RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 DYNC1I1O14576 645 aa18.55■□□□□ 0.56
CACNA1A-258ENST00000638029 SF3A3Q12874 501 aaKnown RBP eCLIP18.55■□□□□ 0.56
CACNA1A-258ENST00000638029 CACYBPQ9HB71 228 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-258ENST00000638029 SLC52A1Q9NWF4 448 aa18.55■□□□□ 0.56
CACNA1A-258ENST00000638029 MICU3Q86XE3 530 aa18.55■□□□□ 0.56
CACNA1A-258ENST00000638029 CEP120Q8N960 986 aa18.55■□□□□ 0.56
CACNA1A-258ENST00000638029 ANO10Q9NW15 660 aa18.55■□□□□ 0.56
CACNA1A-258ENST00000638029 TFCP2L1Q9NZI6 479 aa18.55■□□□□ 0.56
CACNA1A-258ENST00000638029 AFG3L2Q9Y4W6 797 aa18.54■□□□□ 0.56
CACNA1A-258ENST00000638029 KIFC2Q96AC6 838 aa18.54■□□□□ 0.56
CACNA1A-258ENST00000638029 EHBP1L1Q8N3D4 1523 aa18.54■□□□□ 0.56
CACNA1A-258ENST00000638029 MCM10Q7L590 875 aa18.54■□□□□ 0.56
CACNA1A-258ENST00000638029 SEPT10Q9P0V9 454 aa18.54■□□□□ 0.56
CACNA1A-258ENST00000638029 ATP5J2-PTCD1G3V325 749 aa18.54■□□□□ 0.56
CACNA1A-258ENST00000638029 BACH1O14867 736 aa18.54■□□□□ 0.56
CACNA1A-258ENST00000638029 SETDB2Q96T68 719 aa18.54■□□□□ 0.56
CACNA1A-258ENST00000638029 PLEKHH2Q8IVE3 1493 aa18.54■□□□□ 0.56
CACNA1A-258ENST00000638029 XRCC6P12956 609 aaKnown RBP eCLIP18.54■□□□□ 0.56
CACNA1A-258ENST00000638029 ACRBPQ8NEB7 543 aa18.54■□□□□ 0.56
CACNA1A-258ENST00000638029 SPDYE16A6NNV3 312 aaPredicted RBP18.54■□□□□ 0.56
CACNA1A-258ENST00000638029 DAPK3O43293 454 aa18.54■□□□□ 0.56
CACNA1A-258ENST00000638029 SPDYE2Q495Y8 402 aa18.54■□□□□ 0.56
CACNA1A-258ENST00000638029 ZSCAN30Q86W11 494 aa18.54■□□□□ 0.56
CACNA1A-258ENST00000638029 TMEM57Q8N5G2 664 aa18.54■□□□□ 0.56
CACNA1A-258ENST00000638029 RSPH14Q9UHP6 348 aa18.54■□□□□ 0.56
CACNA1A-258ENST00000638029 AK9Q5TCS8 1911 aa18.54■□□□□ 0.56
CACNA1A-258ENST00000638029 CFTRP13569 1480 aa18.54■□□□□ 0.56
CACNA1A-258ENST00000638029 KRT5P13647 590 aa18.53■□□□□ 0.56
CACNA1A-258ENST00000638029 NFE2L2Q16236 605 aa18.53■□□□□ 0.56
CACNA1A-258ENST00000638029 CPSF2Q9P2I0 782 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-258ENST00000638029 SLC26A6Q9BXS9 759 aa18.53■□□□□ 0.56
CACNA1A-258ENST00000638029 HMGB1P09429 215 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-258ENST00000638029 RPGRIP1LQ68CZ1 1315 aa18.53■□□□□ 0.56
CACNA1A-258ENST00000638029 KIF3CO14782 793 aa18.53■□□□□ 0.56
CACNA1A-258ENST00000638029 JDP2Q8WYK2 163 aa18.53■□□□□ 0.56
CACNA1A-258ENST00000638029 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.53■□□□□ 0.56
CACNA1A-258ENST00000638029 V9GYY5 206 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-258ENST00000638029 ANKRD30BQ9BXX2 1392 aa18.53■□□□□ 0.56
CACNA1A-258ENST00000638029 CKAP4Q07065 602 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-258ENST00000638029 GBP7Q8N8V2 638 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-258ENST00000638029 FAM200AQ8TCP9 573 aa18.53■□□□□ 0.56
CACNA1A-258ENST00000638029 CAPZA3Q96KX2 299 aa18.53■□□□□ 0.56
CACNA1A-258ENST00000638029 SEC62Q99442 399 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-258ENST00000638029 NSD3Q9BZ95 1437 aa18.53■□□□□ 0.56
CACNA1A-258ENST00000638029 PPFIA1Q13136 1202 aa18.52■□□□□ 0.56
CACNA1A-258ENST00000638029 RFC1P35251 1148 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-258ENST00000638029 SPATA17Q96L03 361 aa18.52■□□□□ 0.56
CACNA1A-258ENST00000638029 AGTPBP1Q9UPW5 1226 aa18.52■□□□□ 0.56
CACNA1A-258ENST00000638029 FCHSD2O94868 740 aa18.52■□□□□ 0.55
CACNA1A-258ENST00000638029 UBA7P41226 1012 aa18.52■□□□□ 0.55
CACNA1A-258ENST00000638029 RNF41Q9H4P4 317 aaPredicted RBP18.52■□□□□ 0.55
CACNA1A-258ENST00000638029 HFM1A2PYH4 1435 aa18.52■□□□□ 0.55
CACNA1A-258ENST00000638029 GDPD2Q9HCC8 539 aa18.52■□□□□ 0.55
CACNA1A-258ENST00000638029 TFIP11Q9UBB9 837 aaKnown RBP18.52■□□□□ 0.55
CACNA1A-258ENST00000638029 TMPOP42166 694 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-258ENST00000638029 ATRIPQ8WXE1 791 aa18.51■□□□□ 0.55
CACNA1A-258ENST00000638029 CCDC14Q49A88 953 aa18.51■□□□□ 0.55
CACNA1A-258ENST00000638029 PRG4Q92954 1404 aaPredicted RBP18.51■□□□□ 0.55
CACNA1A-258ENST00000638029 ATAD2Q6PL18 1390 aa18.51■□□□□ 0.55
CACNA1A-258ENST00000638029 GOLIM4O00461 696 aa18.51■□□□□ 0.55
CACNA1A-258ENST00000638029 RAB3GAP1Q15042 981 aa18.51■□□□□ 0.55
CACNA1A-258ENST00000638029 ATP6V1AP38606 617 aa18.51■□□□□ 0.55
CACNA1A-258ENST00000638029 TTC31Q49AM3 519 aaPredicted RBP18.51■□□□□ 0.55
CACNA1A-258ENST00000638029 NUDT16Q96DE0 195 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-258ENST00000638029 CDC5LQ99459 802 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-258ENST00000638029 HSPA1LP34931 641 aa18.51■□□□□ 0.55
CACNA1A-258ENST00000638029 CCDC183Q5T5S1 534 aa18.51■□□□□ 0.55
CACNA1A-258ENST00000638029 SMARCC2Q8TAQ2 1214 aa18.51■□□□□ 0.55
CACNA1A-258ENST00000638029 CASKIN1Q8WXD9 1431 aa18.5■□□□□ 0.55
CACNA1A-258ENST00000638029 CNGA1P29973 690 aa18.5■□□□□ 0.55
CACNA1A-258ENST00000638029 FNBP4Q8N3X1 1017 aaPredicted RBP18.5■□□□□ 0.55
CACNA1A-258ENST00000638029 FSIP1Q8NA03 581 aa18.5■□□□□ 0.55
CACNA1A-258ENST00000638029 CCDC12Q8WUD4 166 aaPredicted RBP18.5■□□□□ 0.55
CACNA1A-258ENST00000638029 TRIM47Q96LD4 638 aa18.5■□□□□ 0.55
CACNA1A-258ENST00000638029 E7EVH7 732 aa18.5■□□□□ 0.55
CACNA1A-258ENST00000638029 MX1P20591 662 aa18.5■□□□□ 0.55
CACNA1A-258ENST00000638029 MFSD6Q6ZSS7 791 aa18.5■□□□□ 0.55
CACNA1A-258ENST00000638029 TBC1D31Q96DN5 1066 aa18.5■□□□□ 0.55
CACNA1A-258ENST00000638029 FOXO3O43524 673 aa18.5■□□□□ 0.55
CACNA1A-258ENST00000638029 TSTA3Q13630 321 aaPredicted RBP18.5■□□□□ 0.55
CACNA1A-258ENST00000638029 TAF7Q15545 349 aaPredicted RBP18.5■□□□□ 0.55
CACNA1A-258ENST00000638029 TTC12Q9H892 705 aaPredicted RBP18.5■□□□□ 0.55
CACNA1A-258ENST00000638029 FRMD4BQ9Y2L6 1034 aa18.5■□□□□ 0.55
CACNA1A-258ENST00000638029 TACC3Q9Y6A5 838 aa18.5■□□□□ 0.55
CACNA1A-258ENST00000638029 ZYXQ15942 572 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-258ENST00000638029 UBE2Q2Q8WVN8 375 aa18.49■□□□□ 0.55
CACNA1A-258ENST00000638029 IFIT1BQ5T764 474 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-258ENST00000638029 MIPOL1Q8TD10 442 aa18.49■□□□□ 0.55
CACNA1A-258ENST00000638029 TRIM7Q9C029 511 aa18.49■□□□□ 0.55
CACNA1A-258ENST00000638029 GRIN2BQ13224 1484 aa18.49■□□□□ 0.55
CACNA1A-258ENST00000638029 FAM135AQ9P2D6 1515 aa18.49■□□□□ 0.55
CACNA1A-258ENST00000638029 MAEAQ7L5Y9 396 aa18.49■□□□□ 0.55
CACNA1A-258ENST00000638029 PARP3Q9Y6F1 533 aa18.49■□□□□ 0.55
CACNA1A-258ENST00000638029 UIMC1Q96RL1 719 aa18.49■□□□□ 0.55
CACNA1A-258ENST00000638029 RPAP2Q8IXW5 612 aaPredicted RBP18.48■□□□□ 0.55
CACNA1A-258ENST00000638029 VPS52Q8N1B4 723 aa18.48■□□□□ 0.55
CACNA1A-258ENST00000638029 FAM114A2Q9NRY5 505 aa18.48■□□□□ 0.55
CACNA1A-258ENST00000638029 KIAA1107Q9UPP5 1409 aa18.48■□□□□ 0.55
CACNA1A-258ENST00000638029 STAT6P42226 847 aa18.48■□□□□ 0.55
CACNA1A-258ENST00000638029 KIF2AO00139 706 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms