RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W TMA10Q06177 86 aa3.23□□□□□ -1.89
VPS41YDR080W SRP101P32916 621 aa3.22□□□□□ -1.89
VPS41YDR080W SIT1P39980 628 aa3.22□□□□□ -1.89
VPS41YDR080W IRR1P40541 1150 aa3.22□□□□□ -1.89
VPS41YDR080W BUL1P48524 976 aa3.22□□□□□ -1.89
VPS41YDR080W PHO23P50947 330 aa3.22□□□□□ -1.89
VPS41YDR080W YGR012WP53206 393 aa3.22□□□□□ -1.89
VPS41YDR080W DUS3Q06053 668 aaKnown RBP3.22□□□□□ -1.89
VPS41YDR080W NOP12Q08208 459 aaKnown RBP3.22□□□□□ -1.89
VPS41YDR080W TY3A-GQ12173 290 aa3.22□□□□□ -1.89
VPS41YDR080W TY3A-IQ99219 290 aa3.22□□□□□ -1.89
VPS41YDR080W FLO11P08640 1367 aa3.22□□□□□ -1.89
VPS41YDR080W YBR238CP38330 731 aaKnown RBP3.22□□□□□ -1.89
VPS41YDR080W MAM1P40065 302 aa3.22□□□□□ -1.89
VPS41YDR080W URM1P40554 99 aaPredicted RBP3.22□□□□□ -1.89
VPS41YDR080W NET1P47035 1189 aa3.22□□□□□ -1.89
VPS41YDR080W RXT3Q07458 294 aa3.22□□□□□ -1.89
VPS41YDR080W ERG7P38604 731 aa3.21□□□□□ -1.89
VPS41YDR080W PLB1P39105 664 aa3.21□□□□□ -1.89
VPS41YDR080W SAH1P39954 449 aaKnown RBP3.21□□□□□ -1.89
VPS41YDR080W GYP7P48365 746 aa3.21□□□□□ -1.89
VPS41YDR080W PRP42Q03776 544 aaKnown RBP3.21□□□□□ -1.89
VPS41YDR080W KCS1Q12494 1050 aa3.21□□□□□ -1.89
VPS41YDR080W OSW2Q12202 724 aa3.21□□□□□ -1.9
VPS41YDR080W TUS1Q06412 1307 aa3.21□□□□□ -1.9
VPS41YDR080W HIS5P07172 385 aa3.21□□□□□ -1.9
VPS41YDR080W DCG1P32460 244 aa3.21□□□□□ -1.9
VPS41YDR080W PBY1P38254 753 aa3.21□□□□□ -1.9
VPS41YDR080W MPT5P39016 859 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
VPS41YDR080W EXG2P52911 562 aa3.21□□□□□ -1.9
VPS41YDR080W TDA5Q06417 326 aaKnown RBP3.21□□□□□ -1.9
VPS41YDR080W FMP25Q08023 583 aa3.21□□□□□ -1.9
VPS41YDR080W SPE1P08432 466 aa3.2□□□□□ -1.9
VPS41YDR080W RPL8BP29453 256 aaKnown RBP3.2□□□□□ -1.9
VPS41YDR080W STE14P32584 239 aa3.2□□□□□ -1.9
VPS41YDR080W MRP8P35719 219 aa3.2□□□□□ -1.9
VPS41YDR080W PSF2P40359 213 aa3.2□□□□□ -1.9
VPS41YDR080W YDR306CQ06640 478 aa3.2□□□□□ -1.9
VPS41YDR080W PPM2Q08282 695 aa3.2□□□□□ -1.9
VPS41YDR080W ICL2Q12031 575 aa3.2□□□□□ -1.9
VPS41YDR080W GIN4Q12263 1142 aa3.2□□□□□ -1.9
VPS41YDR080W TOP3P13099 656 aa3.2□□□□□ -1.9
VPS41YDR080W YMR084WA2P2R3 262 aa3.19□□□□□ -1.9
VPS41YDR080W PMA1P05030 918 aaKnown RBP3.19□□□□□ -1.9
VPS41YDR080W STE11P23561 717 aa3.19□□□□□ -1.9
VPS41YDR080W NUG1P40010 520 aaKnown RBP3.19□□□□□ -1.9
VPS41YDR080W SSL1Q04673 461 aaPredicted RBP3.19□□□□□ -1.9
VPS41YDR080W ENA1P13587 1091 aa3.19□□□□□ -1.9
VPS41YDR080W APL2P36000 726 aaPredicted RBP3.19□□□□□ -1.9
VPS41YDR080W MCM6P53091 1017 aaKnown RBP3.19□□□□□ -1.9
VPS41YDR080W PBP1P53297 722 aaKnown RBP3.19□□□□□ -1.9
VPS41YDR080W PAP2P53632 584 aaKnown RBP3.19□□□□□ -1.9
VPS41YDR080W DNM1P54861 757 aa3.19□□□□□ -1.9
VPS41YDR080W ENA2Q01896 1091 aa3.19□□□□□ -1.9
VPS41YDR080W UBX5Q06682 500 aa3.19□□□□□ -1.9
VPS41YDR080W ENA5Q12691 1091 aa3.19□□□□□ -1.9
VPS41YDR080W YKR078WP36158 585 aaKnown RBP3.18□□□□□ -1.9
VPS41YDR080W POA1P38218 177 aa3.18□□□□□ -1.9
VPS41YDR080W TOK1P40310 691 aa3.18□□□□□ -1.9
VPS41YDR080W UPC2Q12151 913 aa3.18□□□□□ -1.9
VPS41YDR080W NTO1Q12311 748 aa3.18□□□□□ -1.9
VPS41YDR080W SPL2P38839 148 aa3.18□□□□□ -1.9
VPS41YDR080W YER158CP40095 573 aa3.18□□□□□ -1.9
VPS41YDR080W UTP8P53276 713 aaKnown RBP3.18□□□□□ -1.9
VPS41YDR080W YOL057WQ08225 711 aa3.18□□□□□ -1.9
VPS41YDR080W WRS1Q12109 432 aaKnown RBP3.18□□□□□ -1.9
VPS41YDR080W HBN1Q96VH4 193 aa3.18□□□□□ -1.9
VPS41YDR080W CDC60P26637 1090 aaKnown RBP3.18□□□□□ -1.9
VPS41YDR080W RPD3P32561 433 aa3.18□□□□□ -1.9
VPS41YDR080W YBR284WP38150 797 aa3.18□□□□□ -1.9
VPS41YDR080W MNN10P50108 393 aaKnown RBP3.18□□□□□ -1.9
VPS41YDR080W RPT4P53549 437 aaKnown RBP3.18□□□□□ -1.9
VPS41YDR080W SRP1Q02821 542 aaKnown RBP3.18□□□□□ -1.9
VPS41YDR080W SWI1P09547 1314 aa3.18□□□□□ -1.9
VPS41YDR080W BET3P36149 193 aa3.17□□□□□ -1.9
VPS41YDR080W IOC3P43596 787 aa3.17□□□□□ -1.9
VPS41YDR080W SUN4P53616 420 aa3.17□□□□□ -1.9
VPS41YDR080W ERG5P54781 538 aa3.17□□□□□ -1.9
VPS41YDR080W PDS5Q04264 1277 aa3.17□□□□□ -1.9
VPS41YDR080W NPC2Q12408 173 aa3.17□□□□□ -1.9
VPS41YDR080W MGM1P32266 881 aa3.17□□□□□ -1.9
VPS41YDR080W YOR352WQ08816 343 aa3.17□□□□□ -1.9
VPS41YDR080W HSF1P10961 833 aa3.16□□□□□ -1.9
VPS41YDR080W MSD1P15179 658 aaKnown RBP3.16□□□□□ -1.9
VPS41YDR080W LCB1P25045 558 aaKnown RBP3.16□□□□□ -1.9
VPS41YDR080W CDC48P25694 835 aaKnown RBP3.16□□□□□ -1.9
VPS41YDR080W DEF1P35732 738 aaKnown RBP3.16□□□□□ -1.9
VPS41YDR080W OCT1P35999 772 aa3.16□□□□□ -1.9
VPS41YDR080W MSS4P38994 779 aa3.16□□□□□ -1.9
VPS41YDR080W ZDS1P50111 915 aaKnown RBP3.16□□□□□ -1.9
VPS41YDR080W HDA1P53973 706 aa3.16□□□□□ -1.9
VPS41YDR080W YPR071WQ12346 211 aa3.16□□□□□ -1.9
VPS41YDR080W MDM20Q12387 796 aaKnown RBP3.16□□□□□ -1.9
VPS41YDR080W PFK2P16862 959 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
VPS41YDR080W KAR4P25583 335 aa3.16□□□□□ -1.9
VPS41YDR080W SNF7P39929 240 aaKnown RBP3.16□□□□□ -1.9
VPS41YDR080W VAB2P40003 282 aa3.16□□□□□ -1.9
VPS41YDR080W LYS14P40971 790 aa3.16□□□□□ -1.9
VPS41YDR080W ALR2P43553 858 aa3.16□□□□□ -1.9
VPS41YDR080W TRM13Q12383 476 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms