RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 IFIT1BQ5T764 474 aaKnown RBP11.79□□□□□ -0.52
SMARCA1-205ENST00000617310 ZBTB43O43298 467 aa11.79□□□□□ -0.52
SMARCA1-205ENST00000617310 PDE8AO60658 829 aa11.79□□□□□ -0.52
SMARCA1-205ENST00000617310 KIF5BP33176 963 aa11.78□□□□□ -0.52
SMARCA1-205ENST00000617310 MRE11P49959 708 aa11.78□□□□□ -0.52
SMARCA1-205ENST00000617310 HMGN5P82970 282 aaKnown RBP11.78□□□□□ -0.52
SMARCA1-205ENST00000617310 PLS1Q14651 629 aa11.78□□□□□ -0.52
SMARCA1-205ENST00000617310 DPP8Q6V1X1 898 aaPredicted RBP11.78□□□□□ -0.52
SMARCA1-205ENST00000617310 ZGPATQ8N5A5 531 aaKnown RBP11.78□□□□□ -0.52
SMARCA1-205ENST00000617310 SEPT11Q9NVA2 429 aaKnown RBP11.78□□□□□ -0.52
SMARCA1-205ENST00000617310 HIBADHP31937 336 aaKnown RBP11.78□□□□□ -0.52
SMARCA1-205ENST00000617310 ZYXQ15942 572 aaKnown RBP11.78□□□□□ -0.52
SMARCA1-205ENST00000617310 USPL1Q5W0Q7 1092 aa11.78□□□□□ -0.52
SMARCA1-205ENST00000617310 KDM6BO15054 1643 aa11.78□□□□□ -0.52
SMARCA1-205ENST00000617310 H0YIN7 160 aa11.77□□□□□ -0.52
SMARCA1-205ENST00000617310 SYCP1Q15431 976 aa11.77□□□□□ -0.52
SMARCA1-205ENST00000617310 ENOX2Q16206 610 aaKnown RBP11.77□□□□□ -0.52
SMARCA1-205ENST00000617310 FAM196AQ6ZSG2 479 aa11.77□□□□□ -0.52
SMARCA1-205ENST00000617310 PLEKHM2Q8IWE5 1019 aa11.77□□□□□ -0.52
SMARCA1-205ENST00000617310 EYA3Q99504 573 aa11.77□□□□□ -0.52
SMARCA1-205ENST00000617310 MYO5CQ9NQX4 1742 aa11.77□□□□□ -0.53
SMARCA1-205ENST00000617310 PRC1O43663 620 aa11.77□□□□□ -0.53
SMARCA1-205ENST00000617310 TCP10Q12799 353 aa11.77□□□□□ -0.53
SMARCA1-205ENST00000617310 Q6ZUG5 572 aa11.77□□□□□ -0.53
SMARCA1-205ENST00000617310 HEATR3Q7Z4Q2 680 aa11.77□□□□□ -0.53
SMARCA1-205ENST00000617310 GOLGA6L1Q8N7Z2 621 aa11.77□□□□□ -0.53
SMARCA1-205ENST00000617310 XAGE2Q96GT9 111 aa11.77□□□□□ -0.53
SMARCA1-205ENST00000617310 GGA1Q9UJY5 639 aa11.77□□□□□ -0.53
SMARCA1-205ENST00000617310 TEX11Q8IYF3 940 aa11.77□□□□□ -0.53
SMARCA1-205ENST00000617310 RBM17Q96I25 401 aaKnown RBP11.77□□□□□ -0.53
SMARCA1-205ENST00000617310 TMX3Q96JJ7 454 aa11.77□□□□□ -0.53
SMARCA1-205ENST00000617310 ERBB3P21860 1342 aa11.76□□□□□ -0.53
SMARCA1-205ENST00000617310 NLRP1Q9C000 1473 aa11.76□□□□□ -0.53
SMARCA1-205ENST00000617310 ERVV-2B6SEH9 535 aa11.76□□□□□ -0.53
SMARCA1-205ENST00000617310 RNF113AO15541 343 aaKnown RBP11.76□□□□□ -0.53
SMARCA1-205ENST00000617310 ANKRD2Q9GZV1 360 aa11.76□□□□□ -0.53
SMARCA1-205ENST00000617310 TCIRG1Q13488 830 aa11.76□□□□□ -0.53
SMARCA1-205ENST00000617310 TNIP1Q15025 636 aa11.76□□□□□ -0.53
SMARCA1-205ENST00000617310 TNNI3KQ59H18 835 aa11.76□□□□□ -0.53
SMARCA1-205ENST00000617310 CIZ1Q9ULV3 898 aaPredicted RBP11.76□□□□□ -0.53
SMARCA1-205ENST00000617310 FPGT-TNNI3KV9GXZ4 949 aa11.76□□□□□ -0.53
SMARCA1-205ENST00000617310 GCC2Q8IWJ2 1684 aa11.76□□□□□ -0.53
SMARCA1-205ENST00000617310 STX6O43752 255 aa11.76□□□□□ -0.53
SMARCA1-205ENST00000617310 RAB3GAP1Q15042 981 aa11.76□□□□□ -0.53
SMARCA1-205ENST00000617310 SMC5Q8IY18 1101 aa11.76□□□□□ -0.53
SMARCA1-205ENST00000617310 FSIP1Q8NA03 581 aa11.76□□□□□ -0.53
SMARCA1-205ENST00000617310 DEF6Q9H4E7 631 aa11.76□□□□□ -0.53
SMARCA1-205ENST00000617310 ARMT1Q9H993 441 aa11.76□□□□□ -0.53
SMARCA1-205ENST00000617310 BRPF3Q9ULD4 1205 aa11.76□□□□□ -0.53
SMARCA1-205ENST00000617310 INSRP06213 1382 aa11.76□□□□□ -0.53
SMARCA1-205ENST00000617310 ERVK-7P63135 1459 aa11.76□□□□□ -0.53
SMARCA1-205ENST00000617310 NOM1Q5C9Z4 860 aaKnown RBP11.75□□□□□ -0.53
SMARCA1-205ENST00000617310 CCDC70Q6NSX1 233 aa11.75□□□□□ -0.53
SMARCA1-205ENST00000617310 MNS1Q8NEH6 495 aa11.75□□□□□ -0.53
SMARCA1-205ENST00000617310 CARD10Q9BWT7 1032 aa11.75□□□□□ -0.53
SMARCA1-205ENST00000617310 PRDM15P57071 1507 aaPredicted RBP11.75□□□□□ -0.53
SMARCA1-205ENST00000617310 RXRBP28702 533 aa11.75□□□□□ -0.53
SMARCA1-205ENST00000617310 RPS8P62241 208 aaKnown RBP11.75□□□□□ -0.53
SMARCA1-205ENST00000617310 RTN1Q16799 776 aa11.75□□□□□ -0.53
SMARCA1-205ENST00000617310 TBC1D32Q96NH3 1257 aa11.75□□□□□ -0.53
SMARCA1-205ENST00000617310 HOXB7P09629 217 aa11.75□□□□□ -0.53
SMARCA1-205ENST00000617310 APOBRQ0VD83 1088 aa11.75□□□□□ -0.53
SMARCA1-205ENST00000617310 MAP3K11Q16584 847 aa11.75□□□□□ -0.53
SMARCA1-205ENST00000617310 CFAP100Q494V2 611 aa11.75□□□□□ -0.53
SMARCA1-205ENST00000617310 FAM227BQ96M60 508 aa11.75□□□□□ -0.53
SMARCA1-205ENST00000617310 ALG1Q9BT22 464 aa11.75□□□□□ -0.53
SMARCA1-205ENST00000617310 SCAND2PQ9GZW5 306 aaPredicted RBP11.75□□□□□ -0.53
SMARCA1-205ENST00000617310 HMG20BQ9P0W2 317 aa11.75□□□□□ -0.53
SMARCA1-205ENST00000617310 CEP131Q9UPN4 1083 aa11.75□□□□□ -0.53
SMARCA1-205ENST00000617310 SPATA31E1Q6ZUB1 1445 aa11.75□□□□□ -0.53
SMARCA1-205ENST00000617310 NEURL1BA8MQ27 555 aa11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 SEC24BO95487 1268 aa11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 UBA7P41226 1012 aa11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 SP4Q02446 784 aa11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 PUM3Q15397 648 aaKnown RBP11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 PPFIBP1Q86W92 1011 aa11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 SEPT12Q8IYM1 358 aa11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 AATFQ9NY61 560 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 ZCCHC11Q5TAX3 1644 aaKnown RBP11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 NPC1L1Q9UHC9 1359 aa11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 TNPO1Q92973 898 aaKnown RBP11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 USP44Q9H0E7 712 aa11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 LETM1O95202 739 aaPredicted RBP11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 CRKLP46109 303 aaKnown RBP11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 CAGE1Q8TC20 777 aa11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 MAGI2Q86UL8 1455 aa11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 EIF5P55010 431 aaKnown RBP11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 GPR162Q16538 588 aa11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 ZNHIT6Q9NWK9 470 aaKnown RBP11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 AXIN2Q9Y2T1 843 aa11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 WDR17Q8IZU2 1322 aa11.74□□□□□ -0.53
SMARCA1-205ENST00000617310 CDC42BPBQ9Y5S2 1711 aa11.73□□□□□ -0.53
SMARCA1-205ENST00000617310 CHMLP26374 656 aa11.73□□□□□ -0.53
SMARCA1-205ENST00000617310 GYG1P46976 350 aa11.73□□□□□ -0.53
SMARCA1-205ENST00000617310 GTF2IP78347 998 aa11.73□□□□□ -0.53
SMARCA1-205ENST00000617310 CNNM3Q8NE01 707 aa11.73□□□□□ -0.53
SMARCA1-205ENST00000617310 KRT23Q9C075 422 aa11.73□□□□□ -0.53
SMARCA1-205ENST00000617310 B4E1Z4 1266 aa11.73□□□□□ -0.53
SMARCA1-205ENST00000617310 PPIP5K2O43314 1243 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms