RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 E9PSI1 815 aa20.97■□□□□ 0.95
COLCA2-206ENST00000638573 H7C1W4 665 aa20.97■□□□□ 0.95
COLCA2-206ENST00000638573 PSMD14O00487 310 aa20.97■□□□□ 0.95
COLCA2-206ENST00000638573 ECE2O60344 883 aa20.97■□□□□ 0.95
COLCA2-206ENST00000638573 HIRAP54198 1017 aaPredicted RBP20.97■□□□□ 0.95
COLCA2-206ENST00000638573 CASP7P55210 303 aa20.97■□□□□ 0.95
COLCA2-206ENST00000638573 NEXNQ0ZGT2 675 aa20.97■□□□□ 0.95
COLCA2-206ENST00000638573 DLK2Q6UY11 383 aa20.97■□□□□ 0.95
COLCA2-206ENST00000638573 DNAAF4Q8WXU2 420 aa20.97■□□□□ 0.95
COLCA2-206ENST00000638573 EGFRP00533 1210 aa20.96■□□□□ 0.95
COLCA2-206ENST00000638573 GCKRQ14397 625 aa20.96■□□□□ 0.95
COLCA2-206ENST00000638573 ANKRD18AQ8IVF6 992 aa20.95■□□□□ 0.94
COLCA2-206ENST00000638573 BCL2L13Q9BXK5 485 aa20.95■□□□□ 0.94
COLCA2-206ENST00000638573 ANKIB1Q9P2G1 1089 aa20.95■□□□□ 0.94
COLCA2-206ENST00000638573 TMEM88BA6NKF7 163 aa20.94■□□□□ 0.94
COLCA2-206ENST00000638573 FAM161AQ3B820 660 aa20.94■□□□□ 0.94
COLCA2-206ENST00000638573 ADARB2Q9NS39 739 aaKnown RBP20.94■□□□□ 0.94
COLCA2-206ENST00000638573 HSPA1AP0DMV8 641 aaKnown RBP20.93■□□□□ 0.94
COLCA2-206ENST00000638573 HSPA1BP0DMV9 641 aaKnown RBP20.93■□□□□ 0.94
COLCA2-206ENST00000638573 USP50Q70EL3 339 aaPredicted RBP20.93■□□□□ 0.94
COLCA2-206ENST00000638573 SAMD7Q7Z3H4 446 aa20.93■□□□□ 0.94
COLCA2-206ENST00000638573 MICALL2Q8IY33 904 aa20.93■□□□□ 0.94
COLCA2-206ENST00000638573 GLIS2Q9BZE0 524 aaPredicted RBP20.93■□□□□ 0.94
COLCA2-206ENST00000638573 PODXL2Q9NZ53 605 aa20.93■□□□□ 0.94
COLCA2-206ENST00000638573 CNOT7Q9UIV1 285 aaKnown RBP20.93■□□□□ 0.94
COLCA2-206ENST00000638573 GGA1Q9UJY5 639 aa20.93■□□□□ 0.94
COLCA2-206ENST00000638573 CNTNAP1P78357 1384 aa20.93■□□□□ 0.94
COLCA2-206ENST00000638573 VEGFBP49765 207 aa20.92■□□□□ 0.94
COLCA2-206ENST00000638573 TNIP1Q15025 636 aa20.92■□□□□ 0.94
COLCA2-206ENST00000638573 COL13A1Q5TAT6 717 aaPredicted RBP20.92■□□□□ 0.94
COLCA2-206ENST00000638573 LINS1Q8NG48 757 aa20.92■□□□□ 0.94
COLCA2-206ENST00000638573 KLRK1P26718 216 aa20.91■□□□□ 0.94
COLCA2-206ENST00000638573 SLFN5Q08AF3 891 aa20.91■□□□□ 0.94
COLCA2-206ENST00000638573 BEND3Q5T5X7 828 aa20.91■□□□□ 0.94
COLCA2-206ENST00000638573 MINPP1Q9UNW1 487 aa20.91■□□□□ 0.94
COLCA2-206ENST00000638573 HSP90B1P14625 803 aaKnown RBP20.9■□□□□ 0.94
COLCA2-206ENST00000638573 TBC1D10BQ4KMP7 808 aaPredicted RBP20.9■□□□□ 0.94
COLCA2-206ENST00000638573 EPHA10Q5JZY3 1008 aa20.9■□□□□ 0.94
COLCA2-206ENST00000638573 CST9Q5W186 159 aa20.9■□□□□ 0.94
COLCA2-206ENST00000638573 EYA3Q99504 573 aa20.9■□□□□ 0.94
COLCA2-206ENST00000638573 ZC3H12CQ9C0D7 883 aaKnown RBP20.9■□□□□ 0.94
COLCA2-206ENST00000638573 ASTN2O75129 1339 aaPredicted RBP20.89■□□□□ 0.93
COLCA2-206ENST00000638573 XDHP47989 1333 aa20.89■□□□□ 0.93
COLCA2-206ENST00000638573 SCN9AQ15858 1988 aa20.89■□□□□ 0.93
COLCA2-206ENST00000638573 SNAP23O00161 211 aa20.89■□□□□ 0.93
COLCA2-206ENST00000638573 ITGA6P23229 1130 aa20.89■□□□□ 0.93
COLCA2-206ENST00000638573 RBM26Q5T8P6 1007 aaKnown RBP20.89■□□□□ 0.93
COLCA2-206ENST00000638573 TXNRD3Q86VQ6 643 aa20.89■□□□□ 0.93
COLCA2-206ENST00000638573 CDCA7LQ96GN5 454 aa20.89■□□□□ 0.93
COLCA2-206ENST00000638573 CDC5LQ99459 802 aaKnown RBP20.89■□□□□ 0.93
COLCA2-206ENST00000638573 SPEF2Q9C093 1822 aa20.88■□□□□ 0.93
COLCA2-206ENST00000638573 MXD3Q9BW11 206 aa20.88■□□□□ 0.93
COLCA2-206ENST00000638573 PLA2G12BQ9BX93 195 aa20.88■□□□□ 0.93
COLCA2-206ENST00000638573 ABT1Q9ULW3 272 aaKnown RBP20.88■□□□□ 0.93
COLCA2-206ENST00000638573 FOXO4P98177 505 aa20.87■□□□□ 0.93
COLCA2-206ENST00000638573 BSDC1Q9NW68 430 aaPredicted RBP20.87■□□□□ 0.93
COLCA2-206ENST00000638573 ZBED9Q6R2W3 1325 aa20.86■□□□□ 0.93
COLCA2-206ENST00000638573 CSF1RP07333 972 aa20.86■□□□□ 0.93
COLCA2-206ENST00000638573 SLC4A10Q6U841 1118 aa20.86■□□□□ 0.93
COLCA2-206ENST00000638573 CACNA1FO60840 1977 aa20.85■□□□□ 0.93
COLCA2-206ENST00000638573 G3V3G9 751 aa20.85■□□□□ 0.93
COLCA2-206ENST00000638573 VIL1P09327 827 aaKnown RBP20.85■□□□□ 0.93
COLCA2-206ENST00000638573 ATP2B4P23634 1241 aa20.85■□□□□ 0.93
COLCA2-206ENST00000638573 GRM1Q13255 1194 aa20.85■□□□□ 0.93
COLCA2-206ENST00000638573 DCAF8Q5TAQ9 597 aa20.85■□□□□ 0.93
COLCA2-206ENST00000638573 IFFO2Q5TF58 517 aa20.85■□□□□ 0.93
COLCA2-206ENST00000638573 HELBQ8NG08 1087 aaPredicted RBP20.85■□□□□ 0.93
COLCA2-206ENST00000638573 ZNF408Q9H9D4 720 aa20.85■□□□□ 0.93
COLCA2-206ENST00000638573 PGAP2Q9UHJ9 254 aa20.85■□□□□ 0.93
COLCA2-206ENST00000638573 PCNTO95613 3336 aa20.85■□□□□ 0.93
COLCA2-206ENST00000638573 RASSF10A6NK89 507 aa20.84■□□□□ 0.93
COLCA2-206ENST00000638573 H7C1D1 291 aa20.84■□□□□ 0.93
COLCA2-206ENST00000638573 CCT4P50991 539 aaKnown RBP20.84■□□□□ 0.93
COLCA2-206ENST00000638573 USP48Q86UV5 1035 aa20.84■□□□□ 0.93
COLCA2-206ENST00000638573 DPF2Q92785 391 aa20.84■□□□□ 0.93
COLCA2-206ENST00000638573 ZNF594Q96JF6 807 aaPredicted RBP20.84■□□□□ 0.93
COLCA2-206ENST00000638573 CHMP3Q9Y3E7 222 aa20.84■□□□□ 0.93
COLCA2-206ENST00000638573 ADM5C9JUS6 153 aa20.83■□□□□ 0.93
COLCA2-206ENST00000638573 FOXN1O15353 648 aa20.83■□□□□ 0.93
COLCA2-206ENST00000638573 CELF2O95319 508 aaKnown RBP20.83■□□□□ 0.93
COLCA2-206ENST00000638573 DEFB115Q30KQ5 88 aa20.83■□□□□ 0.93
COLCA2-206ENST00000638573 CYP4F22Q6NT55 531 aa20.83■□□□□ 0.93
COLCA2-206ENST00000638573 MRPL50Q8N5N7 158 aaKnown RBP20.83■□□□□ 0.93
COLCA2-206ENST00000638573 SCAF8Q9UPN6 1271 aaKnown RBP20.83■□□□□ 0.93
COLCA2-206ENST00000638573 TAF5LO75529 589 aa20.82■□□□□ 0.92
COLCA2-206ENST00000638573 IGHMBP2P38935 993 aaKnown RBP20.82■□□□□ 0.92
COLCA2-206ENST00000638573 LMBR1LQ6UX01 489 aa20.82■□□□□ 0.92
COLCA2-206ENST00000638573 PAXIP1Q6ZW49 1069 aaPredicted RBP20.82■□□□□ 0.92
COLCA2-206ENST00000638573 TRMT2AQ8IZ69 625 aaKnown RBP20.82■□□□□ 0.92
COLCA2-206ENST00000638573 MYH3P11055 1940 aa20.81■□□□□ 0.92
COLCA2-206ENST00000638573 GRM8O00222 908 aa20.81■□□□□ 0.92
COLCA2-206ENST00000638573 CHRNDQ07001 517 aa20.81■□□□□ 0.92
COLCA2-206ENST00000638573 KIF4BQ2VIQ3 1234 aa20.81■□□□□ 0.92
COLCA2-206ENST00000638573 RSBN1LQ6PCB5 846 aaPredicted RBP20.81■□□□□ 0.92
COLCA2-206ENST00000638573 SSH1Q8WYL5 1049 aa20.81■□□□□ 0.92
COLCA2-206ENST00000638573 KAZALD1Q96I82 304 aa20.81■□□□□ 0.92
COLCA2-206ENST00000638573 SUCLG2Q96I99 432 aa20.81■□□□□ 0.92
COLCA2-206ENST00000638573 MED23Q9ULK4 1368 aa20.81■□□□□ 0.92
COLCA2-206ENST00000638573 FBXW7Q969H0 707 aa20.8■□□□□ 0.92
COLCA2-206ENST00000638573 GMLQ99445 158 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms