RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 BCL2L13Q9BXK5 485 aa21.91■■□□□ 1.1
HMGN3-203ENST00000620514 ADARB2Q9NS39 739 aaKnown RBP21.91■■□□□ 1.1
HMGN3-203ENST00000620514 ANKIB1Q9P2G1 1089 aa21.91■■□□□ 1.1
HMGN3-203ENST00000620514 MKRN1Q9UHC7 482 aaKnown RBP21.91■■□□□ 1.1
HMGN3-203ENST00000620514 SHTN1A0MZ66 631 aa21.9■■□□□ 1.1
HMGN3-203ENST00000620514 ECE2O60344 883 aa21.9■■□□□ 1.1
HMGN3-203ENST00000620514 KCNQ5Q9NR82 932 aa21.9■■□□□ 1.1
HMGN3-203ENST00000620514 GGA1Q9UJY5 639 aa21.9■■□□□ 1.1
HMGN3-203ENST00000620514 ZBTB12Q9Y330 459 aaPredicted RBP21.9■■□□□ 1.1
HMGN3-203ENST00000620514 MYH3P11055 1940 aa21.9■■□□□ 1.1
HMGN3-203ENST00000620514 PSMD14O00487 310 aa21.89■■□□□ 1.09
HMGN3-203ENST00000620514 FMR1Q06787 632 aaKnown RBP eCLIP21.89■■□□□ 1.09
HMGN3-203ENST00000620514 CDC5LQ99459 802 aaKnown RBP21.89■■□□□ 1.09
HMGN3-203ENST00000620514 ZC3H12CQ9C0D7 883 aaKnown RBP21.89■■□□□ 1.09
HMGN3-203ENST00000620514 TMEM88BA6NKF7 163 aa21.88■■□□□ 1.09
HMGN3-203ENST00000620514 PLA2G12BQ9BX93 195 aa21.88■■□□□ 1.09
HMGN3-203ENST00000620514 RTL9Q8NET4 1388 aa21.87■■□□□ 1.09
HMGN3-203ENST00000620514 WTIPA6NIX2 430 aaPredicted RBP21.87■■□□□ 1.09
HMGN3-203ENST00000620514 BEND3Q5T5X7 828 aa21.87■■□□□ 1.09
HMGN3-203ENST00000620514 CNOT7Q9UIV1 285 aaKnown RBP21.87■■□□□ 1.09
HMGN3-203ENST00000620514 SPEF2Q9C093 1822 aa21.87■■□□□ 1.09
HMGN3-203ENST00000620514 XDHP47989 1333 aa21.86■■□□□ 1.09
HMGN3-203ENST00000620514 HIRAP54198 1017 aaPredicted RBP21.86■■□□□ 1.09
HMGN3-203ENST00000620514 TRPM4Q8TD43 1214 aa21.86■■□□□ 1.09
HMGN3-203ENST00000620514 BSDC1Q9NW68 430 aaPredicted RBP21.86■■□□□ 1.09
HMGN3-203ENST00000620514 MINPP1Q9UNW1 487 aa21.86■■□□□ 1.09
HMGN3-203ENST00000620514 TRAF5O00463 557 aa21.85■■□□□ 1.09
HMGN3-203ENST00000620514 FAM161AQ3B820 660 aa21.85■■□□□ 1.09
HMGN3-203ENST00000620514 MICALL2Q8IY33 904 aa21.85■■□□□ 1.09
HMGN3-203ENST00000620514 CNTNAP1P78357 1384 aa21.85■■□□□ 1.09
HMGN3-203ENST00000620514 CSF1RP07333 972 aa21.84■■□□□ 1.09
HMGN3-203ENST00000620514 ITGA6P23229 1130 aa21.84■■□□□ 1.09
HMGN3-203ENST00000620514 ATP2B4P23634 1241 aa21.84■■□□□ 1.09
HMGN3-203ENST00000620514 SCN9AQ15858 1988 aa21.84■■□□□ 1.09
HMGN3-203ENST00000620514 G3V3G9 751 aa21.83■■□□□ 1.09
HMGN3-203ENST00000620514 DCAF8Q5TAQ9 597 aa21.83■■□□□ 1.09
HMGN3-203ENST00000620514 DPF2Q92785 391 aa21.83■■□□□ 1.09
HMGN3-203ENST00000620514 E9PSI1 815 aa21.82■■□□□ 1.08
HMGN3-203ENST00000620514 H7C1D1 291 aa21.82■■□□□ 1.08
HMGN3-203ENST00000620514 IGHMBP2P38935 993 aaKnown RBP21.82■■□□□ 1.08
HMGN3-203ENST00000620514 SAMD7Q7Z3H4 446 aa21.82■■□□□ 1.08
HMGN3-203ENST00000620514 HSPA1AP0DMV8 641 aaKnown RBP21.81■■□□□ 1.08
HMGN3-203ENST00000620514 HSPA1BP0DMV9 641 aaKnown RBP21.81■■□□□ 1.08
HMGN3-203ENST00000620514 FOXO4P98177 505 aa21.81■■□□□ 1.08
HMGN3-203ENST00000620514 SLFN5Q08AF3 891 aa21.81■■□□□ 1.08
HMGN3-203ENST00000620514 SLC4A10Q6U841 1118 aa21.81■■□□□ 1.08
HMGN3-203ENST00000620514 GLIS2Q9BZE0 524 aaPredicted RBP21.81■■□□□ 1.08
HMGN3-203ENST00000620514 PGAP2Q9UHJ9 254 aa21.81■■□□□ 1.08
HMGN3-203ENST00000620514 EGFRP00533 1210 aa21.8■■□□□ 1.08
HMGN3-203ENST00000620514 VIL1P09327 827 aaKnown RBP21.8■■□□□ 1.08
HMGN3-203ENST00000620514 RPS12P25398 132 aaKnown RBP21.8■■□□□ 1.08
HMGN3-203ENST00000620514 VEGFBP49765 207 aa21.8■■□□□ 1.08
HMGN3-203ENST00000620514 CCT4P50991 539 aaKnown RBP21.8■■□□□ 1.08
HMGN3-203ENST00000620514 TBC1D10BQ4KMP7 808 aaPredicted RBP21.8■■□□□ 1.08
HMGN3-203ENST00000620514 EPHA10Q5JZY3 1008 aa21.8■■□□□ 1.08
HMGN3-203ENST00000620514 MRPL50Q8N5N7 158 aaKnown RBP21.8■■□□□ 1.08
HMGN3-203ENST00000620514 CDCA7LQ96GN5 454 aa21.8■■□□□ 1.08
HMGN3-203ENST00000620514 CST9Q5W186 159 aa21.79■■□□□ 1.08
HMGN3-203ENST00000620514 ZC3H15Q8WU90 426 aaKnown RBP21.79■■□□□ 1.08
HMGN3-203ENST00000620514 ABT1Q9ULW3 272 aaKnown RBP21.79■■□□□ 1.08
HMGN3-203ENST00000620514 MED23Q9ULK4 1368 aa21.78■■□□□ 1.08
HMGN3-203ENST00000620514 ANKRD18BA2A2Z9 1011 aa21.78■■□□□ 1.08
HMGN3-203ENST00000620514 CCER2I3L3R5 266 aa21.78■■□□□ 1.08
HMGN3-203ENST00000620514 GRM8O00222 908 aa21.78■■□□□ 1.08
HMGN3-203ENST00000620514 RBM26Q5T8P6 1007 aaKnown RBP21.78■■□□□ 1.08
HMGN3-203ENST00000620514 MPHOSPH8Q99549 860 aa21.78■■□□□ 1.08
HMGN3-203ENST00000620514 SRCIN1Q9C0H9 1055 aa21.78■■□□□ 1.08
HMGN3-203ENST00000620514 CHMP3Q9Y3E7 222 aa21.78■■□□□ 1.08
HMGN3-203ENST00000620514 RASSF10A6NK89 507 aa21.77■■□□□ 1.08
HMGN3-203ENST00000620514 ALDH1L1O75891 902 aa21.77■■□□□ 1.08
HMGN3-203ENST00000620514 DEFB115Q30KQ5 88 aa21.77■■□□□ 1.08
HMGN3-203ENST00000620514 TXNRD3Q86VQ6 643 aa21.77■■□□□ 1.08
HMGN3-203ENST00000620514 PCNTO95613 3336 aa21.76■■□□□ 1.07
HMGN3-203ENST00000620514 KLRK1P26718 216 aa21.76■■□□□ 1.07
HMGN3-203ENST00000620514 RSBN1LQ6PCB5 846 aaPredicted RBP21.76■■□□□ 1.07
HMGN3-203ENST00000620514 LMBR1LQ6UX01 489 aa21.76■■□□□ 1.07
HMGN3-203ENST00000620514 SSH1Q8WYL5 1049 aa21.76■■□□□ 1.07
HMGN3-203ENST00000620514 TRPM7Q96QT4 1865 aa21.76■■□□□ 1.07
HMGN3-203ENST00000620514 C9orf78Q9NZ63 289 aaPredicted RBP21.76■■□□□ 1.07
HMGN3-203ENST00000620514 CHRNDQ07001 517 aa21.75■■□□□ 1.07
HMGN3-203ENST00000620514 IFIT5Q13325 482 aaKnown RBP21.75■■□□□ 1.07
HMGN3-203ENST00000620514 DLK2Q6UY11 383 aa21.75■■□□□ 1.07
HMGN3-203ENST00000620514 PODNQ7Z5L7 613 aa21.75■■□□□ 1.07
HMGN3-203ENST00000620514 ANKRD2Q9GZV1 360 aa21.75■■□□□ 1.07
HMGN3-203ENST00000620514 LEMD3Q9Y2U8 911 aa21.75■■□□□ 1.07
HMGN3-203ENST00000620514 ZNF804BA4D1E1 1349 aa21.75■■□□□ 1.07
HMGN3-203ENST00000620514 PSME4Q14997 1843 aa21.74■■□□□ 1.07
HMGN3-203ENST00000620514 CELF2O95319 508 aaKnown RBP21.74■■□□□ 1.07
HMGN3-203ENST00000620514 KIF4BQ2VIQ3 1234 aa21.74■■□□□ 1.07
HMGN3-203ENST00000620514 CDC37L1Q7L3B6 337 aa21.74■■□□□ 1.07
HMGN3-203ENST00000620514 USP48Q86UV5 1035 aa21.74■■□□□ 1.07
HMGN3-203ENST00000620514 USP17L3A6NCW0 530 aa21.73■■□□□ 1.07
HMGN3-203ENST00000620514 USP17L4A6NCW7 530 aa21.73■■□□□ 1.07
HMGN3-203ENST00000620514 SNAP23O00161 211 aa21.73■■□□□ 1.07
HMGN3-203ENST00000620514 COL13A1Q5TAT6 717 aaPredicted RBP21.73■■□□□ 1.07
HMGN3-203ENST00000620514 IFFO2Q5TF58 517 aa21.73■■□□□ 1.07
HMGN3-203ENST00000620514 USP17L1Q7RTZ2 530 aa21.73■■□□□ 1.07
HMGN3-203ENST00000620514 AGBL3Q8NEM8 1001 aa21.73■■□□□ 1.07
HMGN3-203ENST00000620514 HELBQ8NG08 1087 aaPredicted RBP21.73■■□□□ 1.07
HMGN3-203ENST00000620514 SUCLG2Q96I99 432 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms