RNA–Protein interactions for RNA: YFL028C

CAF16, Transcript of Part of evolutionarily-conserved CCR4-NOT regulatory complex, yeast

Gene CAF16, Length 870 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	YFL028C	DAL3	P32459	195 aa		5.87	□□□□□ -1.47
CAF16	YFL028C	TYE7	P33122	291 aa	Predicted RBP	5.87	□□□□□ -1.47
CAF16	YFL028C	ABZ1	P37254	787 aa	Predicted RBP	5.87	□□□□□ -1.47
CAF16	YFL028C	SET5	P38890	526 aa	Known RBP	5.87	□□□□□ -1.47
CAF16	YFL028C	NPY1	P53164	384 aa		5.87	□□□□□ -1.47
CAF16	YFL028C	YNL034W	P53963	612 aa		5.87	□□□□□ -1.47
CAF16	YFL028C	YNL018C	P53976	612 aa		5.87	□□□□□ -1.47
CAF16	YFL028C	YKR011C	Q02209	353 aa		5.87	□□□□□ -1.47
CAF16	YFL028C	RSM24	Q03976	319 aa		5.87	□□□□□ -1.47
CAF16	YFL028C	URN1	Q06525	465 aa	Known RBP	5.87	□□□□□ -1.47
CAF16	YFL028C	RIB2	Q12362	591 aa	Known RBP	5.87	□□□□□ -1.47
CAF16	YFL028C	YPR053C	Q6Q5F3	151 aa		5.87	□□□□□ -1.47
CAF16	YFL028C	HAP1	P0CE41	1502 aa		5.86	□□□□□ -1.47
CAF16	YFL028C	ENA1	P13587	1091 aa		5.86	□□□□□ -1.47
CAF16	YFL028C	CCR4	P31384	837 aa	Known RBP	5.86	□□□□□ -1.47
CAF16	YFL028C	HIR1	P32479	840 aa		5.86	□□□□□ -1.47
CAF16	YFL028C	YFL052W	P43551	465 aa		5.86	□□□□□ -1.47
CAF16	YFL028C	DUG1	P43616	481 aa	Known RBP	5.86	□□□□□ -1.47
CAF16	YFL028C	RET2	P43621	546 aa		5.86	□□□□□ -1.47
CAF16	YFL028C	MNN11	P46985	422 aa	Known RBP	5.86	□□□□□ -1.47
CAF16	YFL028C	TGL2	P54857	326 aa		5.86	□□□□□ -1.47
CAF16	YFL028C	ENA2	Q01896	1091 aa		5.86	□□□□□ -1.47
CAF16	YFL028C	YLR122C	Q12312	125 aa		5.86	□□□□□ -1.47
CAF16	YFL028C	RMP1	Q12530	201 aa		5.86	□□□□□ -1.47
CAF16	YFL028C	ENA5	Q12691	1091 aa		5.86	□□□□□ -1.47
CAF16	YFL028C	PDR11	P40550	1411 aa		5.85	□□□□□ -1.47
CAF16	YFL028C	PGM1	P33401	570 aa	Known RBP	5.85	□□□□□ -1.47
CAF16	YFL028C	YKR051W	P36142	418 aa		5.85	□□□□□ -1.47
CAF16	YFL028C	PEA2	P40091	420 aa		5.85	□□□□□ -1.47
CAF16	YFL028C	YIL108W	P40483	696 aa	Known RBP	5.85	□□□□□ -1.47
CAF16	YFL028C	HAL9	Q12180	1030 aa		5.85	□□□□□ -1.47
CAF16	YFL028C	Q0142	Q9ZZW4	58 aa		5.85	□□□□□ -1.47
CAF16	YFL028C	GCD1	P09032	578 aa	Predicted RBP	5.84	□□□□□ -1.47
CAF16	YFL028C	HSF1	P10961	833 aa		5.84	□□□□□ -1.47
CAF16	YFL028C	ADP1	P25371	1049 aa		5.84	□□□□□ -1.47
CAF16	YFL028C	ZRG8	P40021	1076 aa		5.84	□□□□□ -1.47
CAF16	YFL028C	GPP2	P40106	250 aa	Known RBP	5.84	□□□□□ -1.47
CAF16	YFL028C	NIT2	P47016	307 aa		5.84	□□□□□ -1.47
CAF16	YFL028C	YGR012W	P53206	393 aa		5.84	□□□□□ -1.47
CAF16	YFL028C	YGR130C	P53278	816 aa		5.84	□□□□□ -1.47
CAF16	YFL028C	SUB1	P54000	292 aa	Known RBP	5.84	□□□□□ -1.47
CAF16	YFL028C	ECM9	Q02202	377 aa		5.84	□□□□□ -1.47
CAF16	YFL028C	MSC2	Q03455	724 aa		5.84	□□□□□ -1.47
CAF16	YFL028C	SSL1	Q04673	461 aa	Predicted RBP	5.84	□□□□□ -1.47
CAF16	YFL028C	RPN7	Q06103	429 aa	Known RBP	5.84	□□□□□ -1.47
CAF16	YFL028C	ATP4	P05626	244 aa		5.83	□□□□□ -1.48
CAF16	YFL028C	KAR1	P11927	433 aa		5.83	□□□□□ -1.48
CAF16	YFL028C	SST2	P11972	698 aa	Known RBP	5.83	□□□□□ -1.48
CAF16	YFL028C	KAE1	P36132	386 aa		5.83	□□□□□ -1.48
CAF16	YFL028C	CCT5	P40413	562 aa	Known RBP	5.83	□□□□□ -1.48
CAF16	YFL028C	FOL2	P51601	243 aa	Known RBP	5.83	□□□□□ -1.48
CAF16	YFL028C	MAK10	Q02197	733 aa		5.83	□□□□□ -1.48
CAF16	YFL028C	YPL034W	Q03083	165 aa		5.83	□□□□□ -1.48
CAF16	YFL028C	CDA1	Q06702	301 aa		5.83	□□□□□ -1.48
CAF16	YFL028C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.83	□□□□□ -1.48	not detected
CAF16	YFL028C	PHM7	Q12252	991 aa		5.83	□□□□□ -1.48
CAF16	YFL028C	USO1	P25386	1790 aa		5.83	□□□□□ -1.48
CAF16	YFL028C	CMP2	P14747	604 aa		5.82	□□□□□ -1.48
CAF16	YFL028C	DID4	P36108	232 aa		5.82	□□□□□ -1.48
CAF16	YFL028C	THI21	Q08975	551 aa		5.82	□□□□□ -1.48
CAF16	YFL028C	SWE1	P32944	819 aa		5.81	□□□□□ -1.48
CAF16	YFL028C	POA1	P38218	177 aa		5.81	□□□□□ -1.48
CAF16	YFL028C	DUS1	P53759	423 aa	Known RBP	5.81	□□□□□ -1.48
CAF16	YFL028C	YHM2	Q04013	314 aa		5.81	□□□□□ -1.48
CAF16	YFL028C	SIZ1	Q04195	904 aa		5.81	□□□□□ -1.48
CAF16	YFL028C	YLR149C	Q99296	730 aa		5.81	□□□□□ -1.48
CAF16	YFL028C	CYC7	P00045	113 aa		5.8	□□□□□ -1.48
CAF16	YFL028C	FLR1	P38124	548 aa		5.8	□□□□□ -1.48
CAF16	YFL028C	FUI1	P38196	639 aa		5.8	□□□□□ -1.48
CAF16	YFL028C	BIT2	P38346	545 aa		5.8	□□□□□ -1.48
CAF16	YFL028C	SKN7	P38889	622 aa		5.8	□□□□□ -1.48
CAF16	YFL028C	BNA2	P47125	453 aa		5.8	□□□□□ -1.48
CAF16	YFL028C	PSP2	P50109	593 aa	Known RBP	5.8	□□□□□ -1.48
CAF16	YFL028C	ZIP2	P53061	704 aa		5.8	□□□□□ -1.48
CAF16	YFL028C	PTA1	Q01329	785 aa	Predicted RBP	5.8	□□□□□ -1.48
CAF16	YFL028C	PHM6	Q05637	104 aa		5.8	□□□□□ -1.48
CAF16	YFL028C	YPL277C	Q08989	487 aa		5.8	□□□□□ -1.48
CAF16	YFL028C	YPR027C	Q12079	277 aa		5.8	□□□□□ -1.48
CAF16	YFL028C	RPS21B	Q3E754	87 aa	Known RBP	5.8	□□□□□ -1.48
CAF16	YFL028C	CYC1	P00044	109 aa	Predicted RBP	5.79	□□□□□ -1.48
CAF16	YFL028C	RPS21A	P0C0V8	87 aa	Known RBP	5.79	□□□□□ -1.48
CAF16	YFL028C	PWP2	P25635	923 aa	Known RBP	5.79	□□□□□ -1.48
CAF16	YFL028C	HSP78	P33416	811 aa		5.79	□□□□□ -1.48
CAF16	YFL028C	NIC96	P34077	839 aa		5.79	□□□□□ -1.48
CAF16	YFL028C	MNN4	P36044	1178 aa		5.79	□□□□□ -1.48
CAF16	YFL028C	VPS24	P36095	224 aa	Known RBP	5.79	□□□□□ -1.48
CAF16	YFL028C	SPC105	P53148	917 aa		5.79	□□□□□ -1.48
CAF16	YFL028C	LPX1	Q12405	387 aa	Known RBP	5.79	□□□□□ -1.48
CAF16	YFL028C	GAL10	P04397	699 aa		5.78	□□□□□ -1.48
CAF16	YFL028C	SPE1	P08432	466 aa		5.78	□□□□□ -1.48
CAF16	YFL028C	COX11	P19516	300 aa	Known RBP	5.78	□□□□□ -1.48
CAF16	YFL028C	YKR018C	P36114	725 aa		5.78	□□□□□ -1.48
CAF16	YFL028C	HXT6	P39003	570 aa	Known RBP	5.78	□□□□□ -1.48
CAF16	YFL028C	HXT7	P39004	570 aa		5.78	□□□□□ -1.48
CAF16	YFL028C	BFA1	P47113	574 aa		5.78	□□□□□ -1.48
CAF16	YFL028C	ENV11	P53246	860 aa		5.78	□□□□□ -1.48
CAF16	YFL028C	MET14	Q02196	202 aa		5.78	□□□□□ -1.48
CAF16	YFL028C	VMS1	Q04311	632 aa	Known RBP	5.78	□□□□□ -1.48
CAF16	YFL028C	RAV1	P47104	1357 aa		5.78	□□□□□ -1.48
CAF16	YFL028C	TY1B-NL2	Q99337	1749 aa	Known RBP	5.77	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 26 ms