aaKnown RBP3.51□□□□□ -1.85
PEP8YJL053W ECM1P39715 212 aa3.51□□□□□ -1.85
PEP8YJL053W SHR5P41912 237 aa3.51□□□□□ -1.85
PEP8YJL053W YGR125WP53273 1036 aa3.51□□□□□ -1.85
PEP8YJL053W FHN1P53279 174 aa3.51□□□□□ -1.85
PEP8YJL053W SPC98P53540 846 aa3.51□□□□□ -1.85
PEP8YJL053W YPL068CQ02749 293 aa3.51□□□□□ -1.85
PEP8YJL053W EAF1Q06337 982 aa3.51□□□□□ -1.85
PEP8YJL053W FMP25Q08023 583 aa3.51□□□□□ -1.85
PEP8YJL053W THI21Q08975 551 aa3.51□□□□□ -1.85
PEP8YJL053W USV1Q12132 391 aa3.51□□□□□ -1.85
PEP8YJL053W RPL8BP29453 256 aaKnown RBP3.5□□□□□ -1.85
PEP8YJL053W HUL4P40985 892 aa3.5□□□□□ -1.85
PEP8YJL053W ALR2P43553 858 aa3.5□□□□□ -1.85
PEP8YJL053W PRP31P49704 494 aaPredicted RBP3.5□□□□□ -1.85
PEP8YJL053W HUL5P53119 910 aa3.5□□□□□ -1.85
PEP8YJL053W UTP8P53276 713 aaKnown RBP3.5□□□□□ -1.85
PEP8YJL053W ORC1P54784 914 aaPredicted RBP3.5□□□□□ -1.85
PEP8YJL053W YDL124WQ07551 312 aaKnown RBP3.5□□□□□ -1.85
PEP8YJL053W MLH3Q12083 715 aa3.5□□□□□ -1.85
PEP8YJL053W CIT1P00890 479 aa3.49□□□□□ -1.85
PEP8YJL053W TAX4P47030 604 aa3.49□□□□□ -1.85
PEP8YJL053W RPN4Q03465 531 aa3.49□□□□□ -1.85
PEP8YJL053W GEP3Q08622 556 aa3.49□□□□□ -1.85
PEP8YJL053W FLC1Q08967 793 aa3.49□□□□□ -1.85
PEP8YJL053W GPR1Q12361 961 aa3.49□□□□□ -1.85
PEP8YJL053W ZRT2Q12436 422 aa3.49□□□□□ -1.85
PEP8YJL053W UGP1P32861 499 aaKnown RBP3.48□□□□□ -1.85
PEP8YJL053W PET10P36139 283 aa3.48□□□□□ -1.85
PEP8YJL053W APT2P36973 181 aa3.48□□□□□ -1.85
PEP8YJL053W CHZ1P40019 153 aaPredicted RBP3.48□□□□□ -1.85
PEP8YJL053W ULP2P40537 1034 aaPredicted RBP3.48□□□□□ -1.85
PEP8YJL053W PBP2P38151 413 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
PEP8YJL053W YHR020WP38708 688 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 96.3 ms