RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 MARCH10Q8NA82 808 aaPredicted RBP33.51■■■□□ 2.95
CSPG5-205ENST00000610462 RTN4Q9NQC3 1192 aaKnown RBP33.51■■■□□ 2.95
CSPG5-205ENST00000610462 TBC1D2BQ9UPU7 963 aa33.51■■■□□ 2.95
CSPG5-205ENST00000610462 NUTM2BA6NNL0 878 aaPredicted RBP33.5■■■□□ 2.95
CSPG5-205ENST00000610462 NUTM2EB1AL46 878 aaPredicted RBP33.5■■■□□ 2.95
CSPG5-205ENST00000610462 ME3Q16798 604 aa33.5■■■□□ 2.95
CSPG5-205ENST00000610462 CCDC158Q5M9N0 1113 aa33.5■■■□□ 2.95
CSPG5-205ENST00000610462 GAS2L3Q86XJ1 694 aa33.5■■■□□ 2.95
CSPG5-205ENST00000610462 NUTM2AQ8IVF1 878 aaPredicted RBP33.5■■■□□ 2.95
CSPG5-205ENST00000610462 TRMT112Q9UI30 125 aaKnown RBP33.5■■■□□ 2.95
CSPG5-205ENST00000610462 IRS4O14654 1257 aaPredicted RBP33.49■■■□□ 2.95
CSPG5-205ENST00000610462 NCLP19338 710 aaKnown RBP33.49■■■□□ 2.95
CSPG5-205ENST00000610462 ZMYM1Q5SVZ6 1142 aa33.49■■■□□ 2.95
CSPG5-205ENST00000610462 XAGE2Q96GT9 111 aa33.49■■■□□ 2.95
CSPG5-205ENST00000610462 SLIT2O94813 1529 aa33.49■■■□□ 2.95
CSPG5-205ENST00000610462 RREB1Q92766 1687 aa33.49■■■□□ 2.95
CSPG5-205ENST00000610462 ZNF34Q8IZ26 560 aa33.49■■■□□ 2.95
CSPG5-205ENST00000610462 TPCN1Q9ULQ1 816 aa33.49■■■□□ 2.95
CSPG5-205ENST00000610462 CICQ96RK0 1608 aaPredicted RBP33.49■■■□□ 2.95
CSPG5-205ENST00000610462 ITGA6P23229 1130 aa33.48■■■□□ 2.95
CSPG5-205ENST00000610462 EIF5P55010 431 aaKnown RBP33.48■■■□□ 2.95
CSPG5-205ENST00000610462 COL9A3Q14050 684 aaPredicted RBP33.48■■■□□ 2.95
CSPG5-205ENST00000610462 BARGINQ6ZT62 677 aa33.48■■■□□ 2.95
CSPG5-205ENST00000610462 GPT2Q8TD30 523 aa33.48■■■□□ 2.95
CSPG5-205ENST00000610462 GREM2Q9H772 168 aa33.48■■■□□ 2.95
CSPG5-205ENST00000610462 RIC1Q4ADV7 1423 aa33.48■■■□□ 2.95
CSPG5-205ENST00000610462 TTC39AQ5SRH9 613 aa33.48■■■□□ 2.95
CSPG5-205ENST00000610462 GORABQ5T7V8 394 aa33.48■■■□□ 2.95
CSPG5-205ENST00000610462 ACSBG1Q96GR2 724 aa33.48■■■□□ 2.95
CSPG5-205ENST00000610462 RIPOR2Q9Y4F9 1068 aa33.48■■■□□ 2.95
CSPG5-205ENST00000610462 ANKRD18BA2A2Z9 1011 aa33.47■■■□□ 2.95
CSPG5-205ENST00000610462 SYT1P21579 422 aa33.47■■■□□ 2.95
CSPG5-205ENST00000610462 ADORA1P30542 326 aa33.47■■■□□ 2.95
CSPG5-205ENST00000610462 ST3GAL1Q11201 340 aa33.47■■■□□ 2.95
CSPG5-205ENST00000610462 INTS5Q6P9B9 1019 aaKnown RBP33.47■■■□□ 2.95
CSPG5-205ENST00000610462 CCDC87Q9NVE4 849 aa33.47■■■□□ 2.95
CSPG5-205ENST00000610462 STX6O43752 255 aa33.46■■■□□ 2.95
CSPG5-205ENST00000610462 PDE8AO60658 829 aa33.46■■■□□ 2.95
CSPG5-205ENST00000610462 ZSCAN22P10073 491 aaPredicted RBP33.46■■■□□ 2.95
CSPG5-205ENST00000610462 CAVIN1Q6NZI2 390 aaKnown RBP33.46■■■□□ 2.95
CSPG5-205ENST00000610462 UBN2Q6ZU65 1347 aa33.46■■■□□ 2.95
CSPG5-205ENST00000610462 RNF113AO15541 343 aaKnown RBP33.46■■■□□ 2.95
CSPG5-205ENST00000610462 GJB2P29033 226 aa33.45■■■□□ 2.95
CSPG5-205ENST00000610462 LDHAL6AQ6ZMR3 332 aa33.45■■■□□ 2.95
CSPG5-205ENST00000610462 A0A0G2JS52 829 aa33.44■■■□□ 2.94
CSPG5-205ENST00000610462 ATP6V1AP38606 617 aa33.44■■■□□ 2.94
CSPG5-205ENST00000610462 DSCC1Q9BVC3 393 aa33.44■■■□□ 2.94
CSPG5-205ENST00000610462 TCHHQ07283 1943 aa33.44■■■□□ 2.94
CSPG5-205ENST00000610462 ZNF445P59923 1031 aa33.44■■■□□ 2.94
CSPG5-205ENST00000610462 TOB2Q14106 344 aaPredicted RBP33.44■■■□□ 2.94
CSPG5-205ENST00000610462 METTL24Q5JXM2 366 aa33.44■■■□□ 2.94
CSPG5-205ENST00000610462 NEK1Q96PY6 1258 aa33.44■■■□□ 2.94
CSPG5-205ENST00000610462 CYP21A2P08686 494 aa33.43■■■□□ 2.94
CSPG5-205ENST00000610462 ABCC12Q96J65 1359 aa33.43■■■□□ 2.94
CSPG5-205ENST00000610462 LOC102724428A0A0B4J2F2 783 aa33.43■■■□□ 2.94
CSPG5-205ENST00000610462 MBD3O95983 291 aa33.43■■■□□ 2.94
CSPG5-205ENST00000610462 CRKLP46109 303 aaKnown RBP33.43■■■□□ 2.94
CSPG5-205ENST00000610462 SIK1P57059 783 aa33.43■■■□□ 2.94
CSPG5-205ENST00000610462 SLFNL1Q499Z3 407 aa33.43■■■□□ 2.94
CSPG5-205ENST00000610462 NECAB1Q8N987 351 aa33.43■■■□□ 2.94
CSPG5-205ENST00000610462 PANK2Q9BZ23 570 aa33.43■■■□□ 2.94
CSPG5-205ENST00000610462 TOM1O60784 492 aa33.42■■■□□ 2.94
CSPG5-205ENST00000610462 ATP2B3Q16720 1220 aa33.42■■■□□ 2.94
CSPG5-205ENST00000610462 LRRFIP1Q32MZ4 808 aaKnown RBP33.42■■■□□ 2.94
CSPG5-205ENST00000610462 TCEANC2Q96MN5 208 aa33.42■■■□□ 2.94
CSPG5-205ENST00000610462 LAMA4Q16363 1823 aa33.42■■■□□ 2.94
CSPG5-205ENST00000610462 FKBP4Q02790 459 aaKnown RBP eCLIP33.41■■■□□ 2.94
CSPG5-205ENST00000610462 ZSCAN23Q3MJ62 389 aa33.41■■■□□ 2.94
CSPG5-205ENST00000610462 PIP4K2BP78356 416 aa33.41■■■□□ 2.94
CSPG5-205ENST00000610462 AK7Q96M32 723 aa33.41■■■□□ 2.94
CSPG5-205ENST00000610462 CNNM1Q9NRU3 951 aa33.41■■■□□ 2.94
CSPG5-205ENST00000610462 MAST3O60307 1309 aa33.4■■■□□ 2.94
CSPG5-205ENST00000610462 MYH7P12883 1935 aa33.4■■■□□ 2.94
CSPG5-205ENST00000610462 MYH14Q7Z406 1995 aaKnown RBP33.39■■■□□ 2.94
CSPG5-205ENST00000610462 F13A1P00488 732 aa33.39■■■□□ 2.94
CSPG5-205ENST00000610462 ITPK1Q13572 414 aa33.38■■■□□ 2.93
CSPG5-205ENST00000610462 LRP5O75197 1615 aa33.38■■■□□ 2.93
CSPG5-205ENST00000610462 ZFYP08048 801 aaPredicted RBP33.37■■■□□ 2.93
CSPG5-205ENST00000610462 VGLL2Q8N8G2 317 aa33.37■■■□□ 2.93
CSPG5-205ENST00000610462 AKAP11Q9UKA4 1901 aa33.37■■■□□ 2.93
CSPG5-205ENST00000610462 HSPD1P10809 573 aaKnown RBP33.37■■■□□ 2.93
CSPG5-205ENST00000610462 SCARF1Q14162 830 aa33.37■■■□□ 2.93
CSPG5-205ENST00000610462 FOXD4L6Q3SYB3 417 aaPredicted RBP33.37■■■□□ 2.93
CSPG5-205ENST00000610462 FOXD4L3Q6VB84 417 aaPredicted RBP33.37■■■□□ 2.93
CSPG5-205ENST00000610462 NSFL1CQ9UNZ2 370 aaKnown RBP33.37■■■□□ 2.93
CSPG5-205ENST00000610462 ATP6V1DQ9Y5K8 247 aa33.37■■■□□ 2.93
CSPG5-205ENST00000610462 TMEM87AQ8NBN3 555 aa33.36■■■□□ 2.93
CSPG5-205ENST00000610462 RBM27Q9P2N5 1060 aaKnown RBP33.36■■■□□ 2.93
CSPG5-205ENST00000610462 MTMR6Q9Y217 621 aa33.36■■■□□ 2.93
CSPG5-205ENST00000610462 PDIA4P13667 645 aaKnown RBP33.35■■■□□ 2.93
CSPG5-205ENST00000610462 SUSD4Q5VX71 490 aa33.35■■■□□ 2.93
CSPG5-205ENST00000610462 SMARCC1Q92922 1105 aaPredicted RBP33.35■■■□□ 2.93
CSPG5-205ENST00000610462 M0R2C6 588 aa33.35■■■□□ 2.93
CSPG5-205ENST00000610462 HMGB1P09429 215 aaKnown RBP33.35■■■□□ 2.93
CSPG5-205ENST00000610462 ZAP70P43403 619 aa33.35■■■□□ 2.93
CSPG5-205ENST00000610462 CAMTA2O94983 1202 aa33.34■■■□□ 2.93
CSPG5-205ENST00000610462 STOX1Q6ZVD7 989 aa33.34■■■□□ 2.93
CSPG5-205ENST00000610462 USP48Q86UV5 1035 aa33.34■■■□□ 2.93
CSPG5-205ENST00000610462 ZNF512BQ96KM6 892 aaPredicted RBP33.34■■■□□ 2.93
CSPG5-205ENST00000610462 COL5A3P25940 1745 aaPredicted RBP33.34■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms