RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W SHR5P41912 237 aa3.7□□□□□ -1.82
SSF2YDR312W QRI1P43123 477 aaKnown RBP3.7□□□□□ -1.82
SSF2YDR312W STU2P46675 888 aa3.7□□□□□ -1.82
SSF2YDR312W DAS1P47005 663 aa3.7□□□□□ -1.82
SSF2YDR312W ALY2P47029 1046 aa3.7□□□□□ -1.82
SSF2YDR312W ZDS1P50111 915 aaKnown RBP3.7□□□□□ -1.82
SSF2YDR312W NRG1Q03125 231 aa3.7□□□□□ -1.82
SSF2YDR312W DIF1O13577 133 aa3.69□□□□□ -1.82
SSF2YDR312W SRD1P09007 221 aa3.69□□□□□ -1.82
SSF2YDR312W STO1P34160 861 aaKnown RBP3.69□□□□□ -1.82
SSF2YDR312W YHL017WP38745 532 aa3.69□□□□□ -1.82
SSF2YDR312W CAF16P43569 289 aa3.69□□□□□ -1.82
SSF2YDR312W YJL163CP46996 555 aa3.69□□□□□ -1.82
SSF2YDR312W ZIP2P53061 704 aa3.69□□□□□ -1.82
SSF2YDR312W YDR338CQ05497 695 aa3.69□□□□□ -1.82
SSF2YDR312W HBT1Q07653 1046 aaKnown RBP3.69□□□□□ -1.82
SSF2YDR312W IRC10Q08118 586 aa3.69□□□□□ -1.82
SSF2YDR312W GPR1Q12361 961 aa3.69□□□□□ -1.82
SSF2YDR312W MTH1P35198 433 aa3.68□□□□□ -1.82
SSF2YDR312W SIC1P38634 284 aa3.68□□□□□ -1.82
SSF2YDR312W MNN1P39106 762 aa3.68□□□□□ -1.82
SSF2YDR312W YIR042CP40586 236 aa3.68□□□□□ -1.82
SSF2YDR312W MTR3P48240 250 aaPredicted RBP3.68□□□□□ -1.82
SSF2YDR312W GND2P53319 492 aa3.68□□□□□ -1.82
SSF2YDR312W SNP1Q00916 300 aaPredicted RBP3.68□□□□□ -1.82
SSF2YDR312W CRR1Q05790 422 aa3.68□□□□□ -1.82
SSF2YDR312W TGL5Q12043 749 aa3.68□□□□□ -1.82
SSF2YDR312W RAD18P10862 487 aa3.67□□□□□ -1.82
SSF2YDR312W LAT1P12695 482 aaKnown RBP3.67□□□□□ -1.82
SSF2YDR312W YPT53P36019 220 aa3.67□□□□□ -1.82
SSF2YDR312W SDS3P40505 327 aa3.67□□□□□ -1.82
SSF2YDR312W TFB2Q02939 513 aa3.67□□□□□ -1.82
SSF2YDR312W ASM4Q05166 528 aa3.67□□□□□ -1.82
SSF2YDR312W YCF1P39109 1515 aaKnown RBP3.67□□□□□ -1.82
SSF2YDR312W MIH1P23748 554 aa3.66□□□□□ -1.82
SSF2YDR312W SPC42P36094 363 aa3.66□□□□□ -1.82
SSF2YDR312W YBR259WP38338 688 aa3.66□□□□□ -1.82
SSF2YDR312W IRC13Q08630 104 aa3.66□□□□□ -1.82
SSF2YDR312W NOP14Q99207 810 aaKnown RBP3.66□□□□□ -1.82
SSF2YDR312W LTE1P07866 1435 aa3.66□□□□□ -1.82
SSF2YDR312W RPL8AP17076 256 aaKnown RBP3.65□□□□□ -1.82
SSF2YDR312W PCL2P25693 308 aa3.65□□□□□ -1.82
SSF2YDR312W HOS4P40480 1083 aa3.65□□□□□ -1.82
SSF2YDR312W YNL193WP53870 558 aa3.65□□□□□ -1.82
SSF2YDR312W DNM1P54861 757 aa3.65□□□□□ -1.82
SSF2YDR312W YLR001CQ07895 862 aa3.65□□□□□ -1.82
SSF2YDR312W ATG11Q12527 1178 aa3.65□□□□□ -1.82
SSF2YDR312W Q0142Q9ZZW4 58 aa3.65□□□□□ -1.82
SSF2YDR312W XRN1P22147 1528 aaKnown RBP3.65□□□□□ -1.82
SSF2YDR312W HOG1P32485 435 aa3.64□□□□□ -1.83
SSF2YDR312W BCD1P38772 366 aa3.64□□□□□ -1.83
SSF2YDR312W PCL5P38794 229 aa3.64□□□□□ -1.83
SSF2YDR312W RPN10P38886 268 aaKnown RBP3.64□□□□□ -1.83
SSF2YDR312W ECM1P39715 212 aa3.64□□□□□ -1.83
SSF2YDR312W TEX1P53851 422 aaKnown RBP3.64□□□□□ -1.83
SSF2YDR312W RIA1P53893 1110 aa3.64□□□□□ -1.83
SSF2YDR312W YLR149CQ99296 730 aa3.64□□□□□ -1.83
SSF2YDR312W MET5P47169 1442 aa3.64□□□□□ -1.83
SSF2YDR312W SFL1P20134 766 aa3.63□□□□□ -1.83
SSF2YDR312W HIS7P33734 552 aaKnown RBP3.63□□□□□ -1.83
SSF2YDR312W YKR051WP36142 418 aa3.63□□□□□ -1.83
SSF2YDR312W BAP3P41815 604 aa3.63□□□□□ -1.83
SSF2YDR312W YFL052WP43551 465 aa3.63□□□□□ -1.83
SSF2YDR312W BNA2P47125 453 aa3.63□□□□□ -1.83
SSF2YDR312W UBC9P50623 157 aaPredicted RBP3.63□□□□□ -1.83
SSF2YDR312W UBC11P52492 156 aa3.63□□□□□ -1.83
SSF2YDR312W AIM14P53109 570 aa3.63□□□□□ -1.83
SSF2YDR312W MET13P53128 600 aa3.63□□□□□ -1.83
SSF2YDR312W NPY1P53164 384 aa3.63□□□□□ -1.83
SSF2YDR312W YBP2P53169 641 aa3.63□□□□□ -1.83
SSF2YDR312W NHX1Q04121 633 aa3.63□□□□□ -1.83
SSF2YDR312W ATG33Q06485 197 aa3.63□□□□□ -1.83
SSF2YDR312W SGO1Q08490 590 aa3.63□□□□□ -1.83
SSF2YDR312W MRH1Q12117 320 aaPredicted RBP3.63□□□□□ -1.83
SSF2YDR312W ADR1P07248 1323 aa3.63□□□□□ -1.83
SSF2YDR312W SKI3P17883 1432 aaKnown RBP3.63□□□□□ -1.83
SSF2YDR312W SFP1P32432 683 aa3.63□□□□□ -1.83
SSF2YDR312W YEL1P34225 687 aa3.63□□□□□ -1.83
SSF2YDR312W HSL7P38274 827 aa3.63□□□□□ -1.83
SSF2YDR312W PCM1P38628 557 aaKnown RBP3.63□□□□□ -1.83
SSF2YDR312W FMP52P40008 231 aa3.63□□□□□ -1.83
SSF2YDR312W YJR142WP47173 342 aa3.63□□□□□ -1.83
SSF2YDR312W PRP31P49704 494 aaPredicted RBP3.63□□□□□ -1.83
SSF2YDR312W YML122CQ03207 126 aa3.63□□□□□ -1.83
SSF2YDR312W UTP14Q04500 899 aaKnown RBP3.63□□□□□ -1.83
SSF2YDR312W GAD1Q04792 585 aa3.63□□□□□ -1.83
SSF2YDR312W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
SSF2YDR312W MMS1Q06211 1407 aa3.62□□□□□ -1.83
SSF2YDR312W HMG1P12683 1054 aa3.62□□□□□ -1.83
SSF2YDR312W TEL2P53038 688 aa3.62□□□□□ -1.83
SSF2YDR312W RPN7Q06103 429 aaKnown RBP3.62□□□□□ -1.83
SSF2YDR312W BNI1P41832 1953 aa3.62□□□□□ -1.83
SSF2YDR312W ATG2P53855 1592 aa3.61□□□□□ -1.83
SSF2YDR312W ADE2P21264 571 aaKnown RBP3.61□□□□□ -1.83
SSF2YDR312W HIR1P32479 840 aa3.61□□□□□ -1.83
SSF2YDR312W BRN1P38170 754 aa3.61□□□□□ -1.83
SSF2YDR312W FPR3P38911 411 aaKnown RBP3.61□□□□□ -1.83
SSF2YDR312W MGS1P40151 587 aa3.61□□□□□ -1.83
SSF2YDR312W ATF1P40353 525 aa3.61□□□□□ -1.83
SSF2YDR312W ORC4P54791 529 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms