RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C YPR196WQ06595 470 aa5.59□□□□□ -1.51
RPB7YDR404C REH1Q06709 432 aa5.59□□□□□ -1.51
RPB7YDR404C GUD1Q07729 489 aa5.59□□□□□ -1.51
RPB7YDR404C SRB8P25648 1427 aa5.58□□□□□ -1.52
RPB7YDR404C KIN2P13186 1147 aaKnown RBP5.58□□□□□ -1.52
RPB7YDR404C DAL7P21826 554 aa5.58□□□□□ -1.52
RPB7YDR404C PRP19P32523 503 aaKnown RBP5.58□□□□□ -1.52
RPB7YDR404C TOD6P34219 525 aa5.58□□□□□ -1.52
RPB7YDR404C CKB2P38930 258 aa5.58□□□□□ -1.52
RPB7YDR404C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
RPB7YDR404C XYL2Q07993 356 aa5.58□□□□□ -1.52
RPB7YDR404C ESC8Q08119 714 aa5.58□□□□□ -1.52
RPB7YDR404C YPL277CQ08989 487 aa5.58□□□□□ -1.52
RPB7YDR404C OSW2Q12202 724 aa5.58□□□□□ -1.52
RPB7YDR404C GIN4Q12263 1142 aa5.58□□□□□ -1.52
RPB7YDR404C HMG1P12683 1054 aa5.57□□□□□ -1.52
RPB7YDR404C RFA1P22336 621 aaKnown RBP5.57□□□□□ -1.52
RPB7YDR404C SEC6P32844 805 aa5.57□□□□□ -1.52
RPB7YDR404C YAP1801P38856 637 aa5.57□□□□□ -1.52
RPB7YDR404C HXT16P47185 567 aa5.57□□□□□ -1.52
RPB7YDR404C TAD1P53065 400 aa5.57□□□□□ -1.52
RPB7YDR404C TMA7Q3E764 64 aaKnown RBP5.57□□□□□ -1.52
RPB7YDR404C GCN2P15442 1659 aa5.56□□□□□ -1.52
RPB7YDR404C YCL002CP25565 263 aa5.56□□□□□ -1.52
RPB7YDR404C RPC82P32349 654 aa5.56□□□□□ -1.52
RPB7YDR404C THI80P35202 319 aa5.56□□□□□ -1.52
RPB7YDR404C ECM21P38167 1117 aaKnown RBP5.56□□□□□ -1.52
RPB7YDR404C LAM1P38851 1228 aa5.56□□□□□ -1.52
RPB7YDR404C ALY2P47029 1046 aa5.56□□□□□ -1.52
RPB7YDR404C SPT20P50875 604 aa5.56□□□□□ -1.52
RPB7YDR404C NOG2P53742 486 aaKnown RBP5.56□□□□□ -1.52
RPB7YDR404C SND1Q04007 877 aa5.56□□□□□ -1.52
RPB7YDR404C LRS4Q04087 347 aaKnown RBP5.56□□□□□ -1.52
RPB7YDR404C TRE2Q08693 809 aa5.56□□□□□ -1.52
RPB7YDR404C GUP2Q08929 609 aa5.56□□□□□ -1.52
RPB7YDR404C SLX4Q12098 748 aa5.56□□□□□ -1.52
RPB7YDR404C TY3B-IQ7LHG5 1498 aaKnown RBP5.56□□□□□ -1.52
RPB7YDR404C CMP2P14747 604 aa5.55□□□□□ -1.52
RPB7YDR404C APL1P27351 700 aa5.55□□□□□ -1.52
RPB7YDR404C RPN10P38886 268 aaKnown RBP5.55□□□□□ -1.52
RPB7YDR404C RPN11P43588 306 aaKnown RBP5.55□□□□□ -1.52
RPB7YDR404C ROT1Q03691 256 aa5.55□□□□□ -1.52
RPB7YDR404C NHX1Q04121 633 aa5.55□□□□□ -1.52
RPB7YDR404C YDR338CQ05497 695 aa5.55□□□□□ -1.52
RPB7YDR404C YTM1Q12024 460 aaPredicted RBP5.55□□□□□ -1.52
RPB7YDR404C NOT3P06102 836 aaKnown RBP5.54□□□□□ -1.52
RPB7YDR404C MIH1P23748 554 aa5.54□□□□□ -1.52
RPB7YDR404C URA1P28272 314 aaPredicted RBP5.54□□□□□ -1.52
RPB7YDR404C ABZ1P37254 787 aaPredicted RBP5.54□□□□□ -1.52
RPB7YDR404C PMC1P38929 1173 aaPredicted RBP5.54□□□□□ -1.52
RPB7YDR404C OAF1P39720 1047 aaPredicted RBP5.54□□□□□ -1.52
RPB7YDR404C PEX14P53112 341 aa5.54□□□□□ -1.52
RPB7YDR404C HDA1P53973 706 aa5.54□□□□□ -1.52
RPB7YDR404C BUD21Q08492 214 aaPredicted RBP5.54□□□□□ -1.52
RPB7YDR404C YOR378WQ08902 515 aa5.54□□□□□ -1.52
RPB7YDR404C YLR358CO13565 187 aa5.53□□□□□ -1.52
RPB7YDR404C YCR015CP25616 317 aa5.53□□□□□ -1.52
RPB7YDR404C PLC1P32383 869 aa5.53□□□□□ -1.52
RPB7YDR404C GIP4P39732 760 aa5.53□□□□□ -1.52
RPB7YDR404C RLP7P40693 322 aaKnown RBP5.53□□□□□ -1.52
RPB7YDR404C CEP3P40969 608 aa5.53□□□□□ -1.52
RPB7YDR404C GZF3P42944 551 aaKnown RBP5.53□□□□□ -1.52
RPB7YDR404C LYS4P49367 693 aaPredicted RBP5.53□□□□□ -1.52
RPB7YDR404C UBC9P50623 157 aaPredicted RBP5.53□□□□□ -1.52
RPB7YDR404C TGL2P54857 326 aa5.53□□□□□ -1.52
RPB7YDR404C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
RPB7YDR404C URB1P34241 1764 aaKnown RBP5.52□□□□□ -1.53
RPB7YDR404C DIF1O13577 133 aa5.52□□□□□ -1.53
RPB7YDR404C GAL10P04397 699 aa5.52□□□□□ -1.53
RPB7YDR404C CYS3P31373 394 aaKnown RBP5.52□□□□□ -1.53
RPB7YDR404C TFC4P33339 1025 aa5.52□□□□□ -1.53
RPB7YDR404C STE13P33894 931 aa5.52□□□□□ -1.53
RPB7YDR404C MEF2P39677 819 aa5.52□□□□□ -1.53
RPB7YDR404C DOT6P40059 670 aaKnown RBP5.52□□□□□ -1.53
RPB7YDR404C DUG1P43616 481 aaKnown RBP5.52□□□□□ -1.53
RPB7YDR404C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
RPB7YDR404C PBP1P53297 722 aaKnown RBP5.52□□□□□ -1.53
RPB7YDR404C GCN5Q03330 439 aa5.52□□□□□ -1.53
RPB7YDR404C YBR182C-AQ8TGU6 64 aa5.52□□□□□ -1.53
RPB7YDR404C RPS9AO13516 197 aaKnown RBP5.51□□□□□ -1.53
RPB7YDR404C CCR4P31384 837 aaKnown RBP5.51□□□□□ -1.53
RPB7YDR404C FLR1P38124 548 aa5.51□□□□□ -1.53
RPB7YDR404C HSL7P38274 827 aa5.51□□□□□ -1.53
RPB7YDR404C DAS1P47005 663 aa5.51□□□□□ -1.53
RPB7YDR404C YNL034WP53963 612 aa5.51□□□□□ -1.53
RPB7YDR404C YNL018CP53976 612 aa5.51□□□□□ -1.53
RPB7YDR404C YKR011CQ02209 353 aa5.51□□□□□ -1.53
RPB7YDR404C MPD2Q99316 277 aa5.51□□□□□ -1.53
RPB7YDR404C RPD3P32561 433 aa5.5□□□□□ -1.53
RPB7YDR404C SAP190P36123 1033 aa5.5□□□□□ -1.53
RPB7YDR404C SET5P38890 526 aaKnown RBP5.5□□□□□ -1.53
RPB7YDR404C MNN11P46985 422 aaKnown RBP5.5□□□□□ -1.53
RPB7YDR404C YGR153WP48238 217 aa5.5□□□□□ -1.53
RPB7YDR404C RAI1P53063 387 aaKnown RBP5.5□□□□□ -1.53
RPB7YDR404C VPS30Q02948 557 aa5.5□□□□□ -1.53
RPB7YDR404C RXT3Q07458 294 aa5.5□□□□□ -1.53
RPB7YDR404C RIB2Q12362 591 aaKnown RBP5.5□□□□□ -1.53
RPB7YDR404C NUP192P47054 1683 aa5.5□□□□□ -1.53
RPB7YDR404C FKS3Q04952 1785 aa5.5□□□□□ -1.53
RPB7YDR404C ATP4P05626 244 aa5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms