RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 GOLPH3LQ9H4A5 285 aa18.17■□□□□ 0.5
IRF3-219ENST00000597636 CALCOCO1Q9P1Z2 691 aa18.17■□□□□ 0.5
IRF3-219ENST00000597636 NPHP1O15259 732 aa18.17■□□□□ 0.5
IRF3-219ENST00000597636 SASH1O94885 1247 aa18.17■□□□□ 0.5
IRF3-219ENST00000597636 ANXA1P04083 346 aa18.17■□□□□ 0.5
IRF3-219ENST00000597636 IRX5P78411 483 aaPredicted RBP18.17■□□□□ 0.5
IRF3-219ENST00000597636 ZNF589Q86UQ0 364 aaPredicted RBP18.17■□□□□ 0.5
IRF3-219ENST00000597636 CCDC8Q9H0W5 538 aaPredicted RBP18.17■□□□□ 0.5
IRF3-219ENST00000597636 JCADQ9P266 1359 aa18.17■□□□□ 0.5
IRF3-219ENST00000597636 ERICH4A6NGS2 130 aa18.16■□□□□ 0.5
IRF3-219ENST00000597636 KRT32Q14532 448 aa18.16■□□□□ 0.5
IRF3-219ENST00000597636 CCDC73Q6ZRK6 1079 aa18.16■□□□□ 0.5
IRF3-219ENST00000597636 USHBP1Q8N6Y0 703 aa18.16■□□□□ 0.5
IRF3-219ENST00000597636 CABLES1Q8TDN4 633 aa18.16■□□□□ 0.5
IRF3-219ENST00000597636 BOLA2Q9H3K6 86 aa18.16■□□□□ 0.5
IRF3-219ENST00000597636 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.16■□□□□ 0.5
IRF3-219ENST00000597636 KINO60870 393 aaKnown RBP18.16■□□□□ 0.5
IRF3-219ENST00000597636 ALDH1L1O75891 902 aa18.16■□□□□ 0.5
IRF3-219ENST00000597636 ERCC6LQ2NKX8 1250 aa18.16■□□□□ 0.5
IRF3-219ENST00000597636 CEP57L1Q8IYX8 460 aa18.16■□□□□ 0.5
IRF3-219ENST00000597636 IMPACTQ9P2X3 320 aa18.16■□□□□ 0.5
IRF3-219ENST00000597636 A0A087WWV3 80 aa18.16■□□□□ 0.5
IRF3-219ENST00000597636 TAF5LO75529 589 aa18.16■□□□□ 0.5
IRF3-219ENST00000597636 HOXC9P31274 260 aa18.16■□□□□ 0.5
IRF3-219ENST00000597636 USPL1Q5W0Q7 1092 aa18.16■□□□□ 0.5
IRF3-219ENST00000597636 E4F1Q66K89 784 aaPredicted RBP18.16■□□□□ 0.5
IRF3-219ENST00000597636 ENGASEQ8NFI3 743 aa18.16■□□□□ 0.5
IRF3-219ENST00000597636 NOL10Q9BSC4 688 aaKnown RBP18.16■□□□□ 0.5
IRF3-219ENST00000597636 HDAC5Q9UQL6 1122 aa18.16■□□□□ 0.5
IRF3-219ENST00000597636 LMTK3Q96Q04 1460 aa18.16■□□□□ 0.5
IRF3-219ENST00000597636 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.15■□□□□ 0.5
IRF3-219ENST00000597636 KRT28Q7Z3Y7 464 aa18.15■□□□□ 0.5
IRF3-219ENST00000597636 NBPF11Q86T75 865 aa18.15■□□□□ 0.5
IRF3-219ENST00000597636 AOPEPQ8N6M6 819 aa18.15■□□□□ 0.5
IRF3-219ENST00000597636 NEK1Q96PY6 1258 aa18.15■□□□□ 0.5
IRF3-219ENST00000597636 CEMIPQ8WUJ3 1361 aa18.15■□□□□ 0.5
IRF3-219ENST00000597636 CCDC93Q567U6 631 aa18.15■□□□□ 0.5
IRF3-219ENST00000597636 NWD1Q149M9 1564 aa18.14■□□□□ 0.5
IRF3-219ENST00000597636 FAM160A1Q05DH4 1040 aa18.14■□□□□ 0.49
IRF3-219ENST00000597636 G3BP1Q13283 466 aaKnown RBP eCLIP18.14■□□□□ 0.49
IRF3-219ENST00000597636 NAT10Q9H0A0 1025 aaKnown RBP18.14■□□□□ 0.49
IRF3-219ENST00000597636 TLR7Q9NYK1 1049 aaKnown RBP18.14■□□□□ 0.49
IRF3-219ENST00000597636 FHOD1Q9Y613 1164 aa18.14■□□□□ 0.49
IRF3-219ENST00000597636 ZC3H6P61129 1189 aaKnown RBP18.14■□□□□ 0.49
IRF3-219ENST00000597636 Q6ZUG5 572 aa18.14■□□□□ 0.49
IRF3-219ENST00000597636 SMARCC2Q8TAQ2 1214 aa18.14■□□□□ 0.49
IRF3-219ENST00000597636 PPP1R13BQ96KQ4 1090 aa18.14■□□□□ 0.49
IRF3-219ENST00000597636 FTOQ9C0B1 505 aaKnown RBP eCLIP18.14■□□□□ 0.49
IRF3-219ENST00000597636 CYP2C19P33261 490 aa18.13■□□□□ 0.49
IRF3-219ENST00000597636 NAA16Q6N069 864 aaPredicted RBP18.13■□□□□ 0.49
IRF3-219ENST00000597636 MAP3K2Q9Y2U5 619 aa18.13■□□□□ 0.49
IRF3-219ENST00000597636 PSDA5PKW4 1024 aaPredicted RBP18.13■□□□□ 0.49
IRF3-219ENST00000597636 HSP90B1P14625 803 aaKnown RBP18.13■□□□□ 0.49
IRF3-219ENST00000597636 CLCN6P51797 869 aa18.13■□□□□ 0.49
IRF3-219ENST00000597636 SYT10Q6XYQ8 523 aa18.13■□□□□ 0.49
IRF3-219ENST00000597636 LLPHQ9BRT6 129 aaKnown RBP18.13■□□□□ 0.49
IRF3-219ENST00000597636 KCNQ3O43525 872 aa18.12■□□□□ 0.49
IRF3-219ENST00000597636 SCRN1Q12765 414 aa18.12■□□□□ 0.49
IRF3-219ENST00000597636 LRRN4CLQ8ND94 238 aa18.12■□□□□ 0.49
IRF3-219ENST00000597636 USP28Q96RU2 1077 aa18.12■□□□□ 0.49
IRF3-219ENST00000597636 TUBB4AP04350 444 aa18.12■□□□□ 0.49
IRF3-219ENST00000597636 CDK11BP21127 795 aaKnown RBP18.12■□□□□ 0.49
IRF3-219ENST00000597636 ATL3Q6DD88 541 aa18.12■□□□□ 0.49
IRF3-219ENST00000597636 CCDC150Q8NCX0 1101 aa18.12■□□□□ 0.49
IRF3-219ENST00000597636 DBF4Q9UBU7 674 aaPredicted RBP18.12■□□□□ 0.49
IRF3-219ENST00000597636 KCNJ6P48051 423 aa18.11■□□□□ 0.49
IRF3-219ENST00000597636 FSIP1Q8NA03 581 aa18.11■□□□□ 0.49
IRF3-219ENST00000597636 LGR6Q9HBX8 967 aa18.11■□□□□ 0.49
IRF3-219ENST00000597636 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.11■□□□□ 0.493e-7■■■□□ 15.9
IRF3-219ENST00000597636 STRCP1A6NGW2 1772 aa18.11■□□□□ 0.49
IRF3-219ENST00000597636 TULP2O00295 520 aa18.11■□□□□ 0.49
IRF3-219ENST00000597636 PNMA6AP0CW24 399 aaPredicted RBP18.11■□□□□ 0.49
IRF3-219ENST00000597636 CWF19L2Q2TBE0 894 aaKnown RBP18.11■□□□□ 0.49
IRF3-219ENST00000597636 ZNF396Q96N95 335 aaPredicted RBP18.11■□□□□ 0.49
IRF3-219ENST00000597636 ARMCX5Q6P1M9 558 aa18.1■□□□□ 0.49
IRF3-219ENST00000597636 KSR2Q6VAB6 950 aa18.1■□□□□ 0.49
IRF3-219ENST00000597636 ERCC4Q92889 916 aaPredicted RBP18.1■□□□□ 0.49
IRF3-219ENST00000597636 ANKARQ7Z5J8 1434 aa18.1■□□□□ 0.49
IRF3-219ENST00000597636 ARHGAP29Q52LW3 1261 aa18.1■□□□□ 0.49
IRF3-219ENST00000597636 NSUN7Q8NE18 718 aaKnown RBP18.1■□□□□ 0.49
IRF3-219ENST00000597636 KAZALD1Q96I82 304 aa18.1■□□□□ 0.49
IRF3-219ENST00000597636 SUCLG2Q96I99 432 aa18.1■□□□□ 0.49
IRF3-219ENST00000597636 PFKFB2O60825 505 aa18.09■□□□□ 0.49
IRF3-219ENST00000597636 PLA2G4AP47712 749 aa18.09■□□□□ 0.49
IRF3-219ENST00000597636 ME1P48163 572 aa18.09■□□□□ 0.49
IRF3-219ENST00000597636 SYTL4Q96C24 671 aaPredicted RBP18.09■□□□□ 0.49
IRF3-219ENST00000597636 SFPQP23246 707 aaKnown RBP eCLIP18.09■□□□□ 0.49
IRF3-219ENST00000597636 FBXW7Q969H0 707 aa18.09■□□□□ 0.49
IRF3-219ENST00000597636 XPO4Q9C0E2 1151 aaKnown RBP18.09■□□□□ 0.49
IRF3-219ENST00000597636 COL15A1P39059 1388 aa18.09■□□□□ 0.49
IRF3-219ENST00000597636 SLC20A2Q08357 652 aa18.09■□□□□ 0.49
IRF3-219ENST00000597636 TMC6Q7Z403 805 aa18.09■□□□□ 0.49
IRF3-219ENST00000597636 BICC1Q9H694 974 aaKnown RBP18.09■□□□□ 0.49
IRF3-219ENST00000597636 U3KPZ7 1027 aaPredicted RBP18.09■□□□□ 0.49
IRF3-219ENST00000597636 GRM8O00222 908 aa18.08■□□□□ 0.48
IRF3-219ENST00000597636 ZRANB2O95218 330 aaKnown RBP eCLIP18.08■□□□□ 0.48
IRF3-219ENST00000597636 FOSBP53539 338 aa18.08■□□□□ 0.48
IRF3-219ENST00000597636 DHX8Q14562 1220 aaKnown RBP18.08■□□□□ 0.48
IRF3-219ENST00000597636 FMR1NBQ8N0W7 255 aaPredicted RBP18.08■□□□□ 0.48
IRF3-219ENST00000597636 LRRC59Q96AG4 307 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms