RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 SETDB2Q96T68 719 aa14.55□□□□□ -0.08
SRRT-216ENST00000618262 NARFQ9UHQ1 456 aa14.55□□□□□ -0.08
SRRT-216ENST00000618262 ERBB4Q15303 1308 aa14.55□□□□□ -0.08
SRRT-216ENST00000618262 RC3H1Q5TC82 1133 aaKnown RBP14.54□□□□□ -0.08
SRRT-216ENST00000618262 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.54□□□□□ -0.08
SRRT-216ENST00000618262 BICC1Q9H694 974 aaKnown RBP14.54□□□□□ -0.08
SRRT-216ENST00000618262 C4BP0C0L5 1744 aa14.54□□□□□ -0.08
SRRT-216ENST00000618262 PA2G4Q9UQ80 394 aaKnown RBP14.54□□□□□ -0.08
SRRT-216ENST00000618262 USP42Q9H9J4 1324 aaKnown RBP14.54□□□□□ -0.08
SRRT-216ENST00000618262 ERFEQ4G0M1 354 aa14.53□□□□□ -0.08
SRRT-216ENST00000618262 DNAJC14Q6Y2X3 702 aaPredicted RBP14.53□□□□□ -0.08
SRRT-216ENST00000618262 CEP83Q9Y592 693 aa14.53□□□□□ -0.08
SRRT-216ENST00000618262 MS4A1P11836 297 aa14.53□□□□□ -0.08
SRRT-216ENST00000618262 KCNJ4P48050 445 aa14.53□□□□□ -0.08
SRRT-216ENST00000618262 ZNF594Q96JF6 807 aaPredicted RBP14.53□□□□□ -0.08
SRRT-216ENST00000618262 MMP10P09238 476 aa14.52□□□□□ -0.08
SRRT-216ENST00000618262 C3orf67Q6ZVT6 689 aa14.52□□□□□ -0.08
SRRT-216ENST00000618262 SIRT2Q8IXJ6 389 aa14.52□□□□□ -0.08
SRRT-216ENST00000618262 TNS1Q9HBL0 1735 aaKnown RBP14.52□□□□□ -0.08
SRRT-216ENST00000618262 OFD1O75665 1012 aa14.52□□□□□ -0.09
SRRT-216ENST00000618262 CT47A1Q5JQC4 288 aaPredicted RBP14.52□□□□□ -0.09
SRRT-216ENST00000618262 KAZALD1Q96I82 304 aa14.52□□□□□ -0.09
SRRT-216ENST00000618262 EXOC6BQ9Y2D4 811 aa14.52□□□□□ -0.09
SRRT-216ENST00000618262 SRGAP3O43295 1099 aa14.52□□□□□ -0.09
SRRT-216ENST00000618262 LMBR1LQ6UX01 489 aa14.52□□□□□ -0.09
SRRT-216ENST00000618262 TRIM6-TRIM34B2RNG4 842 aa14.51□□□□□ -0.09
SRRT-216ENST00000618262 GNAI2P04899 355 aa14.51□□□□□ -0.09
SRRT-216ENST00000618262 TRIM34Q9BYJ4 488 aa14.51□□□□□ -0.09
SRRT-216ENST00000618262 ZNF652Q9Y2D9 606 aa14.51□□□□□ -0.09
SRRT-216ENST00000618262 LAMB4A4D0S4 1761 aa14.51□□□□□ -0.09
SRRT-216ENST00000618262 LY75O60449 1722 aa14.51□□□□□ -0.09
SRRT-216ENST00000618262 SSFA2P28290 1259 aa14.51□□□□□ -0.09
SRRT-216ENST00000618262 PPP1R42Q7Z4L9 355 aa14.51□□□□□ -0.09
SRRT-216ENST00000618262 IRS4O14654 1257 aaPredicted RBP14.5□□□□□ -0.09
SRRT-216ENST00000618262 DDR1Q08345 913 aa14.5□□□□□ -0.09
SRRT-216ENST00000618262 ISCA1Q9BUE6 129 aa14.5□□□□□ -0.09
SRRT-216ENST00000618262 ZNF219Q9P2Y4 722 aaPredicted RBP14.5□□□□□ -0.09
SRRT-216ENST00000618262 SPTY2D1Q68D10 685 aaPredicted RBP14.5□□□□□ -0.09
SRRT-216ENST00000618262 ZNF34Q8IZ26 560 aa14.5□□□□□ -0.09
SRRT-216ENST00000618262 SMARCA5O60264 1052 aaPredicted RBP14.49□□□□□ -0.09
SRRT-216ENST00000618262 UTP14AQ9BVJ6 771 aaKnown RBP14.49□□□□□ -0.09
SRRT-216ENST00000618262 ERVV-1B6SEH8 477 aa14.49□□□□□ -0.09
SRRT-216ENST00000618262 DYNC1I1O14576 645 aa14.49□□□□□ -0.09
SRRT-216ENST00000618262 PDE4AP27815 886 aa14.49□□□□□ -0.09
SRRT-216ENST00000618262 FAM161AQ3B820 660 aa14.49□□□□□ -0.09
SRRT-216ENST00000618262 CCDC191Q8NCU4 936 aa14.49□□□□□ -0.09
SRRT-216ENST00000618262 CEP85Q6P2H3 762 aa14.49□□□□□ -0.09
SRRT-216ENST00000618262 SEC31BQ9NQW1 1179 aa14.49□□□□□ -0.09
SRRT-216ENST00000618262 MRVI1Q9Y6F6 885 aa14.49□□□□□ -0.09
SRRT-216ENST00000618262 TAF1LQ8IZX4 1826 aa14.48□□□□□ -0.09
SRRT-216ENST00000618262 SERPINB2P05120 415 aa14.48□□□□□ -0.09
SRRT-216ENST00000618262 GNAI3P08754 354 aa14.48□□□□□ -0.09
SRRT-216ENST00000618262 PANK2Q9BZ23 570 aa14.48□□□□□ -0.09
SRRT-216ENST00000618262 COL5A3P25940 1745 aaPredicted RBP14.48□□□□□ -0.09
SRRT-216ENST00000618262 CALR3Q96L12 384 aaKnown RBP14.48□□□□□ -0.09
SRRT-216ENST00000618262 ALDH1L1O75891 902 aa14.47□□□□□ -0.09
SRRT-216ENST00000618262 SLC4A3P48751 1232 aa14.47□□□□□ -0.09
SRRT-216ENST00000618262 GREM2Q9H772 168 aa14.47□□□□□ -0.09
SRRT-216ENST00000618262 CCDC125Q86Z20 511 aa14.47□□□□□ -0.09
SRRT-216ENST00000618262 PIAS4Q8N2W9 510 aaPredicted RBP14.47□□□□□ -0.09
SRRT-216ENST00000618262 CNBD1Q8NA66 436 aa14.47□□□□□ -0.09
SRRT-216ENST00000618262 ZBTB38Q8NAP3 1195 aaPredicted RBP14.47□□□□□ -0.09
SRRT-216ENST00000618262 PIK3R5Q8WYR1 880 aa14.47□□□□□ -0.09
SRRT-216ENST00000618262 SNAP23O00161 211 aa14.46□□□□□ -0.09
SRRT-216ENST00000618262 NTSR2O95665 410 aa14.46□□□□□ -0.09
SRRT-216ENST00000618262 BACH2Q9BYV9 841 aa14.46□□□□□ -0.09
SRRT-216ENST00000618262 IL1RAPL2Q9NP60 686 aa14.46□□□□□ -0.09
SRRT-216ENST00000618262 SH3TC1Q8TE82 1336 aa14.46□□□□□ -0.09
SRRT-216ENST00000618262 CARMIL3Q8ND23 1372 aa14.46□□□□□ -0.09
SRRT-216ENST00000618262 ABCC12Q96J65 1359 aa14.46□□□□□ -0.09
SRRT-216ENST00000618262 FSD2A1L4K1 749 aa14.46□□□□□ -0.09
SRRT-216ENST00000618262 SURF6O75683 361 aaKnown RBP14.46□□□□□ -0.09
SRRT-216ENST00000618262 MYCBPQ99417 103 aaPredicted RBP14.46□□□□□ -0.09
SRRT-216ENST00000618262 TSPYL1Q9H0U9 437 aa14.46□□□□□ -0.09
SRRT-216ENST00000618262 ARFGEF2Q9Y6D5 1785 aa14.46□□□□□ -0.1
SRRT-216ENST00000618262 H7C1W4 665 aa14.46□□□□□ -0.1
SRRT-216ENST00000618262 BRD1O95696 1058 aa14.46□□□□□ -0.1
SRRT-216ENST00000618262 HELBQ8NG08 1087 aaPredicted RBP14.46□□□□□ -0.1
SRRT-216ENST00000618262 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.46□□□□□ -0.1
SRRT-216ENST00000618262 TSHZ3Q63HK5 1081 aa14.45□□□□□ -0.1
SRRT-216ENST00000618262 TPTE2Q6XPS3 522 aa14.45□□□□□ -0.1
SRRT-216ENST00000618262 BORCS6Q96GS4 357 aa14.45□□□□□ -0.1
SRRT-216ENST00000618262 WTIPA6NIX2 430 aaPredicted RBP14.45□□□□□ -0.1
SRRT-216ENST00000618262 CCDC172P0C7W6 258 aa14.45□□□□□ -0.1
SRRT-216ENST00000618262 CASP7P55210 303 aa14.45□□□□□ -0.1
SRRT-216ENST00000618262 ZKSCAN8Q15776 578 aaPredicted RBP14.45□□□□□ -0.1
SRRT-216ENST00000618262 ANKRD45Q5TZF3 282 aa14.45□□□□□ -0.1
SRRT-216ENST00000618262 PRR5LQ6MZQ0 368 aa14.45□□□□□ -0.1
SRRT-216ENST00000618262 ANKRD44Q8N8A2 993 aa14.45□□□□□ -0.1
SRRT-216ENST00000618262 PUS3Q9BZE2 481 aaKnown RBP14.45□□□□□ -0.1
SRRT-216ENST00000618262 LNPKQ9C0E8 428 aa14.45□□□□□ -0.1
SRRT-216ENST00000618262 UQCRHLA0A096LP55 91 aa14.44□□□□□ -0.1
SRRT-216ENST00000618262 UQCRHP07919 91 aa14.44□□□□□ -0.1
SRRT-216ENST00000618262 FOXO4P98177 505 aa14.44□□□□□ -0.1
SRRT-216ENST00000618262 CLEC4GQ6UXB4 293 aa14.44□□□□□ -0.1
SRRT-216ENST00000618262 C16orf71Q8IYS4 520 aaPredicted RBP14.44□□□□□ -0.1
SRRT-216ENST00000618262 ADRA2BP18089 450 aa14.44□□□□□ -0.1
SRRT-216ENST00000618262 OLFM4Q6UX06 510 aa14.44□□□□□ -0.1
SRRT-216ENST00000618262 EFCC1Q9HA90 598 aa14.44□□□□□ -0.1
SRRT-216ENST00000618262 POLRMTO00411 1230 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 334.1 ms