RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 VPS53Q5VIR6 699 aa17.42■□□□□ 0.38
CHD1L-211ENST00000639534 SUSD4Q5VX71 490 aa17.42■□□□□ 0.38
CHD1L-211ENST00000639534 PRPF40BQ6NWY9 871 aaKnown RBP17.42■□□□□ 0.38
CHD1L-211ENST00000639534 TNPO1Q92973 898 aaKnown RBP17.42■□□□□ 0.38
CHD1L-211ENST00000639534 ZNF512BQ96KM6 892 aaPredicted RBP17.42■□□□□ 0.38
CHD1L-211ENST00000639534 ZSCAN31Q96LW9 406 aaPredicted RBP17.42■□□□□ 0.38
CHD1L-211ENST00000639534 FOXD4L1Q9NU39 408 aa17.42■□□□□ 0.38
CHD1L-211ENST00000639534 CYP46A1Q9Y6A2 500 aa17.42■□□□□ 0.38
CHD1L-211ENST00000639534 SSFA2P28290 1259 aa17.41■□□□□ 0.38
CHD1L-211ENST00000639534 GSE1Q14687 1217 aa17.41■□□□□ 0.38
CHD1L-211ENST00000639534 CCDC152Q4G0S7 254 aa17.41■□□□□ 0.38
CHD1L-211ENST00000639534 USPL1Q5W0Q7 1092 aa17.41■□□□□ 0.38
CHD1L-211ENST00000639534 CREB3L3Q68CJ9 461 aa17.41■□□□□ 0.38
CHD1L-211ENST00000639534 XAGE2Q96GT9 111 aa17.41■□□□□ 0.38
CHD1L-211ENST00000639534 GJD4Q96KN9 370 aaPredicted RBP17.41■□□□□ 0.38
CHD1L-211ENST00000639534 TTC14Q96N46 770 aa17.41■□□□□ 0.38
CHD1L-211ENST00000639534 ZSWIM6Q9HCJ5 1215 aa17.41■□□□□ 0.38
CHD1L-211ENST00000639534 ATRNO75882 1429 aa17.4■□□□□ 0.38
CHD1L-211ENST00000639534 TAF5LO75529 589 aa17.4■□□□□ 0.38
CHD1L-211ENST00000639534 SKOR2Q2VWA4 1001 aaPredicted RBP17.4■□□□□ 0.38
CHD1L-211ENST00000639534 DDX46Q7L014 1031 aaKnown RBP17.4■□□□□ 0.38
CHD1L-211ENST00000639534 RASEFQ8IZ41 740 aa17.4■□□□□ 0.38
CHD1L-211ENST00000639534 UPF3BQ9BZI7 483 aaKnown RBP17.4■□□□□ 0.38
CHD1L-211ENST00000639534 LIMCH1Q9UPQ0 1083 aa17.4■□□□□ 0.38
CHD1L-211ENST00000639534 NIP7Q9Y221 180 aaKnown RBP eCLIP17.4■□□□□ 0.38
CHD1L-211ENST00000639534 KAT6BQ8WYB5 2073 aa17.4■□□□□ 0.38
CHD1L-211ENST00000639534 SCN7AQ01118 1682 aa17.39■□□□□ 0.37
CHD1L-211ENST00000639534 GOLIM4O00461 696 aa17.39■□□□□ 0.37
CHD1L-211ENST00000639534 SLC27A2O14975 620 aa17.39■□□□□ 0.37
CHD1L-211ENST00000639534 ONECUT3O60422 494 aaPredicted RBP17.39■□□□□ 0.37
CHD1L-211ENST00000639534 NTSR2O95665 410 aa17.39■□□□□ 0.37
CHD1L-211ENST00000639534 CYP2E1P05181 493 aaPredicted RBP17.39■□□□□ 0.37
CHD1L-211ENST00000639534 UQCRFS1P1P0C7P4 283 aa17.39■□□□□ 0.37
CHD1L-211ENST00000639534 CASTP20810 708 aaKnown RBP17.39■□□□□ 0.37
CHD1L-211ENST00000639534 ANKRD1Q15327 319 aa17.39■□□□□ 0.37
CHD1L-211ENST00000639534 LINC00116Q8NCU8 138 aa17.39■□□□□ 0.37
CHD1L-211ENST00000639534 JAKMIP1Q96N16 626 aaKnown RBP17.39■□□□□ 0.37
CHD1L-211ENST00000639534 ALDH8A1Q9H2A2 487 aaPredicted RBP17.39■□□□□ 0.37
CHD1L-211ENST00000639534 TRPC5Q9UL62 973 aaPredicted RBP17.39■□□□□ 0.37
CHD1L-211ENST00000639534 RPAP1Q9BWH6 1393 aaPredicted RBP17.39■□□□□ 0.37
CHD1L-211ENST00000639534 RNF113AO15541 343 aaKnown RBP17.38■□□□□ 0.37
CHD1L-211ENST00000639534 PDE8BO95263 885 aa17.38■□□□□ 0.37
CHD1L-211ENST00000639534 HMGB2P26583 209 aaKnown RBP17.38■□□□□ 0.37
CHD1L-211ENST00000639534 TTF1Q15361 905 aaPredicted RBP17.38■□□□□ 0.37
CHD1L-211ENST00000639534 ZMYM1Q5SVZ6 1142 aa17.38■□□□□ 0.37
CHD1L-211ENST00000639534 ZSCAN25Q6NSZ9 544 aa17.38■□□□□ 0.37
CHD1L-211ENST00000639534 RUFY3Q7L099 469 aa17.38■□□□□ 0.37
CHD1L-211ENST00000639534 SYNE4Q8N205 404 aa17.38■□□□□ 0.37
CHD1L-211ENST00000639534 EDC3Q96F86 508 aaKnown RBP17.38■□□□□ 0.37
CHD1L-211ENST00000639534 CCDC85AQ96PX6 553 aaPredicted RBP17.38■□□□□ 0.37
CHD1L-211ENST00000639534 SH2B1Q9NRF2 756 aaPredicted RBP17.38■□□□□ 0.37
CHD1L-211ENST00000639534 PDRG1Q9NUG6 133 aa17.38■□□□□ 0.37
CHD1L-211ENST00000639534 AFF2P51816 1311 aa17.38■□□□□ 0.37
CHD1L-211ENST00000639534 BTAF1O14981 1849 aa17.37■□□□□ 0.37
CHD1L-211ENST00000639534 RPS6KA4O75676 772 aa17.37■□□□□ 0.37
CHD1L-211ENST00000639534 PUM3Q15397 648 aaKnown RBP17.37■□□□□ 0.37
CHD1L-211ENST00000639534 VGLL2Q8N8G2 317 aa17.37■□□□□ 0.37
CHD1L-211ENST00000639534 LPIN2Q92539 896 aa17.37■□□□□ 0.37
CHD1L-211ENST00000639534 DSCC1Q9BVC3 393 aa17.37■□□□□ 0.37
CHD1L-211ENST00000639534 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.37■□□□□ 0.37
CHD1L-211ENST00000639534 DDX60Q8IY21 1712 aaKnown RBP17.36■□□□□ 0.37
CHD1L-211ENST00000639534 ARAP2Q8WZ64 1704 aa17.36■□□□□ 0.37
CHD1L-211ENST00000639534 PDIA4P13667 645 aaKnown RBP17.36■□□□□ 0.37
CHD1L-211ENST00000639534 IGHMBP2P38935 993 aaKnown RBP17.36■□□□□ 0.37
CHD1L-211ENST00000639534 AK2P54819 239 aa17.36■□□□□ 0.37
CHD1L-211ENST00000639534 BLOC1S2Q6QNY1 142 aa17.36■□□□□ 0.37
CHD1L-211ENST00000639534 ZNF589Q86UQ0 364 aaPredicted RBP17.36■□□□□ 0.37
CHD1L-211ENST00000639534 MPHOSPH8Q99549 860 aa17.36■□□□□ 0.37
CHD1L-211ENST00000639534 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.36■□□□□ 0.378e-7■■□□□ 13
CHD1L-211ENST00000639534 NYXQ9GZU5 481 aa17.36■□□□□ 0.37
CHD1L-211ENST00000639534 MYH14Q7Z406 1995 aaKnown RBP17.36■□□□□ 0.37
CHD1L-211ENST00000639534 SLC5A1P13866 664 aa17.35■□□□□ 0.37
CHD1L-211ENST00000639534 HSPA1LP34931 641 aa17.35■□□□□ 0.37
CHD1L-211ENST00000639534 ZGPATQ8N5A5 531 aaKnown RBP17.35■□□□□ 0.37
CHD1L-211ENST00000639534 CDC5LQ99459 802 aaKnown RBP17.35■□□□□ 0.37
CHD1L-211ENST00000639534 NARFQ9UHQ1 456 aa17.35■□□□□ 0.37
CHD1L-211ENST00000639534 LY75O60449 1722 aa17.34■□□□□ 0.37
CHD1L-211ENST00000639534 HMGB1P09429 215 aaKnown RBP17.34■□□□□ 0.37
CHD1L-211ENST00000639534 HCLS1P14317 486 aaPredicted RBP17.34■□□□□ 0.37
CHD1L-211ENST00000639534 ADORA1P30542 326 aa17.34■□□□□ 0.37
CHD1L-211ENST00000639534 CCNL1Q9UK58 526 aaPredicted RBP17.34■□□□□ 0.37
CHD1L-211ENST00000639534 TRAK2O60296 914 aa17.33■□□□□ 0.36
CHD1L-211ENST00000639534 BAG4O95429 457 aaKnown RBP17.33■□□□□ 0.36
CHD1L-211ENST00000639534 FGFR2P21802 821 aa17.33■□□□□ 0.36
CHD1L-211ENST00000639534 ARID4AP29374 1257 aaPredicted RBP17.33■□□□□ 0.36
CHD1L-211ENST00000639534 FKBP4Q02790 459 aaKnown RBP eCLIP17.33■□□□□ 0.36
CHD1L-211ENST00000639534 SF3B3Q15393 1217 aaKnown RBP17.33■□□□□ 0.36
CHD1L-211ENST00000639534 SLC10A5Q5PT55 438 aa17.33■□□□□ 0.36
CHD1L-211ENST00000639534 CTNNA3Q9UI47 895 aa17.33■□□□□ 0.36
CHD1L-211ENST00000639534 RTCBQ9Y3I0 505 aaKnown RBP17.33■□□□□ 0.36
CHD1L-211ENST00000639534 RPS6KB1P23443 525 aa17.32■□□□□ 0.36
CHD1L-211ENST00000639534 ADCK5Q3MIX3 580 aa17.32■□□□□ 0.36
CHD1L-211ENST00000639534 APPBP2Q92624 585 aa17.32■□□□□ 0.36
CHD1L-211ENST00000639534 NDUFB9Q9Y6M9 179 aa17.32■□□□□ 0.36
CHD1L-211ENST00000639534 WDR33Q9C0J8 1336 aaKnown RBP17.31■□□□□ 0.36
CHD1L-211ENST00000639534 FAM177BA6PVY3 158 aa17.31■□□□□ 0.36
CHD1L-211ENST00000639534 ZPR1O75312 459 aa17.31■□□□□ 0.36
CHD1L-211ENST00000639534 NOL8Q76FK4 1167 aaKnown RBP17.31■□□□□ 0.36
CHD1L-211ENST00000639534 COL24A1Q17RW2 1714 aa17.3■□□□□ 0.36
CHD1L-211ENST00000639534 MAST3O60307 1309 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms