RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 IFIT1P09914 478 aaKnown RBP23.59■■□□□ 1.37
PCDHB11-202ENST00000624887 MEX3CQ5U5Q3 659 aaKnown RBP23.59■■□□□ 1.37
PCDHB11-202ENST00000624887 CCDC85AQ96PX6 553 aaPredicted RBP23.59■■□□□ 1.37
PCDHB11-202ENST00000624887 ALDH8A1Q9H2A2 487 aaPredicted RBP23.59■■□□□ 1.37
PCDHB11-202ENST00000624887 CTSWP56202 376 aa23.58■■□□□ 1.37
PCDHB11-202ENST00000624887 BLOC1S2Q6QNY1 142 aa23.58■■□□□ 1.37
PCDHB11-202ENST00000624887 SEC62Q99442 399 aaKnown RBP23.58■■□□□ 1.37
PCDHB11-202ENST00000624887 U3KPZ7 1027 aaPredicted RBP23.58■■□□□ 1.37
PCDHB11-202ENST00000624887 PRPF40AO75400 957 aaKnown RBP23.58■■□□□ 1.36
PCDHB11-202ENST00000624887 XRCC6P12956 609 aaKnown RBP eCLIP23.58■■□□□ 1.36
PCDHB11-202ENST00000624887 HELLSQ9NRZ9 838 aa23.58■■□□□ 1.36
PCDHB11-202ENST00000624887 TRMT112Q9UI30 125 aaKnown RBP23.58■■□□□ 1.36
PCDHB11-202ENST00000624887 TBC1D2BQ9UPU7 963 aa23.58■■□□□ 1.36
PCDHB11-202ENST00000624887 IRS4O14654 1257 aaPredicted RBP23.57■■□□□ 1.36
PCDHB11-202ENST00000624887 MRE11P49959 708 aa23.57■■□□□ 1.36
PCDHB11-202ENST00000624887 EIF5P55010 431 aaKnown RBP23.57■■□□□ 1.36
PCDHB11-202ENST00000624887 KRT32Q14532 448 aa23.57■■□□□ 1.36
PCDHB11-202ENST00000624887 CCDC129Q6ZRS4 1044 aa23.57■■□□□ 1.36
PCDHB11-202ENST00000624887 ZNF34Q8IZ26 560 aa23.57■■□□□ 1.36
PCDHB11-202ENST00000624887 TAF6LQ9Y6J9 622 aa23.57■■□□□ 1.36
PCDHB11-202ENST00000624887 ITGA6P23229 1130 aa23.56■■□□□ 1.36
PCDHB11-202ENST00000624887 RPS6KB1P23443 525 aa23.56■■□□□ 1.36
PCDHB11-202ENST00000624887 CCDC158Q5M9N0 1113 aa23.56■■□□□ 1.36
PCDHB11-202ENST00000624887 ACSBG1Q96GR2 724 aa23.56■■□□□ 1.36
PCDHB11-202ENST00000624887 SMC3Q9UQE7 1217 aa23.56■■□□□ 1.36
PCDHB11-202ENST00000624887 CICQ96RK0 1608 aaPredicted RBP23.56■■□□□ 1.36
PCDHB11-202ENST00000624887 ANKRD1Q15327 319 aa23.56■■□□□ 1.36
PCDHB11-202ENST00000624887 INTS5Q6P9B9 1019 aaKnown RBP23.56■■□□□ 1.36
PCDHB11-202ENST00000624887 XAGE2Q96GT9 111 aa23.56■■□□□ 1.36
PCDHB11-202ENST00000624887 GREM2Q9H772 168 aa23.56■■□□□ 1.36
PCDHB11-202ENST00000624887 CCDC87Q9NVE4 849 aa23.56■■□□□ 1.36
PCDHB11-202ENST00000624887 RIPOR2Q9Y4F9 1068 aa23.56■■□□□ 1.36
PCDHB11-202ENST00000624887 ZMYM1Q5SVZ6 1142 aa23.55■■□□□ 1.36
PCDHB11-202ENST00000624887 CHAMP1Q96JM3 812 aa23.55■■□□□ 1.36
PCDHB11-202ENST00000624887 UBN2Q6ZU65 1347 aa23.55■■□□□ 1.36
PCDHB11-202ENST00000624887 RIC1Q4ADV7 1423 aa23.55■■□□□ 1.36
PCDHB11-202ENST00000624887 RREB1Q92766 1687 aa23.55■■□□□ 1.36
PCDHB11-202ENST00000624887 ANKRD18BA2A2Z9 1011 aa23.54■■□□□ 1.36
PCDHB11-202ENST00000624887 PDE8AO60658 829 aa23.54■■□□□ 1.36
PCDHB11-202ENST00000624887 COL9A3Q14050 684 aaPredicted RBP23.54■■□□□ 1.36
PCDHB11-202ENST00000624887 ME3Q16798 604 aa23.54■■□□□ 1.36
PCDHB11-202ENST00000624887 CCDC83Q8IWF9 413 aa23.54■■□□□ 1.36
PCDHB11-202ENST00000624887 TPCN1Q9ULQ1 816 aa23.54■■□□□ 1.36
PCDHB11-202ENST00000624887 LOC102724428A0A0B4J2F2 783 aa23.54■■□□□ 1.36
PCDHB11-202ENST00000624887 ADORA1P30542 326 aa23.54■■□□□ 1.36
PCDHB11-202ENST00000624887 ATP6V1AP38606 617 aa23.54■■□□□ 1.36
PCDHB11-202ENST00000624887 SIK1P57059 783 aa23.54■■□□□ 1.36
PCDHB11-202ENST00000624887 LDHAL6AQ6ZMR3 332 aa23.54■■□□□ 1.36
PCDHB11-202ENST00000624887 CRKLP46109 303 aaKnown RBP23.53■■□□□ 1.36
PCDHB11-202ENST00000624887 TTC39AQ5SRH9 613 aa23.53■■□□□ 1.36
PCDHB11-202ENST00000624887 GORABQ5T7V8 394 aa23.53■■□□□ 1.36
PCDHB11-202ENST00000624887 GRPEL1Q9HAV7 217 aa23.53■■□□□ 1.36
PCDHB11-202ENST00000624887 A0A0G2JS52 829 aa23.52■■□□□ 1.36
PCDHB11-202ENST00000624887 RNF113AO15541 343 aaKnown RBP23.52■■□□□ 1.36
PCDHB11-202ENST00000624887 ST3GAL1Q11201 340 aa23.52■■□□□ 1.36
PCDHB11-202ENST00000624887 GAS2L3Q86XJ1 694 aa23.52■■□□□ 1.36
PCDHB11-202ENST00000624887 DSCC1Q9BVC3 393 aa23.52■■□□□ 1.36
PCDHB11-202ENST00000624887 ABCC12Q96J65 1359 aa23.52■■□□□ 1.36
PCDHB11-202ENST00000624887 STX6O43752 255 aa23.52■■□□□ 1.36
PCDHB11-202ENST00000624887 SYT1P21579 422 aa23.52■■□□□ 1.36
PCDHB11-202ENST00000624887 METTL24Q5JXM2 366 aa23.52■■□□□ 1.36
PCDHB11-202ENST00000624887 GPT2Q8TD30 523 aa23.52■■□□□ 1.36
PCDHB11-202ENST00000624887 AK7Q96M32 723 aa23.52■■□□□ 1.36
PCDHB11-202ENST00000624887 AFF2P51816 1311 aa23.51■■□□□ 1.35
PCDHB11-202ENST00000624887 CYP21A2P08686 494 aa23.51■■□□□ 1.35
PCDHB11-202ENST00000624887 ZSCAN22P10073 491 aaPredicted RBP23.51■■□□□ 1.35
PCDHB11-202ENST00000624887 NCLP19338 710 aaKnown RBP23.51■■□□□ 1.35
PCDHB11-202ENST00000624887 GJB2P29033 226 aa23.51■■□□□ 1.35
PCDHB11-202ENST00000624887 TOB2Q14106 344 aaPredicted RBP23.51■■□□□ 1.35
PCDHB11-202ENST00000624887 ATP2B3Q16720 1220 aa23.51■■□□□ 1.35
PCDHB11-202ENST00000624887 LRRFIP1Q32MZ4 808 aaKnown RBP23.51■■□□□ 1.35
PCDHB11-202ENST00000624887 NEK1Q96PY6 1258 aa23.51■■□□□ 1.35
PCDHB11-202ENST00000624887 FKBP4Q02790 459 aaKnown RBP eCLIP23.5■■□□□ 1.35
PCDHB11-202ENST00000624887 ITPK1Q13572 414 aa23.5■■□□□ 1.35
PCDHB11-202ENST00000624887 SLFNL1Q499Z3 407 aa23.5■■□□□ 1.35
PCDHB11-202ENST00000624887 CAVIN1Q6NZI2 390 aaKnown RBP23.5■■□□□ 1.35
PCDHB11-202ENST00000624887 CNNM1Q9NRU3 951 aa23.49■■□□□ 1.35
PCDHB11-202ENST00000624887 MAST3O60307 1309 aa23.49■■□□□ 1.35
PCDHB11-202ENST00000624887 ZNF445P59923 1031 aa23.49■■□□□ 1.35
PCDHB11-202ENST00000624887 VGLL2Q8N8G2 317 aa23.49■■□□□ 1.35
PCDHB11-202ENST00000624887 NECAB1Q8N987 351 aa23.49■■□□□ 1.35
PCDHB11-202ENST00000624887 SMARCC1Q92922 1105 aaPredicted RBP23.49■■□□□ 1.35
PCDHB11-202ENST00000624887 GJD4Q96KN9 370 aaPredicted RBP23.49■■□□□ 1.35
PCDHB11-202ENST00000624887 TCEANC2Q96MN5 208 aa23.49■■□□□ 1.35
PCDHB11-202ENST00000624887 MYH14Q7Z406 1995 aaKnown RBP23.48■■□□□ 1.35
PCDHB11-202ENST00000624887 MBD3O95983 291 aa23.48■■□□□ 1.35
PCDHB11-202ENST00000624887 CAMTA2O94983 1202 aa23.47■■□□□ 1.35
PCDHB11-202ENST00000624887 ZFYP08048 801 aaPredicted RBP23.47■■□□□ 1.35
PCDHB11-202ENST00000624887 SUSD4Q5VX71 490 aa23.47■■□□□ 1.35
PCDHB11-202ENST00000624887 LRP5O75197 1615 aa23.47■■□□□ 1.35
PCDHB11-202ENST00000624887 HSPD1P10809 573 aaKnown RBP23.47■■□□□ 1.35
PCDHB11-202ENST00000624887 SCARF1Q14162 830 aa23.47■■□□□ 1.35
PCDHB11-202ENST00000624887 ZSCAN23Q3MJ62 389 aa23.47■■□□□ 1.35
PCDHB11-202ENST00000624887 ZNF512BQ96KM6 892 aaPredicted RBP23.47■■□□□ 1.35
PCDHB11-202ENST00000624887 PANK2Q9BZ23 570 aa23.47■■□□□ 1.35
PCDHB11-202ENST00000624887 ANO8Q9HCE9 1232 aaPredicted RBP23.47■■□□□ 1.35
PCDHB11-202ENST00000624887 THSD7AQ9UPZ6 1657 aa23.46■■□□□ 1.35
PCDHB11-202ENST00000624887 PDE8BO95263 885 aa23.45■■□□□ 1.35
PCDHB11-202ENST00000624887 F13A1P00488 732 aa23.45■■□□□ 1.35
PCDHB11-202ENST00000624887 PDIA4P13667 645 aaKnown RBP23.45■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms