RNA–Protein interactions for RNA: ENST00000602319.1

HCG18-242, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 3,342 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-242ENST00000602319 KRT32Q14532 448 aa11.58□□□□□ -0.55
HCG18-242ENST00000602319 BRF1Q92994 677 aa11.58□□□□□ -0.55
HCG18-242ENST00000602319 TMX1Q9H3N1 280 aa11.58□□□□□ -0.55
HCG18-242ENST00000602319 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.58□□□□□ -0.55
HCG18-242ENST00000602319 V9GYY5 206 aaPredicted RBP11.58□□□□□ -0.55
HCG18-242ENST00000602319 EIF4A1P60842 406 aaKnown RBP11.58□□□□□ -0.56
HCG18-242ENST00000602319 NFATC2IPQ8NCF5 419 aa11.58□□□□□ -0.56
HCG18-242ENST00000602319 AGXT2Q9BYV1 514 aa11.58□□□□□ -0.56
HCG18-242ENST00000602319 NAP1L2Q9ULW6 460 aaPredicted RBP11.58□□□□□ -0.56
HCG18-242ENST00000602319 C5P01031 1676 aa11.58□□□□□ -0.56
HCG18-242ENST00000602319 NFAT5O94916 1531 aa11.58□□□□□ -0.56
HCG18-242ENST00000602319 JAK2O60674 1132 aa11.58□□□□□ -0.56
HCG18-242ENST00000602319 FILIP1Q7Z7B0 1213 aa11.58□□□□□ -0.56
HCG18-242ENST00000602319 CCAR1Q8IX12 1150 aaKnown RBP11.58□□□□□ -0.56
HCG18-242ENST00000602319 PFKFB2O60825 505 aa11.57□□□□□ -0.56
HCG18-242ENST00000602319 TADA3O75528 432 aa11.57□□□□□ -0.56
HCG18-242ENST00000602319 TAF5LO75529 589 aa11.57□□□□□ -0.56
HCG18-242ENST00000602319 HNRNPH2P55795 449 aaKnown RBP11.57□□□□□ -0.56
HCG18-242ENST00000602319 ERCC6LQ2NKX8 1250 aa11.57□□□□□ -0.56
HCG18-242ENST00000602319 TRIM65Q6PJ69 517 aa11.57□□□□□ -0.56
HCG18-242ENST00000602319 FMR1NBQ8N0W7 255 aaPredicted RBP11.57□□□□□ -0.56
HCG18-242ENST00000602319 SRRTQ9BXP5 876 aaKnown RBP11.57□□□□□ -0.56
HCG18-242ENST00000602319 FEZ2Q9UHY8 353 aaPredicted RBP11.57□□□□□ -0.56
HCG18-242ENST00000602319 SASH1O94885 1247 aa11.57□□□□□ -0.56
HCG18-242ENST00000602319 ILDR1Q86SU0 546 aaPredicted RBP11.57□□□□□ -0.56
HCG18-242ENST00000602319 PARP4Q9UKK3 1724 aaKnown RBP11.57□□□□□ -0.56
HCG18-242ENST00000602319 NWD2Q9ULI1 1742 aa11.57□□□□□ -0.56
HCG18-242ENST00000602319 A0A1W2PQ27 194 aa11.57□□□□□ -0.56
HCG18-242ENST00000602319 A0A1W2PQ64 194 aa11.57□□□□□ -0.56
HCG18-242ENST00000602319 A0A1W2PQD8 194 aa11.57□□□□□ -0.56
HCG18-242ENST00000602319 CEP57L1Q8IYX8 460 aa11.57□□□□□ -0.56
HCG18-242ENST00000602319 CHMP4AQ9BY43 222 aa11.57□□□□□ -0.56
HCG18-242ENST00000602319 FANCGO15287 622 aa11.56□□□□□ -0.56
HCG18-242ENST00000602319 CCDC158Q5M9N0 1113 aa11.56□□□□□ -0.56
HCG18-242ENST00000602319 FCHSD1Q86WN1 690 aa11.56□□□□□ -0.56
HCG18-242ENST00000602319 IQUBQ8NA54 791 aa11.56□□□□□ -0.56
HCG18-242ENST00000602319 PSD3Q9NYI0 1048 aa11.56□□□□□ -0.56
HCG18-242ENST00000602319 STAG3Q9UJ98 1225 aa11.56□□□□□ -0.56
HCG18-242ENST00000602319 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.56□□□□□ -0.56
HCG18-242ENST00000602319 PLEKHG1Q9ULL1 1385 aa11.56□□□□□ -0.56
HCG18-242ENST00000602319 CCP110O43303 1012 aa11.56□□□□□ -0.56
HCG18-242ENST00000602319 PSME1Q06323 249 aa11.56□□□□□ -0.56
HCG18-242ENST00000602319 TXLNBQ8N3L3 684 aa11.56□□□□□ -0.56
HCG18-242ENST00000602319 NAT10Q9H0A0 1025 aaKnown RBP11.56□□□□□ -0.56
HCG18-242ENST00000602319 TRMT1Q9NXH9 659 aaKnown RBP11.56□□□□□ -0.56
HCG18-242ENST00000602319 CTDNEP1O95476 244 aa11.55□□□□□ -0.56
HCG18-242ENST00000602319 IFIT2P09913 472 aaKnown RBP11.55□□□□□ -0.56
HCG18-242ENST00000602319 PDE4CQ08493 712 aa11.55□□□□□ -0.56
HCG18-242ENST00000602319 RAD51AP2Q09MP3 1159 aa11.55□□□□□ -0.56
HCG18-242ENST00000602319 NCAPHQ15003 741 aa11.55□□□□□ -0.56
HCG18-242ENST00000602319 ZNF589Q86UQ0 364 aaPredicted RBP11.55□□□□□ -0.56
HCG18-242ENST00000602319 AOPEPQ8N6M6 819 aa11.55□□□□□ -0.56
HCG18-242ENST00000602319 RGS22Q8NE09 1264 aa11.55□□□□□ -0.56
HCG18-242ENST00000602319 NSUN7Q8NE18 718 aaKnown RBP11.55□□□□□ -0.56
HCG18-242ENST00000602319 NECTIN2Q92692 538 aa11.55□□□□□ -0.56
HCG18-242ENST00000602319 ANKARQ7Z5J8 1434 aa11.55□□□□□ -0.56
HCG18-242ENST00000602319 EFCAB8A8MWE9 144 aa11.55□□□□□ -0.56
HCG18-242ENST00000602319 TPM1P09493 284 aa11.55□□□□□ -0.56
HCG18-242ENST00000602319 SCRN1Q12765 414 aa11.55□□□□□ -0.56
HCG18-242ENST00000602319 DDX54Q8TDD1 881 aaKnown RBP11.55□□□□□ -0.56
HCG18-242ENST00000602319 DNAI1Q9UI46 699 aa11.55□□□□□ -0.56
HCG18-242ENST00000602319 ZNF609O15014 1411 aa11.55□□□□□ -0.56
HCG18-242ENST00000602319 SLIT3O75094 1523 aa11.55□□□□□ -0.56
HCG18-242ENST00000602319 NUTM2FA1L443 756 aa11.55□□□□□ -0.56
HCG18-242ENST00000602319 ETF1P62495 437 aaKnown RBP11.55□□□□□ -0.56
HCG18-242ENST00000602319 NUTM2GQ5VZR2 741 aa11.55□□□□□ -0.56
HCG18-242ENST00000602319 EAF2Q96CJ1 260 aaPredicted RBP11.55□□□□□ -0.56
HCG18-242ENST00000602319 KAZALD1Q96I82 304 aa11.55□□□□□ -0.56
HCG18-242ENST00000602319 HSD3B7Q9H2F3 369 aa11.55□□□□□ -0.56
HCG18-242ENST00000602319 DNAJC5Q9H3Z4 198 aa11.55□□□□□ -0.56
HCG18-242ENST00000602319 TMEM2Q9UHN6 1383 aa11.55□□□□□ -0.56
HCG18-242ENST00000602319 AFDNP55196 1824 aaKnown RBP11.54□□□□□ -0.56
HCG18-242ENST00000602319 HOXC9P31274 260 aa11.54□□□□□ -0.56
HCG18-242ENST00000602319 TPM4P67936 248 aa11.54□□□□□ -0.56
HCG18-242ENST00000602319 SYT10Q6XYQ8 523 aa11.54□□□□□ -0.56
HCG18-242ENST00000602319 AACSQ86V21 672 aa11.54□□□□□ -0.56
HCG18-242ENST00000602319 TICAM2Q86XR7 235 aa11.54□□□□□ -0.56
HCG18-242ENST00000602319 FBXL16Q8N461 479 aa11.54□□□□□ -0.56
HCG18-242ENST00000602319 CHPF2Q9P2E5 772 aa11.54□□□□□ -0.56
HCG18-242ENST00000602319 PI4KAP2A4QPH2 592 aa11.54□□□□□ -0.56
HCG18-242ENST00000602319 TBC1D8O95759 1140 aa11.54□□□□□ -0.56
HCG18-242ENST00000602319 ARHGAP29Q52LW3 1261 aa11.54□□□□□ -0.56
HCG18-242ENST00000602319 REXO1L1PQ8IX06 675 aa11.54□□□□□ -0.56
HCG18-242ENST00000602319 MSL3Q8N5Y2 521 aaKnown RBP11.54□□□□□ -0.56
HCG18-242ENST00000602319 PI4KAP1Q8N8J0 262 aa11.54□□□□□ -0.56
HCG18-242ENST00000602319 ATG3Q9NT62 314 aa11.54□□□□□ -0.56
HCG18-242ENST00000602319 PARP3Q9Y6F1 533 aa11.54□□□□□ -0.56
HCG18-242ENST00000602319 ERICH4A6NGS2 130 aa11.53□□□□□ -0.56
HCG18-242ENST00000602319 BECN2A8MW95 431 aa11.53□□□□□ -0.56
HCG18-242ENST00000602319 IKBKBO14920 756 aa11.53□□□□□ -0.56
HCG18-242ENST00000602319 NEK1Q96PY6 1258 aa11.53□□□□□ -0.56
HCG18-242ENST00000602319 USP28Q96RU2 1077 aa11.53□□□□□ -0.56
HCG18-242ENST00000602319 RTEL1Q9NZ71 1219 aa11.53□□□□□ -0.56
HCG18-242ENST00000602319 HDAC5Q9UQL6 1122 aa11.53□□□□□ -0.56
HCG18-242ENST00000602319 CCDC73Q6ZRK6 1079 aa11.53□□□□□ -0.56
HCG18-242ENST00000602319 RSRC2Q7L4I2 434 aaKnown RBP11.53□□□□□ -0.56
HCG18-242ENST00000602319 ZNF396Q96N95 335 aaPredicted RBP11.53□□□□□ -0.56
HCG18-242ENST00000602319 XPO4Q9C0E2 1151 aaKnown RBP11.53□□□□□ -0.56
HCG18-242ENST00000602319 ARGLU1Q9NWB6 273 aaPredicted RBP11.53□□□□□ -0.56
HCG18-242ENST00000602319 KINO60870 393 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms