RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C INA22P40576 216 aa2.24□□□□□ -2.05
BRE1YDL074C MMM1P41800 426 aa2.24□□□□□ -2.05
BRE1YDL074C UBP15P50101 1230 aa2.24□□□□□ -2.05
BRE1YDL074C YNL247WP53852 767 aaKnown RBP2.24□□□□□ -2.05
BRE1YDL074C MTG1Q03151 367 aaPredicted RBP2.24□□□□□ -2.05
BRE1YDL074C STE20Q03497 939 aaKnown RBP2.24□□□□□ -2.05
BRE1YDL074C YML020WQ03722 664 aa2.24□□□□□ -2.05
BRE1YDL074C SUE1Q06524 206 aa2.24□□□□□ -2.05
BRE1YDL074C VHS3Q08438 674 aa2.24□□□□□ -2.05
BRE1YDL074C CIR2Q08822 631 aa2.24□□□□□ -2.05
BRE1YDL074C TYW1Q08960 810 aaKnown RBP2.24□□□□□ -2.05
BRE1YDL074C YPL216WQ08964 1102 aa2.24□□□□□ -2.05
BRE1YDL074C AIM41Q12032 185 aa2.24□□□□□ -2.05
BRE1YDL074C YLL058WQ12198 575 aa2.24□□□□□ -2.05
BRE1YDL074C RMP1Q12530 201 aa2.24□□□□□ -2.05
BRE1YDL074C YLR462WO13556 202 aa2.24□□□□□ -2.05
BRE1YDL074C TRP2P00899 507 aaKnown RBP2.24□□□□□ -2.05
BRE1YDL074C SCP160P06105 1222 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05 RIP-Chip
BRE1YDL074C RAD1P06777 1100 aa2.24□□□□□ -2.05
BRE1YDL074C RNA1P11745 407 aaKnown RBP2.24□□□□□ -2.05
BRE1YDL074C COX11P19516 300 aaKnown RBP2.24□□□□□ -2.05
BRE1YDL074C MRPL25P23369 157 aa2.24□□□□□ -2.05
BRE1YDL074C MSH1P25846 959 aa2.24□□□□□ -2.05
BRE1YDL074C KIP2P28743 706 aa2.24□□□□□ -2.05
BRE1YDL074C SWI3P32591 825 aa2.24□□□□□ -2.05
BRE1YDL074C LAS1P36146 502 aaPredicted RBP2.24□□□□□ -2.05
BRE1YDL074C BSD2P38356 321 aa2.24□□□□□ -2.05
BRE1YDL074C TIF5P38431 405 aaKnown RBP2.24□□□□□ -2.05
BRE1YDL074C HIS2P38635 335 aa2.24□□□□□ -2.05
BRE1YDL074C YHL049CP38722 271 aa2.24□□□□□ -2.05
BRE1YDL074C RSC30P38781 883 aa2.24□□□□□ -2.05
BRE1YDL074C RIX1P38883 763 aaPredicted RBP2.24□□□□□ -2.05
BRE1YDL074C YEL075CP39972 122 aa2.24□□□□□ -2.05
BRE1YDL074C KAP123P40069 1113 aaKnown RBP2.24□□□□□ -2.05
BRE1YDL074C YER189WP40104 122 aa2.24□□□□□ -2.05
BRE1YDL074C AIM21P40563 679 aa2.24□□□□□ -2.05
BRE1YDL074C DSN1P40568 576 aa2.24□□□□□ -2.05
BRE1YDL074C YFL064CP43540 174 aa2.24□□□□□ -2.05
BRE1YDL074C MIC19P43594 170 aa2.24□□□□□ -2.05
BRE1YDL074C TRS85P46944 698 aa2.24□□□□□ -2.05
BRE1YDL074C HOP2P53187 214 aa2.24□□□□□ -2.05
BRE1YDL074C CUL3P53202 744 aa2.24□□□□□ -2.05
BRE1YDL074C YGR111WP53265 400 aa2.24□□□□□ -2.05
BRE1YDL074C YNL108CP53929 270 aa2.24□□□□□ -2.05
BRE1YDL074C UTP6Q02354 440 aaKnown RBP2.24□□□□□ -2.05
BRE1YDL074C SXM1Q04175 944 aaKnown RBP2.24□□□□□ -2.05
BRE1YDL074C TMA64Q04600 565 aaKnown RBP2.24□□□□□ -2.05
BRE1YDL074C UBX5Q06682 500 aa2.24□□□□□ -2.05
BRE1YDL074C YDL073WQ07454 984 aa2.24□□□□□ -2.05
BRE1YDL074C NOC3Q07896 663 aaPredicted RBP2.24□□□□□ -2.05
BRE1YDL074C CFT2Q12102 859 aaPredicted RBP2.24□□□□□ -2.05
BRE1YDL074C SGT2Q12118 346 aaKnown RBP2.24□□□□□ -2.05
BRE1YDL074C SPO21Q12411 609 aa2.24□□□□□ -2.05
BRE1YDL074C YBL111CQ3E7Y5 667 aa2.24□□□□□ -2.05
BRE1YDL074C YLR278CQ05854 1341 aa2.23□□□□□ -2.05
BRE1YDL074C THS1P04801 734 aaKnown RBP2.23□□□□□ -2.05
BRE1YDL074C YER152CP10356 443 aa2.23□□□□□ -2.05
BRE1YDL074C SAM1P10659 382 aaKnown RBP2.23□□□□□ -2.05
BRE1YDL074C TUP1P16649 713 aa2.23□□□□□ -2.05
BRE1YDL074C PRE10P21242 288 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
BRE1YDL074C TKL1P23254 680 aaKnown RBP2.23□□□□□ -2.05
BRE1YDL074C NAM7P30771 971 aaKnown RBP2.23□□□□□ -2.05
BRE1YDL074C ABD1P32783 436 aaPredicted RBP2.23□□□□□ -2.05
BRE1YDL074C LOS1P33418 1100 aaPredicted RBP2.23□□□□□ -2.05
BRE1YDL074C UBP11P36026 717 aa2.23□□□□□ -2.05
BRE1YDL074C CCL1P37366 393 aa2.23□□□□□ -2.05
BRE1YDL074C GUA1P38625 525 aaKnown RBP2.23□□□□□ -2.05
BRE1YDL074C MMS21P38632 267 aa2.23□□□□□ -2.05
BRE1YDL074C KIC1P38692 1080 aa2.23□□□□□ -2.05
BRE1YDL074C SET5P38890 526 aaKnown RBP2.23□□□□□ -2.05
BRE1YDL074C REV7P38927 245 aa2.23□□□□□ -2.05
BRE1YDL074C UBP5P39944 805 aa2.23□□□□□ -2.05
BRE1YDL074C EAF5P39995 279 aa2.23□□□□□ -2.05
BRE1YDL074C SAP185P40856 1058 aa2.23□□□□□ -2.05
BRE1YDL074C LCB2P40970 561 aa2.23□□□□□ -2.05
BRE1YDL074C CTK3P46963 296 aaPredicted RBP2.23□□□□□ -2.05
BRE1YDL074C HLJ1P48353 224 aa2.23□□□□□ -2.05
BRE1YDL074C PEX21P50091 288 aa2.23□□□□□ -2.05
BRE1YDL074C RTT102P53330 157 aa2.23□□□□□ -2.05
BRE1YDL074C DIP5P53388 608 aa2.23□□□□□ -2.05
BRE1YDL074C SHR3Q02774 210 aa2.23□□□□□ -2.05
BRE1YDL074C ROD1Q02805 837 aa2.23□□□□□ -2.05
BRE1YDL074C YMR187CQ03236 431 aa2.23□□□□□ -2.05
BRE1YDL074C URH1Q04179 340 aa2.23□□□□□ -2.05
BRE1YDL074C ECM7Q06200 448 aa2.23□□□□□ -2.05
BRE1YDL074C YDL057WQ07379 328 aa2.23□□□□□ -2.05
BRE1YDL074C IWR1Q07532 353 aaPredicted RBP2.23□□□□□ -2.05
BRE1YDL074C WHI4Q07655 649 aaKnown RBP2.23□□□□□ -2.05
BRE1YDL074C APC5Q08683 685 aa2.23□□□□□ -2.05
BRE1YDL074C CDC53Q12018 815 aaKnown RBP2.23□□□□□ -2.05
BRE1YDL074C TAF10Q12030 206 aa2.23□□□□□ -2.05
BRE1YDL074C GIS3Q12418 502 aa2.23□□□□□ -2.05
BRE1YDL074C YDL206WQ12424 762 aa2.23□□□□□ -2.05
BRE1YDL074C RIF1P29539 1916 aa2.23□□□□□ -2.05
BRE1YDL074C JIP3O13555 125 aa2.23□□□□□ -2.05
BRE1YDL074C PHR1P05066 565 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
BRE1YDL074C ADE3P07245 946 aaKnown RBP2.23□□□□□ -2.05
BRE1YDL074C TUB3P09734 445 aaKnown RBP2.23□□□□□ -2.05
BRE1YDL074C SSA1P10591 642 aaKnown RBP2.23□□□□□ -2.05
BRE1YDL074C SNA3P14359 133 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 93.7 ms