RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 DRC3Q9H069 523 aa17.07■□□□□ 0.32
UBE3A-227ENST00000638011 SYNCQ9H7C4 482 aa17.07■□□□□ 0.32
UBE3A-227ENST00000638011 HCLS1P14317 486 aaPredicted RBP17.07■□□□□ 0.32
UBE3A-227ENST00000638011 PFDN1O60925 122 aa17.06■□□□□ 0.32
UBE3A-227ENST00000638011 FHOD3Q2V2M9 1422 aa17.06■□□□□ 0.32
UBE3A-227ENST00000638011 CEP104O60308 925 aa17.06■□□□□ 0.32
UBE3A-227ENST00000638011 BICD1Q96G01 975 aa17.06■□□□□ 0.32
UBE3A-227ENST00000638011 CCDC42Q96M95 316 aa17.06■□□□□ 0.32
UBE3A-227ENST00000638011 TBC1D32Q96NH3 1257 aa17.06■□□□□ 0.32
UBE3A-227ENST00000638011 HMOX1P09601 288 aa17.06■□□□□ 0.32
UBE3A-227ENST00000638011 NAPBQ9H115 298 aa17.06■□□□□ 0.32
UBE3A-227ENST00000638011 LRPPRCP42704 1394 aaKnown RBP17.06■□□□□ 0.32
UBE3A-227ENST00000638011 I3L4J1 428 aa17.06■□□□□ 0.32
UBE3A-227ENST00000638011 NBPF7P0C2Y1 421 aaPredicted RBP17.06■□□□□ 0.32
UBE3A-227ENST00000638011 SRGAP1Q7Z6B7 1085 aa17.06■□□□□ 0.32
UBE3A-227ENST00000638011 MUM1Q2TAK8 710 aa17.05■□□□□ 0.32
UBE3A-227ENST00000638011 MYRIPQ8NFW9 859 aa17.05■□□□□ 0.32
UBE3A-227ENST00000638011 MICAL1Q8TDZ2 1067 aa17.05■□□□□ 0.32
UBE3A-227ENST00000638011 SLMAPQ14BN4 828 aa17.05■□□□□ 0.32
UBE3A-227ENST00000638011 ANO6Q4KMQ2 910 aa17.05■□□□□ 0.32
UBE3A-227ENST00000638011 EHBP1L1Q8N3D4 1523 aa17.05■□□□□ 0.32
UBE3A-227ENST00000638011 INF2Q27J81 1249 aa17.05■□□□□ 0.32
UBE3A-227ENST00000638011 IMPACTQ9P2X3 320 aa17.05■□□□□ 0.32
UBE3A-227ENST00000638011 PDE1CQ14123 709 aaPredicted RBP17.05■□□□□ 0.32
UBE3A-227ENST00000638011 SLF2Q8IX21 1173 aa17.05■□□□□ 0.32
UBE3A-227ENST00000638011 AMOTQ4VCS5 1084 aa17.05■□□□□ 0.32
UBE3A-227ENST00000638011 MINK1Q8N4C8 1332 aaPredicted RBP17.05■□□□□ 0.32
UBE3A-227ENST00000638011 GOLGA8BA8MQT2 603 aa17.04■□□□□ 0.32
UBE3A-227ENST00000638011 PPP2R1AP30153 589 aa17.04■□□□□ 0.32
UBE3A-227ENST00000638011 ZSWIM4Q9H7M6 989 aa17.04■□□□□ 0.32
UBE3A-227ENST00000638011 MED4Q9NPJ6 270 aa17.04■□□□□ 0.32
UBE3A-227ENST00000638011 TSKSQ9UJT2 592 aa17.04■□□□□ 0.32
UBE3A-227ENST00000638011 LRRD1A4D1F6 860 aa17.04■□□□□ 0.32
UBE3A-227ENST00000638011 PPP2R3AQ06190 1150 aa17.04■□□□□ 0.32
UBE3A-227ENST00000638011 SYTL4Q96C24 671 aaPredicted RBP17.04■□□□□ 0.32
UBE3A-227ENST00000638011 IQCDQ96DY2 449 aa17.04■□□□□ 0.32
UBE3A-227ENST00000638011 PPFIA4O75335 1185 aa17.04■□□□□ 0.32
UBE3A-227ENST00000638011 COG7P83436 770 aa17.04■□□□□ 0.32
UBE3A-227ENST00000638011 RASEFQ8IZ41 740 aa17.04■□□□□ 0.32
UBE3A-227ENST00000638011 SYCP3Q8IZU3 236 aa17.04■□□□□ 0.32
UBE3A-227ENST00000638011 ARHGEF2Q92974 986 aaKnown RBP17.04■□□□□ 0.32
UBE3A-227ENST00000638011 MYH9P35579 1960 aaKnown RBP17.04■□□□□ 0.32
UBE3A-227ENST00000638011 CCDC141Q6ZP82 1450 aa17.04■□□□□ 0.32
UBE3A-227ENST00000638011 GOLGA6BA6NDN3 693 aa17.04■□□□□ 0.32
UBE3A-227ENST00000638011 TCERG1LQ5VWI1 586 aa17.04■□□□□ 0.32
UBE3A-227ENST00000638011 CHMP4BP1P59074 171 aa17.03■□□□□ 0.32
UBE3A-227ENST00000638011 PRPF31Q8WWY3 499 aaKnown RBP17.03■□□□□ 0.32
UBE3A-227ENST00000638011 ZSCAN22P10073 491 aaPredicted RBP17.03■□□□□ 0.32
UBE3A-227ENST00000638011 TACO1Q9BSH4 297 aaKnown RBP17.03■□□□□ 0.32
UBE3A-227ENST00000638011 ARL1P40616 181 aaPredicted RBP17.03■□□□□ 0.32
UBE3A-227ENST00000638011 RUFY3Q7L099 469 aa17.03■□□□□ 0.32
UBE3A-227ENST00000638011 SMARCC2Q8TAQ2 1214 aa17.03■□□□□ 0.32
UBE3A-227ENST00000638011 ATP2A3Q93084 1043 aa17.03■□□□□ 0.32
UBE3A-227ENST00000638011 HAUS2Q9NVX0 235 aa17.03■□□□□ 0.32
UBE3A-227ENST00000638011 LRP2BPQ9P2M1 347 aa17.03■□□□□ 0.32
UBE3A-227ENST00000638011 PPP1R7Q15435 360 aa17.03■□□□□ 0.32
UBE3A-227ENST00000638011 RBM27Q9P2N5 1060 aaKnown RBP17.03■□□□□ 0.32
UBE3A-227ENST00000638011 UBA5Q9GZZ9 404 aa17.03■□□□□ 0.32
UBE3A-227ENST00000638011 EFCAB5A4FU69 1503 aa17.03■□□□□ 0.32
UBE3A-227ENST00000638011 GOLGA8QA0A0J9YX86 632 aa17.02■□□□□ 0.32
UBE3A-227ENST00000638011 GOLGA8OA6NCC3 632 aa17.02■□□□□ 0.32
UBE3A-227ENST00000638011 GOLGA8NF8WBI6 632 aa17.02■□□□□ 0.32
UBE3A-227ENST00000638011 BRD2P25440 801 aaKnown RBP17.02■□□□□ 0.32
UBE3A-227ENST00000638011 RILPL1Q5EBL4 403 aa17.02■□□□□ 0.32
UBE3A-227ENST00000638011 SNX21Q969T3 373 aa17.02■□□□□ 0.32
UBE3A-227ENST00000638011 EXOSC9Q06265 439 aaKnown RBP17.02■□□□□ 0.32
UBE3A-227ENST00000638011 VWA3BQ502W6 1294 aa17.02■□□□□ 0.32
UBE3A-227ENST00000638011 CABS1Q96KC9 395 aa17.02■□□□□ 0.32
UBE3A-227ENST00000638011 PTPRCP08575 1304 aa17.02■□□□□ 0.32
UBE3A-227ENST00000638011 XRCC6P12956 609 aaKnown RBP eCLIP17.02■□□□□ 0.323e-10■■■■■ 28.4
UBE3A-227ENST00000638011 EVI5LQ96CN4 794 aa17.02■□□□□ 0.32
UBE3A-227ENST00000638011 TTF2Q9UNY4 1162 aaKnown RBP17.02■□□□□ 0.32
UBE3A-227ENST00000638011 LRRC9Q6ZRR7 1453 aa17.02■□□□□ 0.32
UBE3A-227ENST00000638011 TTF1Q15361 905 aaPredicted RBP17.02■□□□□ 0.32
UBE3A-227ENST00000638011 DEUP1Q05D60 604 aa17.02■□□□□ 0.31
UBE3A-227ENST00000638011 C1orf115Q9H7X2 142 aa17.02■□□□□ 0.31
UBE3A-227ENST00000638011 ZKSCAN8Q15776 578 aaPredicted RBP17.01■□□□□ 0.31
UBE3A-227ENST00000638011 TMTC2Q8N394 836 aa17.01■□□□□ 0.31
UBE3A-227ENST00000638011 PLCD3Q8N3E9 789 aa17.01■□□□□ 0.31
UBE3A-227ENST00000638011 CPLX3Q8WVH0 158 aa17.01■□□□□ 0.31
UBE3A-227ENST00000638011 WDR97A6NE52 1622 aa17.01■□□□□ 0.31
UBE3A-227ENST00000638011 TBCAO75347 108 aaKnown RBP17.01■□□□□ 0.31
UBE3A-227ENST00000638011 MPHOSPH6Q99547 160 aaKnown RBP17.01■□□□□ 0.31
UBE3A-227ENST00000638011 FERMT3Q86UX7 667 aa17.01■□□□□ 0.31
UBE3A-227ENST00000638011 UBLCP1Q8WVY7 318 aaPredicted RBP17.01■□□□□ 0.31
UBE3A-227ENST00000638011 ATP6V0A2Q9Y487 856 aa17.01■□□□□ 0.31
UBE3A-227ENST00000638011 LGSNQ5TDP6 509 aa17.01■□□□□ 0.31
UBE3A-227ENST00000638011 IMPG2Q9BZV3 1241 aa17.01■□□□□ 0.31
UBE3A-227ENST00000638011 PARP2Q9UGN5 583 aa17.01■□□□□ 0.31
UBE3A-227ENST00000638011 SATB2Q9UPW6 733 aa17.01■□□□□ 0.31
UBE3A-227ENST00000638011 GIPC1O14908 333 aa17.01■□□□□ 0.31
UBE3A-227ENST00000638011 GSDMBQ8TAX9 411 aa17.01■□□□□ 0.31
UBE3A-227ENST00000638011 STAT6P42226 847 aa17■□□□□ 0.31
UBE3A-227ENST00000638011 MSH5O43196 834 aa17■□□□□ 0.31
UBE3A-227ENST00000638011 FCHSD2O94868 740 aa17■□□□□ 0.31
UBE3A-227ENST00000638011 SSFA2P28290 1259 aa17■□□□□ 0.31
UBE3A-227ENST00000638011 UBL4BQ8N7F7 174 aa17■□□□□ 0.31
UBE3A-227ENST00000638011 GOLGA5Q8TBA6 731 aa17■□□□□ 0.31
UBE3A-227ENST00000638011 KCNK9Q9NPC2 374 aa17■□□□□ 0.31
UBE3A-227ENST00000638011 NPHP3Q7Z494 1330 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms