RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 CASZ1Q86V15 1759 aa25.97■■□□□ 1.75
SPAST-204ENST00000621856 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.97■■□□□ 1.75
SPAST-204ENST00000621856 IFIT1P09914 478 aaKnown RBP25.97■■□□□ 1.75
SPAST-204ENST00000621856 ADORA1P30542 326 aa25.97■■□□□ 1.75
SPAST-204ENST00000621856 IGHMBP2P38935 993 aaKnown RBP25.97■■□□□ 1.75
SPAST-204ENST00000621856 TXNRD1Q16881 649 aa25.97■■□□□ 1.75
SPAST-204ENST00000621856 TTC39AQ5SRH9 613 aa25.97■■□□□ 1.75
SPAST-204ENST00000621856 NDUFB9Q9Y6M9 179 aa25.97■■□□□ 1.75
SPAST-204ENST00000621856 HMGB2P26583 209 aaKnown RBP25.96■■□□□ 1.75
SPAST-204ENST00000621856 NMIQ13287 307 aaPredicted RBP25.96■■□□□ 1.75
SPAST-204ENST00000621856 VGLL2Q8N8G2 317 aa25.95■■□□□ 1.74
SPAST-204ENST00000621856 ABCC12Q96J65 1359 aa25.95■■□□□ 1.74
SPAST-204ENST00000621856 PDE8BO95263 885 aa25.94■■□□□ 1.74
SPAST-204ENST00000621856 SLC10A5Q5PT55 438 aa25.94■■□□□ 1.74
SPAST-204ENST00000621856 TPTE2Q6XPS3 522 aa25.94■■□□□ 1.74
SPAST-204ENST00000621856 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.94■■□□□ 1.74
SPAST-204ENST00000621856 CDC5LQ99459 802 aaKnown RBP25.94■■□□□ 1.74
SPAST-204ENST00000621856 SF3B3Q15393 1217 aaKnown RBP25.94■■□□□ 1.74
SPAST-204ENST00000621856 DDX46Q7L014 1031 aaKnown RBP25.94■■□□□ 1.74
SPAST-204ENST00000621856 PAG1Q9NWQ8 432 aa25.94■■□□□ 1.74
SPAST-204ENST00000621856 RFX7Q2KHR2 1363 aa25.93■■□□□ 1.74
SPAST-204ENST00000621856 RAD50Q92878 1312 aa25.93■■□□□ 1.74
SPAST-204ENST00000621856 NPHP1O15259 732 aa25.93■■□□□ 1.74
SPAST-204ENST00000621856 C3orf67Q6ZVT6 689 aa25.93■■□□□ 1.74
SPAST-204ENST00000621856 FAM227BQ96M60 508 aa25.93■■□□□ 1.74
SPAST-204ENST00000621856 LSG1Q9H089 658 aaKnown RBP25.93■■□□□ 1.74
SPAST-204ENST00000621856 GOLIM4O00461 696 aa25.92■■□□□ 1.74
SPAST-204ENST00000621856 APBA3O96018 575 aa25.92■■□□□ 1.74
SPAST-204ENST00000621856 SSFA2P28290 1259 aa25.92■■□□□ 1.74
SPAST-204ENST00000621856 PUM3Q15397 648 aaKnown RBP25.91■■□□□ 1.74
SPAST-204ENST00000621856 HELBQ8NG08 1087 aaPredicted RBP25.91■■□□□ 1.74
SPAST-204ENST00000621856 CARMIL3Q8ND23 1372 aa25.91■■□□□ 1.74
SPAST-204ENST00000621856 PROM2Q8N271 834 aa25.91■■□□□ 1.74
SPAST-204ENST00000621856 KBTBD3Q8NAB2 608 aa25.91■■□□□ 1.74
SPAST-204ENST00000621856 A0A0D9SFI3 127 aa25.9■■□□□ 1.74
SPAST-204ENST00000621856 ANAPC15P60006 121 aa25.9■■□□□ 1.74
SPAST-204ENST00000621856 ANKRD18AQ8IVF6 992 aa25.9■■□□□ 1.74
SPAST-204ENST00000621856 NLRP3Q96P20 1036 aa25.9■■□□□ 1.74
SPAST-204ENST00000621856 PLSCR1O15162 318 aa25.89■■□□□ 1.74
SPAST-204ENST00000621856 NFIXQ14938 502 aa25.89■■□□□ 1.74
SPAST-204ENST00000621856 LPIN2Q92539 896 aa25.89■■□□□ 1.74
SPAST-204ENST00000621856 ARAP2Q8WZ64 1704 aa25.89■■□□□ 1.74
SPAST-204ENST00000621856 SLC5A1P13866 664 aa25.88■■□□□ 1.73
SPAST-204ENST00000621856 HSPA4P34932 840 aa25.88■■□□□ 1.73
SPAST-204ENST00000621856 FBXO41Q8TF61 875 aa25.88■■□□□ 1.73
SPAST-204ENST00000621856 RGS17Q9UGC6 210 aaPredicted RBP25.88■■□□□ 1.73
SPAST-204ENST00000621856 PALD1Q9ULE6 856 aa25.88■■□□□ 1.73
SPAST-204ENST00000621856 FKBP4Q02790 459 aaKnown RBP eCLIP25.88■■□□□ 1.73
SPAST-204ENST00000621856 CCDC24Q8N4L8 307 aa25.88■■□□□ 1.73
SPAST-204ENST00000621856 EP400Q96L91 3159 aa25.87■■□□□ 1.73
SPAST-204ENST00000621856 CD2BP2O95400 341 aaKnown RBP25.87■■□□□ 1.73
SPAST-204ENST00000621856 FGFR2P21802 821 aa25.87■■□□□ 1.73
SPAST-204ENST00000621856 SPRYD3Q8NCJ5 442 aa25.87■■□□□ 1.73
SPAST-204ENST00000621856 SNRKQ9NRH2 765 aa25.87■■□□□ 1.73
SPAST-204ENST00000621856 CCDC171Q6TFL3 1326 aa25.87■■□□□ 1.73
SPAST-204ENST00000621856 TAF1P21675 1872 aa25.86■■□□□ 1.73
SPAST-204ENST00000621856 ST18O60284 1047 aa25.86■■□□□ 1.73
SPAST-204ENST00000621856 TAF5LO75529 589 aa25.86■■□□□ 1.73
SPAST-204ENST00000621856 PTH1RQ03431 593 aa25.86■■□□□ 1.73
SPAST-204ENST00000621856 POTEAQ6S8J7 498 aa25.86■■□□□ 1.73
SPAST-204ENST00000621856 SLKQ9H2G2 1235 aaPredicted RBP25.86■■□□□ 1.73
SPAST-204ENST00000621856 COL4A1P02462 1669 aa25.86■■□□□ 1.73
SPAST-204ENST00000621856 K7ELQ4 463 aaPredicted RBP25.85■■□□□ 1.73
SPAST-204ENST00000621856 GYS1P13807 737 aa25.85■■□□□ 1.73
SPAST-204ENST00000621856 MED23Q9ULK4 1368 aa25.85■■□□□ 1.73
SPAST-204ENST00000621856 CHRNDQ07001 517 aa25.85■■□□□ 1.73
SPAST-204ENST00000621856 TICAM2Q86XR7 235 aa25.85■■□□□ 1.73
SPAST-204ENST00000621856 CNBD1Q8NA66 436 aa25.85■■□□□ 1.73
SPAST-204ENST00000621856 SCARF1Q14162 830 aa25.84■■□□□ 1.73
SPAST-204ENST00000621856 TNS1Q9HBL0 1735 aaKnown RBP25.84■■□□□ 1.73
SPAST-204ENST00000621856 KCNJ4P48050 445 aa25.83■■□□□ 1.73
SPAST-204ENST00000621856 ZNF512BQ96KM6 892 aaPredicted RBP25.83■■□□□ 1.73
SPAST-204ENST00000621856 ANTXR1Q9H6X2 564 aa25.83■■□□□ 1.73
SPAST-204ENST00000621856 UQCRFS1P1P0C7P4 283 aa25.83■■□□□ 1.72
SPAST-204ENST00000621856 ZAP70P43403 619 aa25.83■■□□□ 1.72
SPAST-204ENST00000621856 LRRFIP1Q32MZ4 808 aaKnown RBP25.83■■□□□ 1.72
SPAST-204ENST00000621856 CCDC102BQ68D86 513 aa25.83■■□□□ 1.72
SPAST-204ENST00000621856 BSDC1Q9NW68 430 aaPredicted RBP25.83■■□□□ 1.72
SPAST-204ENST00000621856 TFCP2L1Q9NZI6 479 aa25.83■■□□□ 1.72
SPAST-204ENST00000621856 A0A1B0GUL6 1792 aa25.82■■□□□ 1.72
SPAST-204ENST00000621856 TNRC6CQ9HCJ0 1690 aaKnown RBP25.82■■□□□ 1.72
SPAST-204ENST00000621856 PHKA1P46020 1223 aa25.82■■□□□ 1.72
SPAST-204ENST00000621856 ZNF589Q86UQ0 364 aaPredicted RBP25.82■■□□□ 1.72
SPAST-204ENST00000621856 CELF1Q92879 486 aaKnown RBP25.82■■□□□ 1.72
SPAST-204ENST00000621856 IL17RAQ96F46 866 aa25.82■■□□□ 1.72
SPAST-204ENST00000621856 MCAMP43121 646 aa25.81■■□□□ 1.72
SPAST-204ENST00000621856 NEK4P51957 841 aa25.81■■□□□ 1.72
SPAST-204ENST00000621856 MCMDC2Q4G0Z9 681 aa25.81■■□□□ 1.72
SPAST-204ENST00000621856 SNX14Q9Y5W7 946 aa25.81■■□□□ 1.72
SPAST-204ENST00000621856 AKAP11Q9UKA4 1901 aa25.81■■□□□ 1.72
SPAST-204ENST00000621856 SNAP23O00161 211 aa25.8■■□□□ 1.72
SPAST-204ENST00000621856 CHGBP05060 677 aa25.8■■□□□ 1.72
SPAST-204ENST00000621856 ZNF827Q17R98 1081 aa25.8■■□□□ 1.72
SPAST-204ENST00000621856 RBM8AQ9Y5S9 174 aaKnown RBP25.8■■□□□ 1.72
SPAST-204ENST00000621856 RNF113AO15541 343 aaKnown RBP25.8■■□□□ 1.72
SPAST-204ENST00000621856 ARID4AP29374 1257 aaPredicted RBP25.8■■□□□ 1.72
SPAST-204ENST00000621856 PRPF40BQ6NWY9 871 aaKnown RBP25.8■■□□□ 1.72
SPAST-204ENST00000621856 PI16Q6UXB8 463 aa25.8■■□□□ 1.72
SPAST-204ENST00000621856 MAP4K1Q92918 833 aa25.8■■□□□ 1.72
SPAST-204ENST00000621856 ANP32EQ9BTT0 268 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms