RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN9	YDR427W	GSY1	P23337	708 aa		5.03	□□□□□ -1.6
RPN9	YDR427W	PPG1	P32838	368 aa		5.03	□□□□□ -1.6
RPN9	YDR427W	MCD4	P36051	919 aa		5.03	□□□□□ -1.6
RPN9	YDR427W	RLP7	P40693	322 aa	Known RBP	5.03	□□□□□ -1.6
RPN9	YDR427W	FKH2	P41813	862 aa		5.03	□□□□□ -1.6
RPN9	YDR427W	CAF16	P43569	289 aa		5.03	□□□□□ -1.6
RPN9	YDR427W	RIA1	P53893	1110 aa		5.03	□□□□□ -1.6
RPN9	YDR427W	PRC1	P00729	532 aa		5.02	□□□□□ -1.61
RPN9	YDR427W	PER1	P25625	357 aa		5.02	□□□□□ -1.61
RPN9	YDR427W	STO1	P34160	861 aa	Known RBP	5.02	□□□□□ -1.61
RPN9	YDR427W	SET5	P38890	526 aa	Known RBP	5.02	□□□□□ -1.61
RPN9	YDR427W	ZDS1	P50111	915 aa	Known RBP	5.02	□□□□□ -1.61
RPN9	YDR427W	VBA3	P25594	458 aa		5.01	□□□□□ -1.61
RPN9	YDR427W	DSS1	P39112	969 aa		5.01	□□□□□ -1.61
RPN9	YDR427W	YJL163C	P46996	555 aa		5.01	□□□□□ -1.61
RPN9	YDR427W	AMA1	P50082	593 aa		5.01	□□□□□ -1.61
RPN9	YDR427W	MRPS35	P53292	345 aa		5.01	□□□□□ -1.61
RPN9	YDR427W	ASI2	P53895	289 aa		5.01	□□□□□ -1.61
RPN9	YDR427W	YDR338C	Q05497	695 aa		5.01	□□□□□ -1.61
RPN9	YDR427W	ARO10	Q06408	635 aa		5.01	□□□□□ -1.61
RPN9	YDR427W	DIF1	O13577	133 aa		5	□□□□□ -1.61
RPN9	YDR427W	VHR1	P40522	640 aa		5	□□□□□ -1.61
RPN9	YDR427W	SSY5	P47002	699 aa		5	□□□□□ -1.61
RPN9	YDR427W	ZIP2	P53061	704 aa		5	□□□□□ -1.61
RPN9	YDR427W	SEC5	P89102	971 aa		5	□□□□□ -1.61
RPN9	YDR427W	SNP1	Q00916	300 aa	Predicted RBP	5	□□□□□ -1.61
RPN9	YDR427W	GPR1	Q12361	961 aa		5	□□□□□ -1.61
RPN9	YDR427W	SRD1	P09007	221 aa		4.99	□□□□□ -1.61
RPN9	YDR427W	TMT1	P32643	299 aa		4.99	□□□□□ -1.61
RPN9	YDR427W	YEL1	P34225	687 aa		4.99	□□□□□ -1.61
RPN9	YDR427W	SAP190	P36123	1033 aa		4.99	□□□□□ -1.61
RPN9	YDR427W	FLO10	P36170	1169 aa		4.99	□□□□□ -1.61
RPN9	YDR427W	ALY2	P47029	1046 aa		4.99	□□□□□ -1.61
RPN9	YDR427W	MUS81	Q04149	632 aa	Predicted RBP	4.99	□□□□□ -1.61
RPN9	YDR427W	YLR001C	Q07895	862 aa		4.99	□□□□□ -1.61
RPN9	YDR427W	DMC1	P25453	334 aa		4.98	□□□□□ -1.61
RPN9	YDR427W	YBR053C	P38235	358 aa		4.98	□□□□□ -1.61
RPN9	YDR427W	MNN1	P39106	762 aa		4.98	□□□□□ -1.61
RPN9	YDR427W	GLO1	P50107	326 aa		4.98	□□□□□ -1.61
RPN9	YDR427W	COG8	Q04632	607 aa		4.98	□□□□□ -1.61
RPN9	YDR427W	MIH1	P23748	554 aa		4.97	□□□□□ -1.61
RPN9	YDR427W	ADY2	P25613	283 aa		4.97	□□□□□ -1.61
RPN9	YDR427W	HOG1	P32485	435 aa		4.97	□□□□□ -1.61
RPN9	YDR427W	PZF1	P39933	429 aa		4.97	□□□□□ -1.61
RPN9	YDR427W	SHR5	P41912	237 aa		4.97	□□□□□ -1.61
RPN9	YDR427W	PKH1	Q03407	766 aa		4.97	□□□□□ -1.61
RPN9	YDR427W	THI7	Q05998	598 aa		4.97	□□□□□ -1.61
RPN9	YDR427W	NOP14	Q99207	810 aa	Known RBP	4.97	□□□□□ -1.61
RPN9	YDR427W	PCL2	P25693	308 aa		4.96	□□□□□ -1.62
RPN9	YDR427W	NGG1	P32494	702 aa		4.96	□□□□□ -1.62
RPN9	YDR427W	SAK1	P38990	1142 aa		4.96	□□□□□ -1.62
RPN9	YDR427W	PFA3	P42836	336 aa		4.96	□□□□□ -1.62
RPN9	YDR427W	BNA2	P47125	453 aa		4.96	□□□□□ -1.62
RPN9	YDR427W	DOS2	P54858	310 aa		4.96	□□□□□ -1.62
RPN9	YDR427W	TFB2	Q02939	513 aa		4.96	□□□□□ -1.62
RPN9	YDR427W	ASM4	Q05166	528 aa		4.96	□□□□□ -1.62
RPN9	YDR427W	YLR415C	O13578	112 aa		4.95	□□□□□ -1.62
RPN9	YDR427W	RPL8A	P17076	256 aa	Known RBP	4.95	□□□□□ -1.62
RPN9	YDR427W	RPN10	P38886	268 aa	Known RBP	4.95	□□□□□ -1.62
RPN9	YDR427W	YNL193W	P53870	558 aa		4.95	□□□□□ -1.62
RPN9	YDR427W	SSL2	Q00578	843 aa		4.95	□□□□□ -1.62
RPN9	YDR427W	NHX1	Q04121	633 aa		4.95	□□□□□ -1.62
RPN9	YDR427W	UTP14	Q04500	899 aa	Known RBP	4.95	□□□□□ -1.62
RPN9	YDR427W	YLR149C	Q99296	730 aa		4.95	□□□□□ -1.62
RPN9	YDR427W	RAD18	P10862	487 aa		4.94	□□□□□ -1.62
RPN9	YDR427W	PCM1	P38628	557 aa	Known RBP	4.94	□□□□□ -1.62
RPN9	YDR427W	DNM1	P54861	757 aa		4.94	□□□□□ -1.62
RPN9	YDR427W	ATG33	Q06485	197 aa		4.94	□□□□□ -1.62
RPN9	YDR427W	SGO1	Q08490	590 aa		4.94	□□□□□ -1.62
RPN9	YDR427W	SPO11	P23179	398 aa		4.93	□□□□□ -1.62
RPN9	YDR427W	CBR1	P38626	284 aa	Known RBP	4.93	□□□□□ -1.62
RPN9	YDR427W	SIC1	P38634	284 aa		4.93	□□□□□ -1.62
RPN9	YDR427W	YIR042C	P40586	236 aa		4.93	□□□□□ -1.62
RPN9	YDR427W	APM1	Q00776	475 aa	Predicted RBP	4.93	□□□□□ -1.62
RPN9	YDR427W	SFL1	P20134	766 aa		4.92	□□□□□ -1.62
RPN9	YDR427W	HSL7	P38274	827 aa		4.92	□□□□□ -1.62
RPN9	YDR427W	FPR3	P38911	411 aa	Known RBP	4.92	□□□□□ -1.62
RPN9	YDR427W	MGS1	P40151	587 aa		4.92	□□□□□ -1.62
RPN9	YDR427W	MTR3	P48240	250 aa	Predicted RBP	4.92	□□□□□ -1.62
RPN9	YDR427W	IRC13	Q08630	104 aa		4.92	□□□□□ -1.62
RPN9	YDR427W	HMG1	P12683	1054 aa		4.91	□□□□□ -1.62
RPN9	YDR427W	YKR051W	P36142	418 aa		4.91	□□□□□ -1.62
RPN9	YDR427W	MIP6	P38760	659 aa	Known RBP	4.91	□□□□□ -1.62
RPN9	YDR427W	MET13	P53128	600 aa		4.91	□□□□□ -1.62
RPN9	YDR427W	NPY1	P53164	384 aa		4.91	□□□□□ -1.62
RPN9	YDR427W	NRG1	Q03125	231 aa		4.91	□□□□□ -1.62
RPN9	YDR427W	GIN4	Q12263	1142 aa		4.91	□□□□□ -1.62
RPN9	YDR427W	AIM44	Q99299	758 aa		4.91	□□□□□ -1.62
RPN9	YDR427W	Q0142	Q9ZZW4	58 aa		4.91	□□□□□ -1.62
RPN9	YDR427W	CCR4	P31384	837 aa	Known RBP	4.9	□□□□□ -1.63
RPN9	YDR427W	HIS7	P33734	552 aa	Known RBP	4.9	□□□□□ -1.63
RPN9	YDR427W	YKR018C	P36114	725 aa		4.9	□□□□□ -1.63
RPN9	YDR427W	YBR259W	P38338	688 aa		4.9	□□□□□ -1.63
RPN9	YDR427W	ECM1	P39715	212 aa		4.9	□□□□□ -1.63
RPN9	YDR427W	FMP52	P40008	231 aa		4.9	□□□□□ -1.63
RPN9	YDR427W	YFL052W	P43551	465 aa		4.9	□□□□□ -1.63
RPN9	YDR427W	AIM14	P53109	570 aa		4.9	□□□□□ -1.63
RPN9	YDR427W	LAT1	P12695	482 aa	Known RBP	4.89	□□□□□ -1.63
RPN9	YDR427W	SFP1	P32432	683 aa		4.89	□□□□□ -1.63
RPN9	YDR427W	YJR142W	P47173	342 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 88.5 ms