RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTG3	YBL103C	CIT2	P08679	460 aa		5.95	□□□□□ -1.46
RTG3	YBL103C	BCD1	P38772	366 aa		5.95	□□□□□ -1.46
RTG3	YBL103C	PCL5	P38794	229 aa		5.95	□□□□□ -1.46
RTG3	YBL103C	BNA2	P47125	453 aa		5.95	□□□□□ -1.46
RTG3	YBL103C	GAD1	Q04792	585 aa		5.95	□□□□□ -1.46
RTG3	YBL103C	GSY1	P23337	708 aa		5.94	□□□□□ -1.46
RTG3	YBL103C	THI4	P32318	326 aa		5.94	□□□□□ -1.46
RTG3	YBL103C	QRI1	P43123	477 aa	Known RBP	5.94	□□□□□ -1.46
RTG3	YBL103C	NPY1	P53164	384 aa		5.94	□□□□□ -1.46
RTG3	YBL103C	SNP1	Q00916	300 aa	Predicted RBP	5.94	□□□□□ -1.46
RTG3	YBL103C	ATG11	Q12527	1178 aa		5.93	□□□□□ -1.46
RTG3	YBL103C	ADE2	P21264	571 aa	Known RBP	5.92	□□□□□ -1.46
RTG3	YBL103C	MSH2	P25847	964 aa		5.92	□□□□□ -1.46
RTG3	YBL103C	UBC11	P52492	156 aa		5.92	□□□□□ -1.46
RTG3	YBL103C	RIA1	P53893	1110 aa		5.92	□□□□□ -1.46
RTG3	YBL103C	ORC4	P54791	529 aa		5.92	□□□□□ -1.46
RTG3	YBL103C	MRH1	Q12117	320 aa	Predicted RBP	5.92	□□□□□ -1.46
RTG3	YBL103C	MIH1	P23748	554 aa		5.91	□□□□□ -1.46
RTG3	YBL103C	YKR051W	P36142	418 aa		5.91	□□□□□ -1.46
RTG3	YBL103C	YHR112C	P38716	378 aa		5.91	□□□□□ -1.46
RTG3	YBL103C	FMP52	P40008	231 aa		5.91	□□□□□ -1.46
RTG3	YBL103C	SRD1	P09007	221 aa		5.9	□□□□□ -1.46
RTG3	YBL103C	ECM1	P39715	212 aa		5.9	□□□□□ -1.46
RTG3	YBL103C	BAP3	P41815	604 aa		5.9	□□□□□ -1.46
RTG3	YBL103C	MTL1	P53214	551 aa		5.9	□□□□□ -1.46
RTG3	YBL103C	SGO1	Q08490	590 aa		5.9	□□□□□ -1.46
RTG3	YBL103C	RAD18	P10862	487 aa		5.9	□□□□□ -1.47
RTG3	YBL103C	HIR1	P32479	840 aa		5.9	□□□□□ -1.47
RTG3	YBL103C	PEX6	P33760	1030 aa		5.9	□□□□□ -1.47
RTG3	YBL103C	MIP6	P38760	659 aa	Known RBP	5.9	□□□□□ -1.47
RTG3	YBL103C	NHX1	Q04121	633 aa		5.9	□□□□□ -1.47
RTG3	YBL103C	HOG1	P32485	435 aa		5.89	□□□□□ -1.47
RTG3	YBL103C	CBR1	P38626	284 aa	Known RBP	5.89	□□□□□ -1.47
RTG3	YBL103C	TEL2	P53038	688 aa		5.89	□□□□□ -1.47
RTG3	YBL103C	ARG5,6	Q01217	863 aa		5.89	□□□□□ -1.47
RTG3	YBL103C	UGO1	Q03327	502 aa		5.89	□□□□□ -1.47
RTG3	YBL103C	RPN7	Q06103	429 aa	Known RBP	5.89	□□□□□ -1.47
RTG3	YBL103C	ERG6	P25087	383 aa	Known RBP	5.88	□□□□□ -1.47
RTG3	YBL103C	APL2	P36000	726 aa	Predicted RBP	5.88	□□□□□ -1.47
RTG3	YBL103C	HSL7	P38274	827 aa		5.88	□□□□□ -1.47
RTG3	YBL103C	LYS9	P38999	446 aa		5.88	□□□□□ -1.47
RTG3	YBL103C	UBC9	P50623	157 aa	Predicted RBP	5.88	□□□□□ -1.47
RTG3	YBL103C	CTK1	Q03957	528 aa	Known RBP	5.88	□□□□□ -1.47
RTG3	YBL103C	REV7	P38927	245 aa		5.87	□□□□□ -1.47
RTG3	YBL103C	OSW7	P43611	510 aa		5.87	□□□□□ -1.47
RTG3	YBL103C	SSL2	Q00578	843 aa		5.87	□□□□□ -1.47
RTG3	YBL103C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.87	□□□□□ -1.47	not detected
RTG3	YBL103C	FMO1	P38866	432 aa		5.86	□□□□□ -1.47
RTG3	YBL103C	CCT3	P39077	534 aa	Known RBP	5.86	□□□□□ -1.47
RTG3	YBL103C	HRP1	Q99383	534 aa	Known RBP	5.86	□□□□□ -1.47
RTG3	YBL103C	YTA7	P40340	1379 aa		5.86	□□□□□ -1.47
RTG3	YBL103C	MVD1	P32377	396 aa	Known RBP	5.85	□□□□□ -1.47
RTG3	YBL103C	TRZ1	P36159	838 aa	Predicted RBP	5.85	□□□□□ -1.47
RTG3	YBL103C	APT2	P36973	181 aa		5.85	□□□□□ -1.47
RTG3	YBL103C	SFB3	P38810	929 aa		5.85	□□□□□ -1.47
RTG3	YBL103C	PAN2	P53010	1115 aa	Predicted RBP	5.85	□□□□□ -1.47
RTG3	YBL103C	RGC1	Q06108	1083 aa	Known RBP	5.85	□□□□□ -1.47
RTG3	YBL103C	MCM21	Q06675	368 aa		5.85	□□□□□ -1.47
RTG3	YBL103C	NTG2	Q08214	380 aa		5.85	□□□□□ -1.47
RTG3	YBL103C	SUT2	Q12286	268 aa		5.85	□□□□□ -1.47
RTG3	YBL103C	MET6	P05694	767 aa	Known RBP	5.84	□□□□□ -1.47
RTG3	YBL103C	KIN3	P22209	435 aa		5.84	□□□□□ -1.47
RTG3	YBL103C	YPT53	P36019	220 aa		5.84	□□□□□ -1.47
RTG3	YBL103C	YKR018C	P36114	725 aa		5.84	□□□□□ -1.47
RTG3	YBL103C	TDP1	P38319	544 aa		5.84	□□□□□ -1.47
RTG3	YBL103C	NUP60	P39705	539 aa		5.84	□□□□□ -1.47
RTG3	YBL103C	DOT6	P40059	670 aa	Known RBP	5.84	□□□□□ -1.47
RTG3	YBL103C	AIM14	P53109	570 aa		5.84	□□□□□ -1.47
RTG3	YBL103C	ARP4	P80428	489 aa		5.84	□□□□□ -1.47
RTG3	YBL103C	YKL033W-A	Q86ZR7	236 aa		5.84	□□□□□ -1.47
RTG3	YBL103C	PCL2	P25693	308 aa		5.83	□□□□□ -1.48
RTG3	YBL103C	PCL10	P53124	433 aa		5.83	□□□□□ -1.48
RTG3	YBL103C	SMX3	P54999	86 aa	Predicted RBP	5.83	□□□□□ -1.48
RTG3	YBL103C	LEE1	Q02799	301 aa	Known RBP	5.83	□□□□□ -1.48
RTG3	YBL103C	POB3	Q04636	552 aa	Known RBP	5.83	□□□□□ -1.48
RTG3	YBL103C	SIR3	P06701	978 aa		5.83	□□□□□ -1.48
RTG3	YBL103C	CDC43	P18898	376 aa		5.83	□□□□□ -1.48
RTG3	YBL103C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.83	□□□□□ -1.48	not detected
RTG3	YBL103C	YAP1802	P53309	568 aa		5.83	□□□□□ -1.48
RTG3	YBL103C	ATG33	Q06485	197 aa		5.83	□□□□□ -1.48
RTG3	YBL103C	HMG1	P12683	1054 aa		5.82	□□□□□ -1.48
RTG3	YBL103C	GET2	P40056	285 aa		5.82	□□□□□ -1.48
RTG3	YBL103C	VPS73	P53142	486 aa	Known RBP	5.82	□□□□□ -1.48
RTG3	YBL103C	YML122C	Q03207	126 aa		5.82	□□□□□ -1.48
RTG3	YBL103C	PYC1	P11154	1178 aa	Known RBP	5.81	□□□□□ -1.48
RTG3	YBL103C	GFA1	P14742	717 aa	Known RBP	5.81	□□□□□ -1.48
RTG3	YBL103C	RNR1	P21524	888 aa	Known RBP	5.81	□□□□□ -1.48
RTG3	YBL103C	REC102	Q02721	264 aa		5.81	□□□□□ -1.48
RTG3	YBL103C	SFL1	P20134	766 aa		5.8	□□□□□ -1.48
RTG3	YBL103C	MNN4	P36044	1178 aa		5.8	□□□□□ -1.48
RTG3	YBL103C	PCM1	P38628	557 aa	Known RBP	5.8	□□□□□ -1.48
RTG3	YBL103C	TAH11	P47112	604 aa		5.8	□□□□□ -1.48
RTG3	YBL103C	COX18	P53239	316 aa		5.8	□□□□□ -1.48
RTG3	YBL103C	HMO1	Q03973	246 aa	Known RBP	5.8	□□□□□ -1.48
RTG3	YBL103C	FPR4	Q06205	392 aa	Predicted RBP	5.8	□□□□□ -1.48
RTG3	YBL103C	PHO11	P35842	467 aa		5.79	□□□□□ -1.48
RTG3	YBL103C	PHO12	P38693	467 aa		5.79	□□□□□ -1.48
RTG3	YBL103C	GID8	P40208	455 aa		5.79	□□□□□ -1.48
RTG3	YBL103C	NDC80	P40460	691 aa		5.79	□□□□□ -1.48
RTG3	YBL103C	GIN4	Q12263	1142 aa		5.79	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms