RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 MPNDQ8N594 471 aa14.28□□□□□ -0.12
PTPN7-219ENST00000629151 ZNF594Q96JF6 807 aaPredicted RBP14.28□□□□□ -0.12
PTPN7-219ENST00000629151 VPS33BQ9H267 617 aa14.28□□□□□ -0.12
PTPN7-219ENST00000629151 KIF13BQ9NQT8 1826 aa14.28□□□□□ -0.12
PTPN7-219ENST00000629151 AKAP2Q9Y2D5 859 aa14.28□□□□□ -0.12
PTPN7-219ENST00000629151 LEMD3Q9Y2U8 911 aa14.28□□□□□ -0.12
PTPN7-219ENST00000629151 DDX60Q8IY21 1712 aaKnown RBP14.27□□□□□ -0.12
PTPN7-219ENST00000629151 XDHP47989 1333 aa14.27□□□□□ -0.12
PTPN7-219ENST00000629151 ATP2B4P23634 1241 aa14.27□□□□□ -0.13
PTPN7-219ENST00000629151 METTL24Q5JXM2 366 aa14.27□□□□□ -0.13
PTPN7-219ENST00000629151 PPP4R2Q9NY27 417 aa14.27□□□□□ -0.13
PTPN7-219ENST00000629151 ANKIB1Q9P2G1 1089 aa14.27□□□□□ -0.13
PTPN7-219ENST00000629151 ZBTB47Q9UFB7 747 aaPredicted RBP14.27□□□□□ -0.13
PTPN7-219ENST00000629151 NSFL1CQ9UNZ2 370 aaKnown RBP14.27□□□□□ -0.13
PTPN7-219ENST00000629151 C21orf2O43822 256 aa14.26□□□□□ -0.13
PTPN7-219ENST00000629151 PDE8BO95263 885 aa14.26□□□□□ -0.13
PTPN7-219ENST00000629151 CHRNDQ07001 517 aa14.26□□□□□ -0.13
PTPN7-219ENST00000629151 UBE4AQ14139 1066 aa14.26□□□□□ -0.13
PTPN7-219ENST00000629151 DPP8Q6V1X1 898 aaPredicted RBP14.26□□□□□ -0.13
PTPN7-219ENST00000629151 ATG9AQ7Z3C6 839 aa14.26□□□□□ -0.13
PTPN7-219ENST00000629151 KIF1BPQ96EK5 621 aa14.26□□□□□ -0.13
PTPN7-219ENST00000629151 PSMD1Q99460 953 aa14.26□□□□□ -0.13
PTPN7-219ENST00000629151 SIL1Q9H173 461 aa14.26□□□□□ -0.13
PTPN7-219ENST00000629151 GPR108Q9NPR9 543 aa14.26□□□□□ -0.13
PTPN7-219ENST00000629151 PA2G4Q9UQ80 394 aaKnown RBP14.26□□□□□ -0.13
PTPN7-219ENST00000629151 TNRC6CQ9HCJ0 1690 aaKnown RBP14.26□□□□□ -0.13
PTPN7-219ENST00000629151 KCNJ4P48050 445 aa14.25□□□□□ -0.13
PTPN7-219ENST00000629151 LRRC24Q50LG9 513 aa14.25□□□□□ -0.13
PTPN7-219ENST00000629151 KLHDC4Q8TBB5 520 aa14.25□□□□□ -0.13
PTPN7-219ENST00000629151 EYA3Q99504 573 aa14.25□□□□□ -0.13
PTPN7-219ENST00000629151 RTFDC1Q9BY42 306 aaPredicted RBP14.25□□□□□ -0.13
PTPN7-219ENST00000629151 PUS3Q9BZE2 481 aaKnown RBP14.25□□□□□ -0.13
PTPN7-219ENST00000629151 GGA1Q9UJY5 639 aa14.25□□□□□ -0.13
PTPN7-219ENST00000629151 ANKRD31Q8N7Z5 1873 aa14.25□□□□□ -0.13
PTPN7-219ENST00000629151 PUM3Q15397 648 aaKnown RBP14.24□□□□□ -0.13
PTPN7-219ENST00000629151 GPR162Q16538 588 aa14.24□□□□□ -0.13
PTPN7-219ENST00000629151 SMC5Q8IY18 1101 aa14.24□□□□□ -0.13
PTPN7-219ENST00000629151 CCDC136Q96JN2 1154 aa14.24□□□□□ -0.13
PTPN7-219ENST00000629151 EXOC6BQ9Y2D4 811 aa14.24□□□□□ -0.13
PTPN7-219ENST00000629151 LTBP3Q9NS15 1303 aa14.23□□□□□ -0.13
PTPN7-219ENST00000629151 IFIT1P09914 478 aaKnown RBP14.23□□□□□ -0.13
PTPN7-219ENST00000629151 GPSM2P81274 684 aa14.23□□□□□ -0.13
PTPN7-219ENST00000629151 FKBP4Q02790 459 aaKnown RBP eCLIP14.23□□□□□ -0.13
PTPN7-219ENST00000629151 C15orf52Q6ZUT6 534 aaKnown RBP14.23□□□□□ -0.13
PTPN7-219ENST00000629151 CLASRPQ8N2M8 674 aaKnown RBP14.23□□□□□ -0.13
PTPN7-219ENST00000629151 RHPN1Q8TCX5 695 aa14.23□□□□□ -0.13
PTPN7-219ENST00000629151 LPIN2Q92539 896 aa14.23□□□□□ -0.13
PTPN7-219ENST00000629151 LRRCC1Q9C099 1032 aa14.23□□□□□ -0.13
PTPN7-219ENST00000629151 TAOK3Q9H2K8 898 aa14.23□□□□□ -0.13
PTPN7-219ENST00000629151 ZNF804BA4D1E1 1349 aa14.22□□□□□ -0.13
PTPN7-219ENST00000629151 C6orf229H3BNL8 230 aa14.22□□□□□ -0.13
PTPN7-219ENST00000629151 SASH1O94885 1247 aa14.22□□□□□ -0.13
PTPN7-219ENST00000629151 CENPQQ7L2Z9 268 aaPredicted RBP14.22□□□□□ -0.13
PTPN7-219ENST00000629151 VGLL2Q8N8G2 317 aa14.22□□□□□ -0.13
PTPN7-219ENST00000629151 TBC1D16Q8TBP0 767 aa14.22□□□□□ -0.13
PTPN7-219ENST00000629151 ZC3H12CQ9C0D7 883 aaKnown RBP14.22□□□□□ -0.13
PTPN7-219ENST00000629151 UFL1O94874 794 aa14.21□□□□□ -0.13
PTPN7-219ENST00000629151 IGHDP01880 384 aa14.21□□□□□ -0.13
PTPN7-219ENST00000629151 SLC5A1P13866 664 aa14.21□□□□□ -0.13
PTPN7-219ENST00000629151 TFCP2Q12800 502 aa14.21□□□□□ -0.13
PTPN7-219ENST00000629151 ATP2B3Q16720 1220 aa14.21□□□□□ -0.13
PTPN7-219ENST00000629151 CAVIN4Q5BKX8 364 aa14.21□□□□□ -0.13
PTPN7-219ENST00000629151 ARHGAP27Q6ZUM4 889 aa14.21□□□□□ -0.13
PTPN7-219ENST00000629151 PELP1Q8IZL8 1130 aaKnown RBP14.21□□□□□ -0.13
PTPN7-219ENST00000629151 ZNF219Q9P2Y4 722 aaPredicted RBP14.21□□□□□ -0.13
PTPN7-219ENST00000629151 MYH3P11055 1940 aa14.21□□□□□ -0.14
PTPN7-219ENST00000629151 ZBTB22O15209 634 aa14.2□□□□□ -0.14
PTPN7-219ENST00000629151 TAF5LO75529 589 aa14.2□□□□□ -0.14
PTPN7-219ENST00000629151 FGFR2P21802 821 aa14.2□□□□□ -0.14
PTPN7-219ENST00000629151 WASHC4Q2M389 1173 aa14.2□□□□□ -0.14
PTPN7-219ENST00000629151 HELBQ8NG08 1087 aaPredicted RBP14.2□□□□□ -0.14
PTPN7-219ENST00000629151 TNNI3KQ59H18 835 aa14.19□□□□□ -0.14
PTPN7-219ENST00000629151 ANKRD45Q5TZF3 282 aa14.19□□□□□ -0.14
PTPN7-219ENST00000629151 GNL3LQ9NVN8 582 aaKnown RBP14.19□□□□□ -0.14
PTPN7-219ENST00000629151 POLLQ9UGP5 575 aa14.19□□□□□ -0.14
PTPN7-219ENST00000629151 WWC3Q9ULE0 1092 aa14.19□□□□□ -0.14
PTPN7-219ENST00000629151 FPGT-TNNI3KV9GXZ4 949 aa14.19□□□□□ -0.14
PTPN7-219ENST00000629151 DLEC1Q9Y238 1755 aa14.19□□□□□ -0.14
PTPN7-219ENST00000629151 COL11A2P13942 1736 aaPredicted RBP14.18□□□□□ -0.14
PTPN7-219ENST00000629151 KIAA1551Q9HCM1 1747 aa14.18□□□□□ -0.14
PTPN7-219ENST00000629151 A0A1B0GUL7 405 aa14.18□□□□□ -0.14
PTPN7-219ENST00000629151 G3V3G9 751 aa14.18□□□□□ -0.14
PTPN7-219ENST00000629151 IFIT2P09913 472 aaKnown RBP14.18□□□□□ -0.14
PTPN7-219ENST00000629151 YBX3P16989 372 aaKnown RBP eCLIP14.18□□□□□ -0.143e-8■□□□□ 10.5
PTPN7-219ENST00000629151 KIAA2012Q0VF49 1180 aa14.18□□□□□ -0.14
PTPN7-219ENST00000629151 GORABQ5T7V8 394 aa14.18□□□□□ -0.14
PTPN7-219ENST00000629151 DCAF8Q5TAQ9 597 aa14.18□□□□□ -0.14
PTPN7-219ENST00000629151 OLFM4Q6UX06 510 aa14.18□□□□□ -0.14
PTPN7-219ENST00000629151 ZNF804AQ7Z570 1209 aa14.18□□□□□ -0.14
PTPN7-219ENST00000629151 VPS37DQ86XT2 251 aa14.18□□□□□ -0.14
PTPN7-219ENST00000629151 COA1Q9GZY4 146 aa14.18□□□□□ -0.14
PTPN7-219ENST00000629151 MED23Q9ULK4 1368 aa14.18□□□□□ -0.14
PTPN7-219ENST00000629151 SNED1Q8TER0 1413 aa14.17□□□□□ -0.14
PTPN7-219ENST00000629151 APBB1O00213 710 aa14.17□□□□□ -0.14
PTPN7-219ENST00000629151 LMNB1P20700 586 aa14.17□□□□□ -0.14
PTPN7-219ENST00000629151 HIBADHP31937 336 aaKnown RBP14.17□□□□□ -0.14
PTPN7-219ENST00000629151 IARSP41252 1262 aaKnown RBP14.17□□□□□ -0.14
PTPN7-219ENST00000629151 NUCB1Q02818 461 aa14.17□□□□□ -0.14
PTPN7-219ENST00000629151 CCDC158Q5M9N0 1113 aa14.17□□□□□ -0.14
PTPN7-219ENST00000629151 PODNQ7Z5L7 613 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms