RNA–Protein interactions for RNA: ENST00000592776.1

PTPN2-215, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 5

Gene PTPN2, Length 772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-215ENST00000592776 CNTNAP1P78357 1384 aa28.14■■■□□ 2.1
PTPN2-215ENST00000592776 WTIPA6NIX2 430 aaPredicted RBP28.14■■■□□ 2.1
PTPN2-215ENST00000592776 ECE2O60344 883 aa28.14■■■□□ 2.1
PTPN2-215ENST00000592776 UFL1O94874 794 aa28.14■■■□□ 2.1
PTPN2-215ENST00000592776 HSPA1AP0DMV8 641 aaKnown RBP28.14■■■□□ 2.1
PTPN2-215ENST00000592776 HSPA1BP0DMV9 641 aaKnown RBP28.14■■■□□ 2.1
PTPN2-215ENST00000592776 HIRAP54198 1017 aaPredicted RBP28.14■■■□□ 2.1
PTPN2-215ENST00000592776 ANKRD18AQ8IVF6 992 aa28.14■■■□□ 2.1
PTPN2-215ENST00000592776 DNAAF4Q8WXU2 420 aa28.14■■■□□ 2.1
PTPN2-215ENST00000592776 EYA3Q99504 573 aa28.14■■■□□ 2.1
PTPN2-215ENST00000592776 CNOT7Q9UIV1 285 aaKnown RBP28.14■■■□□ 2.1
PTPN2-215ENST00000592776 GCKRQ14397 625 aa28.13■■■□□ 2.09
PTPN2-215ENST00000592776 IFFO2Q5TF58 517 aa28.13■■■□□ 2.09
PTPN2-215ENST00000592776 TRPM4Q8TD43 1214 aa28.13■■■□□ 2.09
PTPN2-215ENST00000592776 F6X3S4 739 aa28.12■■■□□ 2.09
PTPN2-215ENST00000592776 ZC3H12CQ9C0D7 883 aaKnown RBP28.12■■■□□ 2.09
PTPN2-215ENST00000592776 GGA1Q9UJY5 639 aa28.12■■■□□ 2.09
PTPN2-215ENST00000592776 RTL9Q8NET4 1388 aa28.11■■■□□ 2.09
PTPN2-215ENST00000592776 CASP7P55210 303 aa28.11■■■□□ 2.09
PTPN2-215ENST00000592776 PCNTO95613 3336 aa28.1■■■□□ 2.09
PTPN2-215ENST00000592776 VEGFBP49765 207 aa28.1■■■□□ 2.09
PTPN2-215ENST00000592776 COL13A1Q5TAT6 717 aaPredicted RBP28.1■■■□□ 2.09
PTPN2-215ENST00000592776 MICALL2Q8IY33 904 aa28.1■■■□□ 2.09
PTPN2-215ENST00000592776 MYH16Q9H6N6 1097 aa28.1■■■□□ 2.09
PTPN2-215ENST00000592776 CDC5LQ99459 802 aaKnown RBP28.09■■■□□ 2.09
PTPN2-215ENST00000592776 SAMD7Q7Z3H4 446 aa28.08■■■□□ 2.09
PTPN2-215ENST00000592776 LINS1Q8NG48 757 aa28.08■■■□□ 2.09
PTPN2-215ENST00000592776 GLIS2Q9BZE0 524 aaPredicted RBP28.08■■■□□ 2.09
PTPN2-215ENST00000592776 H7C1D1 291 aa28.07■■■□□ 2.08
PTPN2-215ENST00000592776 CST9Q5W186 159 aa28.07■■■□□ 2.08
PTPN2-215ENST00000592776 ABT1Q9ULW3 272 aaKnown RBP28.07■■■□□ 2.08
PTPN2-215ENST00000592776 MINPP1Q9UNW1 487 aa28.07■■■□□ 2.08
PTPN2-215ENST00000592776 ZNF521Q96K83 1311 aa28.07■■■□□ 2.08
PTPN2-215ENST00000592776 EGFRP00533 1210 aa28.06■■■□□ 2.08
PTPN2-215ENST00000592776 DEFB115Q30KQ5 88 aa28.06■■■□□ 2.08
PTPN2-215ENST00000592776 PGAP2Q9UHJ9 254 aa28.06■■■□□ 2.08
PTPN2-215ENST00000592776 XDHP47989 1333 aa28.06■■■□□ 2.08
PTPN2-215ENST00000592776 SPEF2Q9C093 1822 aa28.06■■■□□ 2.08
PTPN2-215ENST00000592776 MYH3P11055 1940 aa28.06■■■□□ 2.08
PTPN2-215ENST00000592776 SCN9AQ15858 1988 aa28.06■■■□□ 2.08
PTPN2-215ENST00000592776 G3V3G9 751 aa28.05■■■□□ 2.08
PTPN2-215ENST00000592776 FAM161AQ3B820 660 aa28.05■■■□□ 2.08
PTPN2-215ENST00000592776 DCAF8Q5TAQ9 597 aa28.05■■■□□ 2.08
PTPN2-215ENST00000592776 DLK2Q6UY11 383 aa28.05■■■□□ 2.08
PTPN2-215ENST00000592776 DPF2Q92785 391 aa28.05■■■□□ 2.08
PTPN2-215ENST00000592776 PLA2G12BQ9BX93 195 aa28.05■■■□□ 2.08
PTPN2-215ENST00000592776 BSDC1Q9NW68 430 aaPredicted RBP28.05■■■□□ 2.08
PTPN2-215ENST00000592776 RASSF10A6NK89 507 aa28.04■■■□□ 2.08
PTPN2-215ENST00000592776 ATP2B4P23634 1241 aa28.04■■■□□ 2.08
PTPN2-215ENST00000592776 TBC1D10BQ4KMP7 808 aaPredicted RBP28.04■■■□□ 2.08
PTPN2-215ENST00000592776 BEND3Q5T5X7 828 aa28.04■■■□□ 2.08
PTPN2-215ENST00000592776 RBM26Q5T8P6 1007 aaKnown RBP28.04■■■□□ 2.08
PTPN2-215ENST00000592776 CACNA1FO60840 1977 aa28.03■■■□□ 2.08
PTPN2-215ENST00000592776 CSF1RP07333 972 aa28.02■■■□□ 2.08
PTPN2-215ENST00000592776 VIL1P09327 827 aaKnown RBP28.02■■■□□ 2.08
PTPN2-215ENST00000592776 ITGA6P23229 1130 aa28.02■■■□□ 2.08
PTPN2-215ENST00000592776 ZC3H15Q8WU90 426 aaKnown RBP28■■■□□ 2.07
PTPN2-215ENST00000592776 CELF2O95319 508 aaKnown RBP27.99■■■□□ 2.07
PTPN2-215ENST00000592776 RPS12P25398 132 aaKnown RBP27.99■■■□□ 2.07
PTPN2-215ENST00000592776 IGHMBP2P38935 993 aaKnown RBP27.99■■■□□ 2.07
PTPN2-215ENST00000592776 CCT4P50991 539 aaKnown RBP27.99■■■□□ 2.07
PTPN2-215ENST00000592776 FOXO4P98177 505 aa27.99■■■□□ 2.07
PTPN2-215ENST00000592776 USP48Q86UV5 1035 aa27.99■■■□□ 2.07
PTPN2-215ENST00000592776 ZNF408Q9H9D4 720 aa27.99■■■□□ 2.07
PTPN2-215ENST00000592776 WDR33Q9C0J8 1336 aaKnown RBP27.98■■■□□ 2.07
PTPN2-215ENST00000592776 TRPM7Q96QT4 1865 aa27.98■■■□□ 2.07
PTPN2-215ENST00000592776 TXNRD3Q86VQ6 643 aa27.98■■■□□ 2.07
PTPN2-215ENST00000592776 FOXN1O15353 648 aa27.97■■■□□ 2.07
PTPN2-215ENST00000592776 GRM1Q13255 1194 aa27.97■■■□□ 2.07
PTPN2-215ENST00000592776 EPHA10Q5JZY3 1008 aa27.97■■■□□ 2.07
PTPN2-215ENST00000592776 CYP4F22Q6NT55 531 aa27.97■■■□□ 2.07
PTPN2-215ENST00000592776 SLC4A10Q6U841 1118 aa27.97■■■□□ 2.07
PTPN2-215ENST00000592776 PAXIP1Q6ZW49 1069 aaPredicted RBP27.97■■■□□ 2.07
PTPN2-215ENST00000592776 CDC37L1Q7L3B6 337 aa27.97■■■□□ 2.07
PTPN2-215ENST00000592776 ASTN2O75129 1339 aaPredicted RBP27.96■■■□□ 2.07
PTPN2-215ENST00000592776 RSBN1LQ6PCB5 846 aaPredicted RBP27.96■■■□□ 2.07
PTPN2-215ENST00000592776 TLL2Q9Y6L7 1015 aa27.96■■■□□ 2.07
PTPN2-215ENST00000592776 KLRK1P26718 216 aa27.95■■■□□ 2.06
PTPN2-215ENST00000592776 MPHOSPH8Q99549 860 aa27.95■■■□□ 2.06
PTPN2-215ENST00000592776 MXD3Q9BW11 206 aa27.95■■■□□ 2.06
PTPN2-215ENST00000592776 CHMP3Q9Y3E7 222 aa27.95■■■□□ 2.06
PTPN2-215ENST00000592776 MED23Q9ULK4 1368 aa27.95■■■□□ 2.06
PTPN2-215ENST00000592776 SNAP23O00161 211 aa27.94■■■□□ 2.06
PTPN2-215ENST00000592776 KIF4BQ2VIQ3 1234 aa27.94■■■□□ 2.06
PTPN2-215ENST00000592776 CAPNS2Q96L46 248 aa27.94■■■□□ 2.06
PTPN2-215ENST00000592776 ANKRD18BA2A2Z9 1011 aa27.93■■■□□ 2.06
PTPN2-215ENST00000592776 USP17L3A6NCW0 530 aa27.93■■■□□ 2.06
PTPN2-215ENST00000592776 USP17L4A6NCW7 530 aa27.93■■■□□ 2.06
PTPN2-215ENST00000592776 USP17L1Q7RTZ2 530 aa27.93■■■□□ 2.06
PTPN2-215ENST00000592776 PODNQ7Z5L7 613 aa27.93■■■□□ 2.06
PTPN2-215ENST00000592776 MRPL50Q8N5N7 158 aaKnown RBP27.93■■■□□ 2.06
PTPN2-215ENST00000592776 CDCA7LQ96GN5 454 aa27.93■■■□□ 2.06
PTPN2-215ENST00000592776 GMLQ99445 158 aa27.93■■■□□ 2.06
PTPN2-215ENST00000592776 ADM5C9JUS6 153 aa27.92■■■□□ 2.06
PTPN2-215ENST00000592776 GRM8O00222 908 aa27.92■■■□□ 2.06
PTPN2-215ENST00000592776 CHRNDQ07001 517 aa27.92■■■□□ 2.06
PTPN2-215ENST00000592776 LMBR1LQ6UX01 489 aa27.92■■■□□ 2.06
PTPN2-215ENST00000592776 HELBQ8NG08 1087 aaPredicted RBP27.92■■■□□ 2.06
PTPN2-215ENST00000592776 WBP1LQ9NX94 342 aa27.92■■■□□ 2.06
PTPN2-215ENST00000592776 LEMD3Q9Y2U8 911 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms