RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 LRRC37AA6NMS7 1700 aa13.64□□□□□ -0.23
SSX3-204ENST00000612497 DDX60Q8IY21 1712 aaKnown RBP13.64□□□□□ -0.23
SSX3-204ENST00000612497 TRIOBPQ9H2D6 2365 aa13.64□□□□□ -0.23
SSX3-204ENST00000612497 DLL1O00548 723 aa13.64□□□□□ -0.23
SSX3-204ENST00000612497 EIF4A1P60842 406 aaKnown RBP13.64□□□□□ -0.23
SSX3-204ENST00000612497 SREBF2Q12772 1141 aa13.64□□□□□ -0.23
SSX3-204ENST00000612497 PNISRQ8TF01 805 aaKnown RBP13.64□□□□□ -0.23
SSX3-204ENST00000612497 EYA3Q99504 573 aa13.64□□□□□ -0.23
SSX3-204ENST00000612497 THUMPD2Q9BTF0 503 aaKnown RBP13.64□□□□□ -0.23
SSX3-204ENST00000612497 R3HDMLQ9H3Y0 253 aa13.64□□□□□ -0.23
SSX3-204ENST00000612497 POLLQ9UGP5 575 aa13.64□□□□□ -0.23
SSX3-204ENST00000612497 TRIM17Q9Y577 477 aa13.64□□□□□ -0.23
SSX3-204ENST00000612497 KDM3BQ7LBC6 1761 aa13.63□□□□□ -0.23
SSX3-204ENST00000612497 CEP290O15078 2479 aa13.63□□□□□ -0.23
SSX3-204ENST00000612497 G3V3G9 751 aa13.63□□□□□ -0.23
SSX3-204ENST00000612497 VIL1P09327 827 aaKnown RBP13.63□□□□□ -0.23
SSX3-204ENST00000612497 DCAF8Q5TAQ9 597 aa13.63□□□□□ -0.23
SSX3-204ENST00000612497 TRMT112Q9UI30 125 aaKnown RBP13.63□□□□□ -0.23
SSX3-204ENST00000612497 SCAF8Q9UPN6 1271 aaKnown RBP13.63□□□□□ -0.23
SSX3-204ENST00000612497 RBBP6Q7Z6E9 1792 aaKnown RBP13.63□□□□□ -0.23
SSX3-204ENST00000612497 SH3TC1Q8TE82 1336 aa13.63□□□□□ -0.23
SSX3-204ENST00000612497 EN2P19622 333 aaPredicted RBP13.62□□□□□ -0.23
SSX3-204ENST00000612497 GPSM2P81274 684 aa13.62□□□□□ -0.23
SSX3-204ENST00000612497 PRAMEF18Q5VWM3 479 aa13.62□□□□□ -0.23
SSX3-204ENST00000612497 NLRP10Q86W26 655 aa13.62□□□□□ -0.23
SSX3-204ENST00000612497 ERBB4Q15303 1308 aa13.62□□□□□ -0.23
SSX3-204ENST00000612497 ZNF280AP59817 542 aaPredicted RBP13.61□□□□□ -0.23
SSX3-204ENST00000612497 HSP90AB3PQ58FF7 597 aa13.61□□□□□ -0.23
SSX3-204ENST00000612497 PPP4R3CPQ6ZMV5 832 aa13.61□□□□□ -0.23
SSX3-204ENST00000612497 OTOP1Q7RTM1 612 aa13.61□□□□□ -0.23
SSX3-204ENST00000612497 CELF1Q92879 486 aaKnown RBP13.61□□□□□ -0.23
SSX3-204ENST00000612497 ZNF428Q96B54 188 aa13.61□□□□□ -0.23
SSX3-204ENST00000612497 CFHR5Q9BXR6 569 aa13.61□□□□□ -0.23
SSX3-204ENST00000612497 ZC3H12CQ9C0D7 883 aaKnown RBP13.61□□□□□ -0.23
SSX3-204ENST00000612497 PITPNM2Q9BZ72 1349 aa13.61□□□□□ -0.23
SSX3-204ENST00000612497 SZT2Q5T011 3432 aa13.6□□□□□ -0.23
SSX3-204ENST00000612497 TCIRG1Q13488 830 aa13.6□□□□□ -0.23
SSX3-204ENST00000612497 AGBL3Q8NEM8 1001 aa13.6□□□□□ -0.23
SSX3-204ENST00000612497 TBC1D16Q8TBP0 767 aa13.6□□□□□ -0.23
SSX3-204ENST00000612497 MYOZ2Q9NPC6 264 aa13.6□□□□□ -0.23
SSX3-204ENST00000612497 RNF216Q9NWF9 866 aaPredicted RBP13.6□□□□□ -0.23
SSX3-204ENST00000612497 BRCA2P51587 3418 aa13.6□□□□□ -0.23
SSX3-204ENST00000612497 DLG5Q8TDM6 1919 aa13.6□□□□□ -0.23
SSX3-204ENST00000612497 ALDH1A1P00352 501 aa13.59□□□□□ -0.23
SSX3-204ENST00000612497 ANXA1P04083 346 aa13.59□□□□□ -0.23
SSX3-204ENST00000612497 USP17L8P0C7I0 530 aa13.59□□□□□ -0.23
SSX3-204ENST00000612497 EIF2S2P20042 333 aaKnown RBP13.59□□□□□ -0.23
SSX3-204ENST00000612497 NF2P35240 595 aa13.59□□□□□ -0.23
SSX3-204ENST00000612497 RSBN1LQ6PCB5 846 aaPredicted RBP13.59□□□□□ -0.23
SSX3-204ENST00000612497 SLC17A8Q8NDX2 589 aa13.59□□□□□ -0.23
SSX3-204ENST00000612497 A0A0C4DFX4 3053 aa13.58□□□□□ -0.23
SSX3-204ENST00000612497 AIMP1Q12904 312 aaKnown RBP13.58□□□□□ -0.24
SSX3-204ENST00000612497 PDIA6Q15084 440 aa13.58□□□□□ -0.24
SSX3-204ENST00000612497 PROSER3Q2NL68 480 aa13.58□□□□□ -0.24
SSX3-204ENST00000612497 LRP10Q7Z4F1 713 aa13.58□□□□□ -0.24
SSX3-204ENST00000612497 PTPN12Q05209 780 aaKnown RBP13.57□□□□□ -0.24
SSX3-204ENST00000612497 COPS6Q7L5N1 327 aa13.57□□□□□ -0.24
SSX3-204ENST00000612497 NECTIN2Q92692 538 aa13.57□□□□□ -0.24
SSX3-204ENST00000612497 TMEM106CQ9BVX2 250 aa13.57□□□□□ -0.24
SSX3-204ENST00000612497 PTPN22Q9Y2R2 807 aa13.57□□□□□ -0.24
SSX3-204ENST00000612497 PSME4Q14997 1843 aa13.56□□□□□ -0.24
SSX3-204ENST00000612497 H0YGN5 161 aa13.56□□□□□ -0.24
SSX3-204ENST00000612497 UFL1O94874 794 aa13.56□□□□□ -0.24
SSX3-204ENST00000612497 NEFMP07197 916 aa13.56□□□□□ -0.24
SSX3-204ENST00000612497 PRKG1Q13976 671 aa13.56□□□□□ -0.24
SSX3-204ENST00000612497 NBPF9Q3BBW0 867 aa13.56□□□□□ -0.24
SSX3-204ENST00000612497 SPRYD7Q5W111 196 aa13.56□□□□□ -0.24
SSX3-204ENST00000612497 ARMC9Q7Z3E5 817 aa13.56□□□□□ -0.24
SSX3-204ENST00000612497 ARMC5Q96C12 935 aa13.56□□□□□ -0.24
SSX3-204ENST00000612497 ERO1AQ96HE7 468 aa13.56□□□□□ -0.24
SSX3-204ENST00000612497 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.56□□□□□ -0.24
SSX3-204ENST00000612497 ANKIB1Q9P2G1 1089 aa13.56□□□□□ -0.24
SSX3-204ENST00000612497 ZNF609O15014 1411 aa13.56□□□□□ -0.24
SSX3-204ENST00000612497 RPS8P62241 208 aaKnown RBP13.55□□□□□ -0.24
SSX3-204ENST00000612497 SF3B3Q15393 1217 aaKnown RBP13.55□□□□□ -0.24
SSX3-204ENST00000612497 IFNL1Q8IU54 200 aa13.55□□□□□ -0.24
SSX3-204ENST00000612497 CD99L2Q8TCZ2 262 aa13.55□□□□□ -0.24
SSX3-204ENST00000612497 XAGE3Q8WTP9 111 aa13.55□□□□□ -0.24
SSX3-204ENST00000612497 CNKSR2Q8WXI2 1034 aa13.55□□□□□ -0.24
SSX3-204ENST00000612497 GMLQ99445 158 aa13.55□□□□□ -0.24
SSX3-204ENST00000612497 COL4A1P02462 1669 aa13.54□□□□□ -0.24
SSX3-204ENST00000612497 MANSC4A6NHS7 340 aaPredicted RBP13.54□□□□□ -0.24
SSX3-204ENST00000612497 INHBEP58166 350 aa13.54□□□□□ -0.24
SSX3-204ENST00000612497 OTUD5Q96G74 571 aa13.54□□□□□ -0.24
SSX3-204ENST00000612497 FAM89AQ96GI7 184 aa13.54□□□□□ -0.24
SSX3-204ENST00000612497 EFCC1Q9HA90 598 aa13.54□□□□□ -0.24
SSX3-204ENST00000612497 GGA1Q9UJY5 639 aa13.54□□□□□ -0.24
SSX3-204ENST00000612497 USP17L3A6NCW0 530 aa13.53□□□□□ -0.24
SSX3-204ENST00000612497 USP17L4A6NCW7 530 aa13.53□□□□□ -0.24
SSX3-204ENST00000612497 RTL5Q5HYW3 569 aaPredicted RBP13.53□□□□□ -0.24
SSX3-204ENST00000612497 CHRDL2Q6WN34 429 aa13.53□□□□□ -0.24
SSX3-204ENST00000612497 USP17L1Q7RTZ2 530 aa13.53□□□□□ -0.24
SSX3-204ENST00000612497 SLC10A4Q96EP9 437 aa13.53□□□□□ -0.24
SSX3-204ENST00000612497 PODXL2Q9NZ53 605 aa13.53□□□□□ -0.24
SSX3-204ENST00000612497 TSPYL4Q9UJ04 414 aa13.53□□□□□ -0.24
SSX3-204ENST00000612497 ANGEL1Q9UNK9 670 aaKnown RBP13.53□□□□□ -0.24
SSX3-204ENST00000612497 COL6A3P12111 3177 aa13.52□□□□□ -0.24
SSX3-204ENST00000612497 SLC4A8Q2Y0W8 1093 aa13.52□□□□□ -0.25
SSX3-204ENST00000612497 LDLRAD1Q5T700 205 aa13.52□□□□□ -0.25
SSX3-204ENST00000612497 OGFOD1Q8N543 542 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms