RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	BUD3	P25558	1636 aa		4.13	□□□□□ -1.75
CMD1	YBR109C	PDR12	Q02785	1511 aa		4.13	□□□□□ -1.75
CMD1	YBR109C	RPS9A	O13516	197 aa	Known RBP	4.13	□□□□□ -1.75
CMD1	YBR109C	SPE1	P08432	466 aa		4.13	□□□□□ -1.75
CMD1	YBR109C	SFL1	P20134	766 aa		4.13	□□□□□ -1.75
CMD1	YBR109C	CYS3	P31373	394 aa	Known RBP	4.13	□□□□□ -1.75
CMD1	YBR109C	ALY2	P47029	1046 aa		4.13	□□□□□ -1.75
CMD1	YBR109C	SDA1	P53313	767 aa	Known RBP	4.13	□□□□□ -1.75
CMD1	YBR109C	ROT1	Q03691	256 aa		4.13	□□□□□ -1.75
CMD1	YBR109C	SSL1	Q04673	461 aa	Predicted RBP	4.13	□□□□□ -1.75
CMD1	YBR109C	SGD1	Q06132	899 aa		4.13	□□□□□ -1.75
CMD1	YBR109C	ARO1	P08566	1588 aa	Known RBP	4.13	□□□□□ -1.75
CMD1	YBR109C	HOG1	P32485	435 aa		4.12	□□□□□ -1.75
CMD1	YBR109C	YIL108W	P40483	696 aa	Known RBP	4.12	□□□□□ -1.75
CMD1	YBR109C	PMT3	P47190	753 aa		4.12	□□□□□ -1.75
CMD1	YBR109C	PSP2	P50109	593 aa	Known RBP	4.12	□□□□□ -1.75
CMD1	YBR109C	GTF1	P53260	183 aa	Predicted RBP	4.12	□□□□□ -1.75
CMD1	YBR109C	SUN4	P53616	420 aa		4.12	□□□□□ -1.75
CMD1	YBR109C	UME1	Q03010	460 aa		4.12	□□□□□ -1.75
CMD1	YBR109C	YDR338C	Q05497	695 aa		4.12	□□□□□ -1.75
CMD1	YBR109C	ADY3	Q07732	790 aa		4.12	□□□□□ -1.75
CMD1	YBR109C	TPO1	Q07824	586 aa		4.12	□□□□□ -1.75
CMD1	YBR109C	YBR182C-A	Q8TGU6	64 aa		4.12	□□□□□ -1.75
CMD1	YBR109C	RPA190	P10964	1664 aa	Known RBP	4.11	□□□□□ -1.75
CMD1	YBR109C	DIF1	O13577	133 aa		4.11	□□□□□ -1.75
CMD1	YBR109C	FBP1	P09201	348 aa		4.11	□□□□□ -1.75
CMD1	YBR109C	SSB1	P11484	613 aa	Known RBP	4.11	□□□□□ -1.75
CMD1	YBR109C	HMG1	P12683	1054 aa		4.11	□□□□□ -1.75
CMD1	YBR109C	MIH1	P23748	554 aa		4.11	□□□□□ -1.75
CMD1	YBR109C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
CMD1	YBR109C	POA1	P38218	177 aa		4.11	□□□□□ -1.75
CMD1	YBR109C	PCM1	P38628	557 aa	Known RBP	4.11	□□□□□ -1.75
CMD1	YBR109C	LAM1	P38851	1228 aa		4.11	□□□□□ -1.75
CMD1	YBR109C	SET5	P38890	526 aa	Known RBP	4.11	□□□□□ -1.75
CMD1	YBR109C	SSB2	P40150	613 aa	Known RBP	4.11	□□□□□ -1.75
CMD1	YBR109C	RLP7	P40693	322 aa	Known RBP	4.11	□□□□□ -1.75
CMD1	YBR109C	YGR237C	P50089	785 aa		4.11	□□□□□ -1.75
CMD1	YBR109C	GPG1	P53130	126 aa		4.11	□□□□□ -1.75
CMD1	YBR109C	COG8	Q04632	607 aa		4.11	□□□□□ -1.75
CMD1	YBR109C	ATG33	Q06485	197 aa		4.11	□□□□□ -1.75
CMD1	YBR109C	WHI4	Q07655	649 aa	Known RBP	4.11	□□□□□ -1.75
CMD1	YBR109C	HAL9	Q12180	1030 aa		4.11	□□□□□ -1.75
CMD1	YBR109C	YOR022C	Q12204	715 aa		4.11	□□□□□ -1.75
CMD1	YBR109C	NUP145	P49687	1317 aa		4.11	□□□□□ -1.75
CMD1	YBR109C	NUP157	P40064	1391 aa	Known RBP	4.11	□□□□□ -1.75
CMD1	YBR109C	PRC1	P00729	532 aa		4.1	□□□□□ -1.75
CMD1	YBR109C	CDC6	P09119	513 aa		4.1	□□□□□ -1.75
CMD1	YBR109C	ATG19	P35193	415 aa		4.1	□□□□□ -1.75
CMD1	YBR109C	SAP190	P36123	1033 aa		4.1	□□□□□ -1.75
CMD1	YBR109C	TYS1	P36421	394 aa	Known RBP	4.1	□□□□□ -1.75
CMD1	YBR109C	RPN10	P38886	268 aa	Known RBP	4.1	□□□□□ -1.75
CMD1	YBR109C	GCV2	P49095	1034 aa		4.1	□□□□□ -1.75
CMD1	YBR109C	AIM14	P53109	570 aa		4.1	□□□□□ -1.75
CMD1	YBR109C	PUS2	P53167	370 aa		4.1	□□□□□ -1.75
CMD1	YBR109C	NHX1	Q04121	633 aa		4.1	□□□□□ -1.75
CMD1	YBR109C	DUS4	Q06063	367 aa		4.1	□□□□□ -1.75
CMD1	YBR109C	YOR352W	Q08816	343 aa		4.1	□□□□□ -1.75
CMD1	YBR109C	GDB1	Q06625	1536 aa		4.1	□□□□□ -1.75
CMD1	YBR109C	EMC1	P25574	760 aa		4.09	□□□□□ -1.75
CMD1	YBR109C	ESL2	P36168	1195 aa		4.09	□□□□□ -1.75
CMD1	YBR109C	MEF2	P39677	819 aa		4.09	□□□□□ -1.75
CMD1	YBR109C	SHR5	P41912	237 aa		4.09	□□□□□ -1.75
CMD1	YBR109C	MET12	P46151	657 aa		4.09	□□□□□ -1.75
CMD1	YBR109C	SPT20	P50875	604 aa		4.09	□□□□□ -1.75
CMD1	YBR109C	PBP1	P53297	722 aa	Known RBP	4.09	□□□□□ -1.75
CMD1	YBR109C	DUS1	P53759	423 aa	Known RBP	4.09	□□□□□ -1.75
CMD1	YBR109C	GCN5	Q03330	439 aa		4.09	□□□□□ -1.75
CMD1	YBR109C	MTQ2	Q03920	221 aa	Predicted RBP	4.09	□□□□□ -1.75
CMD1	YBR109C	GUD1	Q07729	489 aa		4.09	□□□□□ -1.75
CMD1	YBR109C	GUP2	Q08929	609 aa		4.09	□□□□□ -1.75
CMD1	YBR109C	THI21	Q08975	551 aa		4.09	□□□□□ -1.75
CMD1	YBR109C	HMI1	Q12039	706 aa		4.09	□□□□□ -1.75
CMD1	YBR109C	GIN4	Q12263	1142 aa		4.09	□□□□□ -1.75
CMD1	YBR109C	PRS1	P32895	427 aa	Known RBP	4.08	□□□□□ -1.76
CMD1	YBR109C	CTF8	P38877	133 aa		4.08	□□□□□ -1.76
CMD1	YBR109C	SDP1	P40479	209 aa		4.08	□□□□□ -1.76
CMD1	YBR109C	URM1	P40554	99 aa	Predicted RBP	4.08	□□□□□ -1.76
CMD1	YBR109C	GPP1	P41277	250 aa	Known RBP	4.08	□□□□□ -1.76
CMD1	YBR109C	YJR096W	P47137	282 aa		4.08	□□□□□ -1.76
CMD1	YBR109C	MET5	P47169	1442 aa		4.08	□□□□□ -1.76
CMD1	YBR109C	ZIP2	P53061	704 aa		4.08	□□□□□ -1.76
CMD1	YBR109C	VPS62	P53285	467 aa		4.08	□□□□□ -1.76
CMD1	YBR109C	CRR1	Q05790	422 aa		4.08	□□□□□ -1.76
CMD1	YBR109C	GPB1	Q08886	897 aa		4.08	□□□□□ -1.76
CMD1	YBR109C	FAP7	Q12055	197 aa	Predicted RBP	4.08	□□□□□ -1.76
CMD1	YBR109C	UPC2	Q12151	913 aa		4.08	□□□□□ -1.76
CMD1	YBR109C	YLR419W	Q06698	1435 aa	Known RBP	4.07	□□□□□ -1.76
CMD1	YBR109C	BNR1	P40450	1375 aa		4.07	□□□□□ -1.76
CMD1	YBR109C	RTC1	Q08281	1341 aa		4.07	□□□□□ -1.76
CMD1	YBR109C	RPP0	P05317	312 aa	Known RBP	4.07	□□□□□ -1.76
CMD1	YBR109C	HIS5	P07172	385 aa		4.07	□□□□□ -1.76
CMD1	YBR109C	CCR4	P31384	837 aa	Known RBP	4.07	□□□□□ -1.76
CMD1	YBR109C	STE14	P32584	239 aa		4.07	□□□□□ -1.76
CMD1	YBR109C	TOM20	P35180	183 aa		4.07	□□□□□ -1.76
CMD1	YBR109C	HSL7	P38274	827 aa		4.07	□□□□□ -1.76
CMD1	YBR109C	CHS7	P38843	316 aa		4.07	□□□□□ -1.76
CMD1	YBR109C	DOT6	P40059	670 aa	Known RBP	4.07	□□□□□ -1.76
CMD1	YBR109C	CHA4	P43634	648 aa		4.07	□□□□□ -1.76
CMD1	YBR109C	UBC9	P50623	157 aa	Predicted RBP	4.07	□□□□□ -1.76
CMD1	YBR109C	YRB30	P53107	440 aa	Predicted RBP	4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms