RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA7, Length 357 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA7	YGR020C	DOT6	P40059	670 aa	Known RBP	5.05	□□□□□ -1.6
VMA7	YGR020C	ORC4	P54791	529 aa		5.05	□□□□□ -1.6
VMA7	YGR020C	RPN7	Q06103	429 aa	Known RBP	5.05	□□□□□ -1.6
VMA7	YGR020C	NOP14	Q99207	810 aa	Known RBP	5.05	□□□□□ -1.6
VMA7	YGR020C	YBR053C	P38235	358 aa		5.04	□□□□□ -1.6
VMA7	YGR020C	YIR042C	P40586	236 aa		5.04	□□□□□ -1.6
VMA7	YGR020C	PRP31	P49704	494 aa	Predicted RBP	5.04	□□□□□ -1.6
VMA7	YGR020C	UBC9	P50623	157 aa	Predicted RBP	5.04	□□□□□ -1.6
VMA7	YGR020C	ADY4	Q05955	493 aa		5.04	□□□□□ -1.6
VMA7	YGR020C	ATG33	Q06485	197 aa		5.04	□□□□□ -1.6
VMA7	YGR020C	LAT1	P12695	482 aa	Known RBP	5.03	□□□□□ -1.6
VMA7	YGR020C	SFL1	P20134	766 aa		5.03	□□□□□ -1.6
VMA7	YGR020C	MIP6	P38760	659 aa	Known RBP	5.03	□□□□□ -1.6
VMA7	YGR020C	ECM1	P39715	212 aa		5.03	□□□□□ -1.6
VMA7	YGR020C	AIM14	P53109	570 aa		5.03	□□□□□ -1.6
VMA7	YGR020C	YNL193W	P53870	558 aa		5.03	□□□□□ -1.6
VMA7	YGR020C	YMR206W	Q03695	313 aa		5.03	□□□□□ -1.6
VMA7	YGR020C	YLR001C	Q07895	862 aa		5.03	□□□□□ -1.6
VMA7	YGR020C	ATG11	Q12527	1178 aa		5.03	□□□□□ -1.6
VMA7	YGR020C	HMG1	P12683	1054 aa		5.02	□□□□□ -1.61
VMA7	YGR020C	SFP1	P32432	683 aa		5.02	□□□□□ -1.61
VMA7	YGR020C	OAR1	P35731	278 aa		5.02	□□□□□ -1.61
VMA7	YGR020C	YKR018C	P36114	725 aa		5.02	□□□□□ -1.61
VMA7	YGR020C	PPS1	P38148	807 aa		5.02	□□□□□ -1.61
VMA7	YGR020C	MOH1	P38191	138 aa		5.02	□□□□□ -1.61
VMA7	YGR020C	PCM1	P38628	557 aa	Known RBP	5.02	□□□□□ -1.61
VMA7	YGR020C	TEX1	P53851	422 aa	Known RBP	5.02	□□□□□ -1.61
VMA7	YGR020C	GAD1	Q04792	585 aa		5.02	□□□□□ -1.61
VMA7	YGR020C	OMS1	Q06668	471 aa		5.02	□□□□□ -1.61
VMA7	YGR020C	GIN4	Q12263	1142 aa		5.02	□□□□□ -1.61
VMA7	YGR020C	RPL8A	P17076	256 aa	Known RBP	5.01	□□□□□ -1.61
VMA7	YGR020C	ADE2	P21264	571 aa	Known RBP	5.01	□□□□□ -1.61
VMA7	YGR020C	YJL163C	P46996	555 aa		5.01	□□□□□ -1.61
VMA7	YGR020C	PCL10	P53124	433 aa		5.01	□□□□□ -1.61
VMA7	YGR020C	UTP14	Q04500	899 aa	Known RBP	5.01	□□□□□ -1.61
VMA7	YGR020C	ACF2	Q12168	779 aa		5.01	□□□□□ -1.61
VMA7	YGR020C	APL2	P36000	726 aa	Predicted RBP	5	□□□□□ -1.61
VMA7	YGR020C	APT2	P36973	181 aa		5	□□□□□ -1.61
VMA7	YGR020C	YHR112C	P38716	378 aa		5	□□□□□ -1.61
VMA7	YGR020C	DAS1	P47005	663 aa		5	□□□□□ -1.61
VMA7	YGR020C	STB4	P50104	949 aa		5	□□□□□ -1.61
VMA7	YGR020C	MET13	P53128	600 aa		5	□□□□□ -1.61
VMA7	YGR020C	DNM1	P54861	757 aa		5	□□□□□ -1.61
VMA7	YGR020C	ARG5,6	Q01217	863 aa		5	□□□□□ -1.61
VMA7	YGR020C	IRC13	Q08630	104 aa		5	□□□□□ -1.61
VMA7	YGR020C	CCR4	P31384	837 aa	Known RBP	4.99	□□□□□ -1.61
VMA7	YGR020C	HIS7	P33734	552 aa	Known RBP	4.99	□□□□□ -1.61
VMA7	YGR020C	HOS4	P40480	1083 aa		4.99	□□□□□ -1.61
VMA7	YGR020C	TIM44	Q01852	431 aa		4.99	□□□□□ -1.61
VMA7	YGR020C	MUK1	Q02866	612 aa		4.99	□□□□□ -1.61
VMA7	YGR020C	GUD1	Q07729	489 aa		4.99	□□□□□ -1.61
VMA7	YGR020C	MCH5	Q08777	521 aa		4.99	□□□□□ -1.61
VMA7	YGR020C	TRZ1	P36159	838 aa	Predicted RBP	4.98	□□□□□ -1.61
VMA7	YGR020C	BCD1	P38772	366 aa		4.98	□□□□□ -1.61
VMA7	YGR020C	BAP3	P41815	604 aa		4.98	□□□□□ -1.61
VMA7	YGR020C	UBA2	P52488	636 aa		4.98	□□□□□ -1.61
VMA7	YGR020C	SDA1	P53313	767 aa	Known RBP	4.98	□□□□□ -1.61
VMA7	YGR020C	CTK1	Q03957	528 aa	Known RBP	4.98	□□□□□ -1.61
VMA7	YGR020C	MCM21	Q06675	368 aa		4.98	□□□□□ -1.61
VMA7	YGR020C	ADR1	P07248	1323 aa		4.97	□□□□□ -1.61
VMA7	YGR020C	MNN4	P36044	1178 aa		4.97	□□□□□ -1.61
VMA7	YGR020C	YHL017W	P38745	532 aa		4.97	□□□□□ -1.61
VMA7	YGR020C	MGS1	P40151	587 aa		4.97	□□□□□ -1.61
VMA7	YGR020C	UBC11	P52492	156 aa		4.97	□□□□□ -1.61
VMA7	YGR020C	ARP4	P80428	489 aa		4.97	□□□□□ -1.61
VMA7	YGR020C	CCT3	P39077	534 aa	Known RBP	4.96	□□□□□ -1.62
VMA7	YGR020C	HLJ1	P48353	224 aa		4.96	□□□□□ -1.62
VMA7	YGR020C	MTL1	P53214	551 aa		4.96	□□□□□ -1.62
VMA7	YGR020C	RIA1	P53893	1110 aa		4.96	□□□□□ -1.62
VMA7	YGR020C	REC102	Q02721	264 aa		4.96	□□□□□ -1.62
VMA7	YGR020C	LEE1	Q02799	301 aa	Known RBP	4.96	□□□□□ -1.62
VMA7	YGR020C	FPR3	P38911	411 aa	Known RBP	4.95	□□□□□ -1.62
VMA7	YGR020C	FMP52	P40008	231 aa		4.95	□□□□□ -1.62
VMA7	YGR020C	GID8	P40208	455 aa		4.95	□□□□□ -1.62
VMA7	YGR020C	BRE5	P53741	515 aa	Known RBP	4.95	□□□□□ -1.62
VMA7	YGR020C	TMN2	Q04562	672 aa		4.95	□□□□□ -1.62
VMA7	YGR020C	HBT1	Q07653	1046 aa	Known RBP	4.95	□□□□□ -1.62
VMA7	YGR020C	ERG6	P25087	383 aa	Known RBP	4.94	□□□□□ -1.62
VMA7	YGR020C	APN2	P38207	520 aa		4.94	□□□□□ -1.62
VMA7	YGR020C	SSZ1	P38788	538 aa	Known RBP	4.94	□□□□□ -1.62
VMA7	YGR020C	PCL5	P38794	229 aa		4.94	□□□□□ -1.62
VMA7	YGR020C	REV7	P38927	245 aa		4.94	□□□□□ -1.62
VMA7	YGR020C	LYS9	P38999	446 aa		4.94	□□□□□ -1.62
VMA7	YGR020C	SET2	P46995	733 aa	Known RBP	4.94	□□□□□ -1.62
VMA7	YGR020C	SGO1	Q08490	590 aa		4.94	□□□□□ -1.62
VMA7	YGR020C	HRP1	Q99383	534 aa	Known RBP	4.94	□□□□□ -1.62
VMA7	YGR020C	RNR1	P21524	888 aa	Known RBP	4.93	□□□□□ -1.62
VMA7	YGR020C	MVD1	P32377	396 aa	Known RBP	4.93	□□□□□ -1.62
VMA7	YGR020C	HIR1	P32479	840 aa		4.93	□□□□□ -1.62
VMA7	YGR020C	FMO1	P38866	432 aa		4.93	□□□□□ -1.62
VMA7	YGR020C	NUP60	P39705	539 aa		4.93	□□□□□ -1.62
VMA7	YGR020C	YJR039W	P47107	1121 aa		4.93	□□□□□ -1.62
VMA7	YGR020C	YJR142W	P47173	342 aa		4.93	□□□□□ -1.62
VMA7	YGR020C	TEL2	P53038	688 aa		4.93	□□□□□ -1.62
VMA7	YGR020C	COX18	P53239	316 aa		4.93	□□□□□ -1.62
VMA7	YGR020C	GPD1	Q00055	391 aa	Known RBP	4.93	□□□□□ -1.62
VMA7	YGR020C	HMO1	Q03973	246 aa	Known RBP	4.93	□□□□□ -1.62
VMA7	YGR020C	DCS2	Q12123	353 aa		4.93	□□□□□ -1.62
VMA7	YGR020C	YGR161W-C	Q3E744	92 aa		4.93	□□□□□ -1.62
VMA7	YGR020C	PYC1	P11154	1178 aa	Known RBP	4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 177.6 ms