RNA–Protein interactions for RNA: ENST00000617489.1

MALAT1-210, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2 BASIC

Gene MALAT1, Length 318 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-210ENST00000617489 USP17L10C9JJH3 530 aa7.36□□□□□ -1.23
MALAT1-210ENST00000617489 USP17L13C9JLJ4 530 aa7.36□□□□□ -1.23
MALAT1-210ENST00000617489 USP17L12C9JPN9 530 aa7.36□□□□□ -1.23
MALAT1-210ENST00000617489 USP17L11C9JVI0 530 aa7.36□□□□□ -1.23
MALAT1-210ENST00000617489 USP17L21D6R901 530 aa7.36□□□□□ -1.23
MALAT1-210ENST00000617489 USP17L18D6R9N7 530 aa7.36□□□□□ -1.23
MALAT1-210ENST00000617489 USP17L22D6RA61 530 aa7.36□□□□□ -1.23
MALAT1-210ENST00000617489 USP17L17D6RBQ6 530 aa7.36□□□□□ -1.23
MALAT1-210ENST00000617489 USP17L19D6RCP7 530 aa7.36□□□□□ -1.23
MALAT1-210ENST00000617489 USP17L20D6RJB6 530 aa7.36□□□□□ -1.23
MALAT1-210ENST00000617489 OPLAHO14841 1288 aa7.36□□□□□ -1.23
MALAT1-210ENST00000617489 IRAK1P51617 712 aa7.36□□□□□ -1.23
MALAT1-210ENST00000617489 USP17L24Q0WX57 530 aa7.36□□□□□ -1.23
MALAT1-210ENST00000617489 CFTRP13569 1480 aa7.36□□□□□ -1.23
MALAT1-210ENST00000617489 FOXO3O43524 673 aa7.35□□□□□ -1.23
MALAT1-210ENST00000617489 TXKP42681 527 aa7.35□□□□□ -1.23
MALAT1-210ENST00000617489 MAP4K3Q8IVH8 894 aa7.35□□□□□ -1.23
MALAT1-210ENST00000617489 CALR3Q96L12 384 aaKnown RBP7.35□□□□□ -1.23
MALAT1-210ENST00000617489 PPP1R12CQ9BZL4 782 aa7.35□□□□□ -1.23
MALAT1-210ENST00000617489 SRA1Q9HD15 236 aaKnown RBP7.35□□□□□ -1.23
MALAT1-210ENST00000617489 STOML1Q9UBI4 398 aa7.35□□□□□ -1.23
MALAT1-210ENST00000617489 RAXQ9Y2V3 346 aa7.35□□□□□ -1.23
MALAT1-210ENST00000617489 COL17A1Q9UMD9 1497 aaPredicted RBP7.35□□□□□ -1.23
MALAT1-210ENST00000617489 FAM196BA6NMK8 535 aa7.34□□□□□ -1.23
MALAT1-210ENST00000617489 GSC2O15499 205 aa7.34□□□□□ -1.23
MALAT1-210ENST00000617489 MMP20O60882 483 aa7.34□□□□□ -1.23
MALAT1-210ENST00000617489 LMOD1P29536 600 aaPredicted RBP7.34□□□□□ -1.23
MALAT1-210ENST00000617489 KANK4Q5T7N3 995 aaPredicted RBP7.34□□□□□ -1.23
MALAT1-210ENST00000617489 TREML1Q86YW5 311 aa7.34□□□□□ -1.23
MALAT1-210ENST00000617489 AGGF1Q8N302 714 aaeCLIP7.34□□□□□ -1.23
MALAT1-210ENST00000617489 EGFRP00533 1210 aa7.33□□□□□ -1.24
MALAT1-210ENST00000617489 SETDB1Q15047 1291 aa7.33□□□□□ -1.24
MALAT1-210ENST00000617489 CLUAP1Q96AJ1 413 aa7.33□□□□□ -1.24
MALAT1-210ENST00000617489 MYO19Q96H55 970 aa7.33□□□□□ -1.24
MALAT1-210ENST00000617489 MUC3BQ9H195 1237 aa7.33□□□□□ -1.24
MALAT1-210ENST00000617489 FANCD2Q9BXW9 1451 aa7.32□□□□□ -1.24
MALAT1-210ENST00000617489 COBLO75128 1261 aa7.32□□□□□ -1.24
MALAT1-210ENST00000617489 IGLV1-40P01703 118 aa7.32□□□□□ -1.24
MALAT1-210ENST00000617489 WEE1P30291 646 aa7.32□□□□□ -1.24
MALAT1-210ENST00000617489 CD97P48960 835 aa7.32□□□□□ -1.24
MALAT1-210ENST00000617489 PROSER2Q86WR7 435 aaPredicted RBP7.32□□□□□ -1.24
MALAT1-210ENST00000617489 KRTAP19-1Q8IUB9 90 aa7.32□□□□□ -1.24
MALAT1-210ENST00000617489 TRIM33Q9UPN9 1127 aa7.32□□□□□ -1.24
MALAT1-210ENST00000617489 PPME1Q9Y570 386 aa7.32□□□□□ -1.24
MALAT1-210ENST00000617489 CEP164Q9UPV0 1460 aa7.31□□□□□ -1.24
MALAT1-210ENST00000617489 DHX15O43143 795 aaKnown RBP7.31□□□□□ -1.24
MALAT1-210ENST00000617489 CACTIN-AS1Q8N1I8 211 aa7.31□□□□□ -1.24
MALAT1-210ENST00000617489 FAM200AQ8TCP9 573 aa7.31□□□□□ -1.24
MALAT1-210ENST00000617489 LRFN2Q9ULH4 789 aa7.31□□□□□ -1.24
MALAT1-210ENST00000617489 LINC01387J3KSC0 135 aa7.3□□□□□ -1.24
MALAT1-210ENST00000617489 TGFB1P01137 390 aa7.3□□□□□ -1.24
MALAT1-210ENST00000617489 SPACA7Q96KW9 195 aa7.3□□□□□ -1.24
MALAT1-210ENST00000617489 CUX2O14529 1486 aa7.3□□□□□ -1.24
MALAT1-210ENST00000617489 MED26O95402 600 aa7.29□□□□□ -1.24
MALAT1-210ENST00000617489 CDC25BP30305 580 aa7.29□□□□□ -1.24
MALAT1-210ENST00000617489 SOX18P35713 384 aa7.29□□□□□ -1.24
MALAT1-210ENST00000617489 NLRP13Q86W25 1043 aa7.29□□□□□ -1.24
MALAT1-210ENST00000617489 UBL7Q96S82 380 aaPredicted RBP7.29□□□□□ -1.24
MALAT1-210ENST00000617489 KRTAP9-9Q9BYP9 154 aa7.29□□□□□ -1.24
MALAT1-210ENST00000617489 KRTAP9-4Q9BYQ2 154 aa7.29□□□□□ -1.24
MALAT1-210ENST00000617489 CEP41Q9BYV8 373 aa7.29□□□□□ -1.24
MALAT1-210ENST00000617489 KCNMB2Q9Y691 235 aa7.29□□□□□ -1.24
MALAT1-210ENST00000617489 ABCC8Q09428 1581 aa7.29□□□□□ -1.24
MALAT1-210ENST00000617489 TAL1P17542 331 aaPredicted RBP7.28□□□□□ -1.24
MALAT1-210ENST00000617489 RFX1P22670 979 aa7.28□□□□□ -1.24
MALAT1-210ENST00000617489 GRIK1P39086 918 aa7.28□□□□□ -1.24
MALAT1-210ENST00000617489 GP2P55259 537 aaKnown RBP7.28□□□□□ -1.24
MALAT1-210ENST00000617489 COX20Q5RI15 118 aa7.28□□□□□ -1.24
MALAT1-210ENST00000617489 Q6ZS46 218 aa7.28□□□□□ -1.24
MALAT1-210ENST00000617489 ACAD11Q709F0 780 aa7.28□□□□□ -1.24
MALAT1-210ENST00000617489 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.28□□□□□ -1.24
MALAT1-210ENST00000617489 FNBP4Q8N3X1 1017 aaPredicted RBP7.28□□□□□ -1.24
MALAT1-210ENST00000617489 ARXQ96QS3 562 aa7.28□□□□□ -1.24
MALAT1-210ENST00000617489 LACRTQ9GZZ8 138 aa7.28□□□□□ -1.24
MALAT1-210ENST00000617489 OAS3Q9Y6K5 1087 aaKnown RBP7.28□□□□□ -1.24
MALAT1-210ENST00000617489 CD68P34810 354 aaPredicted RBP7.27□□□□□ -1.25
MALAT1-210ENST00000617489 CEP135Q66GS9 1140 aa7.27□□□□□ -1.25
MALAT1-210ENST00000617489 FAM117BQ6P1L5 589 aa7.27□□□□□ -1.25
MALAT1-210ENST00000617489 TXNDC11Q6PKC3 985 aa7.27□□□□□ -1.25
MALAT1-210ENST00000617489 GALNT11Q8NCW6 608 aa7.27□□□□□ -1.25
MALAT1-210ENST00000617489 UTP4Q969X6 686 aaKnown RBP7.27□□□□□ -1.25
MALAT1-210ENST00000617489 MRC2Q9UBG0 1479 aa7.27□□□□□ -1.25
MALAT1-210ENST00000617489 KIF21AQ7Z4S6 1674 aa7.26□□□□□ -1.25
MALAT1-210ENST00000617489 FAM177BA6PVY3 158 aa7.26□□□□□ -1.25
MALAT1-210ENST00000617489 UBAP1LF5GYI3 381 aa7.26□□□□□ -1.25
MALAT1-210ENST00000617489 SMNDC1O75940 238 aaKnown RBP eCLIP7.26□□□□□ -1.254e-40■■■■■ 41.9
MALAT1-210ENST00000617489 YBX3P16989 372 aaKnown RBP eCLIP7.26□□□□□ -1.25
MALAT1-210ENST00000617489 BRD2P25440 801 aaKnown RBP7.26□□□□□ -1.25
MALAT1-210ENST00000617489 CDC27P30260 824 aa7.26□□□□□ -1.25
MALAT1-210ENST00000617489 HYAL2Q12891 473 aa7.26□□□□□ -1.25
MALAT1-210ENST00000617489 CDCA8Q53HL2 280 aa7.26□□□□□ -1.25
MALAT1-210ENST00000617489 PRIMPOLQ96LW4 560 aa7.26□□□□□ -1.25
MALAT1-210ENST00000617489 HOXD8P13378 290 aaPredicted RBP7.25□□□□□ -1.25
MALAT1-210ENST00000617489 SCNN1AP37088 669 aa7.25□□□□□ -1.25
MALAT1-210ENST00000617489 NFIAQ12857 509 aa7.25□□□□□ -1.25
MALAT1-210ENST00000617489 DUOXA2Q1HG44 320 aa7.25□□□□□ -1.25
MALAT1-210ENST00000617489 TTC39BQ5VTQ0 682 aaPredicted RBP7.25□□□□□ -1.25
MALAT1-210ENST00000617489 INTS5Q6P9B9 1019 aaKnown RBP7.25□□□□□ -1.25
MALAT1-210ENST00000617489 ARMC10Q8N2F6 343 aa7.25□□□□□ -1.25
MALAT1-210ENST00000617489 PIK3R5Q8WYR1 880 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms