RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 LINS1Q8NG48 757 aa16.64■□□□□ 0.25
SYMPK-215ENST00000600237 PANK2Q9BZ23 570 aa16.64■□□□□ 0.25
SYMPK-215ENST00000600237 CFAP43Q8NDM7 1665 aa16.64■□□□□ 0.25
SYMPK-215ENST00000600237 MAP2K1Q02750 393 aaPredicted RBP16.64■□□□□ 0.25
SYMPK-215ENST00000600237 TRIM21P19474 475 aaKnown RBP16.64■□□□□ 0.25
SYMPK-215ENST00000600237 COPS6Q7L5N1 327 aa16.64■□□□□ 0.25
SYMPK-215ENST00000600237 CCDC186Q7Z3E2 898 aa16.64■□□□□ 0.25
SYMPK-215ENST00000600237 TAOK3Q9H2K8 898 aa16.64■□□□□ 0.25
SYMPK-215ENST00000600237 ZNF219Q9P2Y4 722 aaPredicted RBP16.64■□□□□ 0.25
SYMPK-215ENST00000600237 UHRF1BP1Q6BDS2 1440 aa16.64■□□□□ 0.25
SYMPK-215ENST00000600237 RLBP1P12271 317 aa16.64■□□□□ 0.25
SYMPK-215ENST00000600237 CEP85Q6P2H3 762 aa16.64■□□□□ 0.25
SYMPK-215ENST00000600237 SOS1Q07889 1333 aaPredicted RBP16.63■□□□□ 0.25
SYMPK-215ENST00000600237 CCDC91Q7Z6B0 441 aa16.63■□□□□ 0.25
SYMPK-215ENST00000600237 CCDC144CPQ8IYA2 1237 aa16.63■□□□□ 0.25
SYMPK-215ENST00000600237 ALG1Q9BT22 464 aa16.63■□□□□ 0.25
SYMPK-215ENST00000600237 GCOM1H8Y6P7 765 aaPredicted RBP16.63■□□□□ 0.25
SYMPK-215ENST00000600237 MYZAPP0CAP1 466 aa16.63■□□□□ 0.25
SYMPK-215ENST00000600237 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.63■□□□□ 0.256e-7■■■■□ 19.7
SYMPK-215ENST00000600237 MTHFSDQ2M296 383 aaKnown RBP16.63■□□□□ 0.25
SYMPK-215ENST00000600237 CEP170Q5SW79 1584 aa16.63■□□□□ 0.25
SYMPK-215ENST00000600237 STXBP4Q6ZWJ1 553 aa16.63■□□□□ 0.25
SYMPK-215ENST00000600237 PRDM10Q9NQV6 1147 aa16.63■□□□□ 0.25
SYMPK-215ENST00000600237 GSTTP1A0A1W2PQM5 241 aa16.63■□□□□ 0.25
SYMPK-215ENST00000600237 SPECC1Q5M775 1068 aa16.63■□□□□ 0.25
SYMPK-215ENST00000600237 DNAI2Q9GZS0 605 aa16.63■□□□□ 0.25
SYMPK-215ENST00000600237 ATP7AQ04656 1500 aa16.63■□□□□ 0.25
SYMPK-215ENST00000600237 ARHGEF12Q9NZN5 1544 aa16.63■□□□□ 0.25
SYMPK-215ENST00000600237 ESR2Q92731 530 aa16.62■□□□□ 0.25
SYMPK-215ENST00000600237 CCDC113Q9H0I3 377 aa16.62■□□□□ 0.25
SYMPK-215ENST00000600237 ZFYVE9O95405 1425 aa16.62■□□□□ 0.25
SYMPK-215ENST00000600237 SMC1AQ14683 1233 aaKnown RBP16.62■□□□□ 0.25
SYMPK-215ENST00000600237 ATP2B3Q16720 1220 aa16.62■□□□□ 0.25
SYMPK-215ENST00000600237 PPP4R3AQ6IN85 833 aa16.62■□□□□ 0.25
SYMPK-215ENST00000600237 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.62■□□□□ 0.25
SYMPK-215ENST00000600237 LMTK3Q96Q04 1460 aa16.62■□□□□ 0.25
SYMPK-215ENST00000600237 DNM1Q05193 864 aaKnown RBP16.62■□□□□ 0.25
SYMPK-215ENST00000600237 HLTFQ14527 1009 aaKnown RBP eCLIP16.62■□□□□ 0.25
SYMPK-215ENST00000600237 SETDB2Q96T68 719 aa16.62■□□□□ 0.25
SYMPK-215ENST00000600237 CRNKL1Q9BZJ0 848 aaKnown RBP16.62■□□□□ 0.25
SYMPK-215ENST00000600237 RAD50Q92878 1312 aa16.61■□□□□ 0.25
SYMPK-215ENST00000600237 TRIM47Q96LD4 638 aa16.61■□□□□ 0.25
SYMPK-215ENST00000600237 TCEANC2Q96MN5 208 aa16.61■□□□□ 0.25
SYMPK-215ENST00000600237 SRRTQ9BXP5 876 aaKnown RBP16.61■□□□□ 0.25
SYMPK-215ENST00000600237 IP6K1Q92551 441 aa16.61■□□□□ 0.25
SYMPK-215ENST00000600237 ZNF622Q969S3 477 aaKnown RBP eCLIP16.61■□□□□ 0.258e-7■□□□□ 10.5
SYMPK-215ENST00000600237 PBRM1Q86U86 1689 aa16.61■□□□□ 0.25
SYMPK-215ENST00000600237 Q6ZUG5 572 aa16.61■□□□□ 0.25
SYMPK-215ENST00000600237 KRT222Q8N1A0 295 aa16.61■□□□□ 0.25
SYMPK-215ENST00000600237 A0A1W2PP64 1363 aa16.61■□□□□ 0.25
SYMPK-215ENST00000600237 AKR1B10O60218 316 aa16.61■□□□□ 0.25
SYMPK-215ENST00000600237 CKAP4Q07065 602 aaKnown RBP16.61■□□□□ 0.25
SYMPK-215ENST00000600237 DCAF5Q96JK2 942 aa16.61■□□□□ 0.25
SYMPK-215ENST00000600237 PRIM1P49642 420 aaKnown RBP16.6■□□□□ 0.25
SYMPK-215ENST00000600237 ISM2Q6H9L7 571 aa16.6■□□□□ 0.25
SYMPK-215ENST00000600237 CTR9Q6PD62 1173 aa16.6■□□□□ 0.25
SYMPK-215ENST00000600237 PLEKHM2Q8IWE5 1019 aa16.6■□□□□ 0.25
SYMPK-215ENST00000600237 C16orf71Q8IYS4 520 aaPredicted RBP16.6■□□□□ 0.25
SYMPK-215ENST00000600237 CYLC1P35663 651 aaPredicted RBP16.6■□□□□ 0.25
SYMPK-215ENST00000600237 GNAQP50148 359 aa16.6■□□□□ 0.25
SYMPK-215ENST00000600237 DNA2P51530 1060 aa16.6■□□□□ 0.25
SYMPK-215ENST00000600237 LMBR1LQ6UX01 489 aa16.6■□□□□ 0.25
SYMPK-215ENST00000600237 EYA1Q99502 592 aa16.6■□□□□ 0.25
SYMPK-215ENST00000600237 IFI16Q16666 785 aaKnown RBP16.6■□□□□ 0.25
SYMPK-215ENST00000600237 RTN1Q16799 776 aa16.6■□□□□ 0.25
SYMPK-215ENST00000600237 TCERG1LQ5VWI1 586 aa16.6■□□□□ 0.25
SYMPK-215ENST00000600237 WDHD1O75717 1129 aaPredicted RBP16.59■□□□□ 0.25
SYMPK-215ENST00000600237 RAB11FIP4Q86YS3 637 aa16.59■□□□□ 0.25
SYMPK-215ENST00000600237 TMCO5BA8MYB1 307 aa16.59■□□□□ 0.25
SYMPK-215ENST00000600237 HOXC9P31274 260 aa16.59■□□□□ 0.25
SYMPK-215ENST00000600237 TYRO3Q06418 890 aa16.59■□□□□ 0.25
SYMPK-215ENST00000600237 ARFGAP3Q9NP61 516 aa16.59■□□□□ 0.25
SYMPK-215ENST00000600237 JADE2Q9NQC1 790 aa16.59■□□□□ 0.25
SYMPK-215ENST00000600237 PER1O15534 1290 aaPredicted RBP16.59■□□□□ 0.25
SYMPK-215ENST00000600237 GTF2F1P35269 517 aaKnown RBP eCLIP16.59■□□□□ 0.252e-18■■■■■ 74
SYMPK-215ENST00000600237 NFATC2IPQ8NCF5 419 aa16.59■□□□□ 0.25
SYMPK-215ENST00000600237 JARID2Q92833 1246 aaPredicted RBP16.59■□□□□ 0.25
SYMPK-215ENST00000600237 NLRP3Q96P20 1036 aa16.59■□□□□ 0.25
SYMPK-215ENST00000600237 LRRC2Q9BYS8 371 aa16.59■□□□□ 0.25
SYMPK-215ENST00000600237 DNAJC25Q9H1X3 360 aa16.59■□□□□ 0.25
SYMPK-215ENST00000600237 EXOC1Q9NV70 894 aa16.59■□□□□ 0.25
SYMPK-215ENST00000600237 DNMT1P26358 1616 aaKnown RBP16.59■□□□□ 0.25
SYMPK-215ENST00000600237 NPC1L1Q9UHC9 1359 aa16.59■□□□□ 0.25
SYMPK-215ENST00000600237 SPTLC2O15270 562 aa16.58■□□□□ 0.25
SYMPK-215ENST00000600237 ABCA5Q8WWZ7 1642 aa16.58■□□□□ 0.25
SYMPK-215ENST00000600237 MAP3K19Q56UN5 1328 aa16.58■□□□□ 0.24
SYMPK-215ENST00000600237 PPFIA3O75145 1194 aa16.58■□□□□ 0.24
SYMPK-215ENST00000600237 NMIQ13287 307 aaPredicted RBP16.58■□□□□ 0.24
SYMPK-215ENST00000600237 MAP3K5Q99683 1374 aa16.58■□□□□ 0.24
SYMPK-215ENST00000600237 AK2P54819 239 aa16.58■□□□□ 0.24
SYMPK-215ENST00000600237 HOOK3Q86VS8 718 aa16.58■□□□□ 0.24
SYMPK-215ENST00000600237 CCDC175P0C221 793 aa16.58■□□□□ 0.24
SYMPK-215ENST00000600237 AOPEPQ8N6M6 819 aa16.58■□□□□ 0.24
SYMPK-215ENST00000600237 TMX1Q9H3N1 280 aa16.58■□□□□ 0.24
SYMPK-215ENST00000600237 TNNQ9UQP3 1299 aa16.58■□□□□ 0.24
SYMPK-215ENST00000600237 NEO1Q92859 1461 aa16.58■□□□□ 0.24
SYMPK-215ENST00000600237 NEBLO76041 1014 aa16.57■□□□□ 0.24
SYMPK-215ENST00000600237 CHMLP26374 656 aa16.57■□□□□ 0.24
SYMPK-215ENST00000600237 RRAGBQ5VZM2 374 aa16.57■□□□□ 0.24
SYMPK-215ENST00000600237 TSPYL6Q8N831 410 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms