RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 SYNE4Q8N205 404 aa31.3■■■□□ 2.6
RUNDC3A-206ENST00000590941 LINC00116Q8NCU8 138 aa31.3■■■□□ 2.6
RUNDC3A-206ENST00000590941 FOXD4L1Q9NU39 408 aa31.3■■■□□ 2.6
RUNDC3A-206ENST00000590941 TRPC5Q9UL62 973 aaPredicted RBP31.3■■■□□ 2.6
RUNDC3A-206ENST00000590941 NIP7Q9Y221 180 aaKnown RBP eCLIP31.3■■■□□ 2.6
RUNDC3A-206ENST00000590941 PRPF40BQ6NWY9 871 aaKnown RBP31.29■■■□□ 2.6
RUNDC3A-206ENST00000590941 XAGE2Q96GT9 111 aa31.29■■■□□ 2.6
RUNDC3A-206ENST00000590941 ZNF512BQ96KM6 892 aaPredicted RBP31.29■■■□□ 2.6
RUNDC3A-206ENST00000590941 ONECUT3O60422 494 aaPredicted RBP31.29■■■□□ 2.6
RUNDC3A-206ENST00000590941 CCDC152Q4G0S7 254 aa31.29■■■□□ 2.6
RUNDC3A-206ENST00000590941 CLEC17AQ6ZS10 378 aa31.29■■■□□ 2.6
RUNDC3A-206ENST00000590941 TNPO1Q92973 898 aaKnown RBP31.29■■■□□ 2.6
RUNDC3A-206ENST00000590941 CCDC85AQ96PX6 553 aaPredicted RBP31.29■■■□□ 2.6
RUNDC3A-206ENST00000590941 UPF3BQ9BZI7 483 aaKnown RBP31.29■■■□□ 2.6
RUNDC3A-206ENST00000590941 AFF2P51816 1311 aa31.28■■■□□ 2.6
RUNDC3A-206ENST00000590941 CREB3L3Q68CJ9 461 aa31.28■■■□□ 2.6
RUNDC3A-206ENST00000590941 DDX46Q7L014 1031 aaKnown RBP31.28■■■□□ 2.6
RUNDC3A-206ENST00000590941 RASEFQ8IZ41 740 aa31.28■■■□□ 2.6
RUNDC3A-206ENST00000590941 EDC3Q96F86 508 aaKnown RBP31.28■■■□□ 2.6
RUNDC3A-206ENST00000590941 DDX60Q8IY21 1712 aaKnown RBP31.28■■■□□ 2.6
RUNDC3A-206ENST00000590941 NTSR2O95665 410 aa31.27■■■□□ 2.6
RUNDC3A-206ENST00000590941 TTC14Q96N46 770 aa31.27■■■□□ 2.6
RUNDC3A-206ENST00000590941 U3KPZ7 1027 aaPredicted RBP31.27■■■□□ 2.6
RUNDC3A-206ENST00000590941 GOLIM4O00461 696 aa31.26■■■□□ 2.6
RUNDC3A-206ENST00000590941 TAF5LO75529 589 aa31.26■■■□□ 2.6
RUNDC3A-206ENST00000590941 ZFYP08048 801 aaPredicted RBP31.26■■■□□ 2.6
RUNDC3A-206ENST00000590941 HSPA1LP34931 641 aa31.26■■■□□ 2.6
RUNDC3A-206ENST00000590941 KRT32Q14532 448 aa31.26■■■□□ 2.6
RUNDC3A-206ENST00000590941 TSGA10IPQ3SY00 556 aa31.26■■■□□ 2.6
RUNDC3A-206ENST00000590941 VPS53Q5VIR6 699 aa31.26■■■□□ 2.6
RUNDC3A-206ENST00000590941 USPL1Q5W0Q7 1092 aa31.26■■■□□ 2.6
RUNDC3A-206ENST00000590941 ZSWIM6Q9HCJ5 1215 aa31.26■■■□□ 2.6
RUNDC3A-206ENST00000590941 CYP46A1Q9Y6A2 500 aa31.26■■■□□ 2.6
RUNDC3A-206ENST00000590941 SSFA2P28290 1259 aa31.25■■■□□ 2.59
RUNDC3A-206ENST00000590941 LY75O60449 1722 aa31.25■■■□□ 2.59
RUNDC3A-206ENST00000590941 ARAP2Q8WZ64 1704 aa31.25■■■□□ 2.59
RUNDC3A-206ENST00000590941 SLC27A2O14975 620 aa31.24■■■□□ 2.59
RUNDC3A-206ENST00000590941 RPS6KA4O75676 772 aa31.24■■■□□ 2.59
RUNDC3A-206ENST00000590941 PDE8BO95263 885 aa31.24■■■□□ 2.59
RUNDC3A-206ENST00000590941 CASTP20810 708 aaKnown RBP31.24■■■□□ 2.59
RUNDC3A-206ENST00000590941 VGLL2Q8N8G2 317 aa31.24■■■□□ 2.59
RUNDC3A-206ENST00000590941 RPAP1Q9BWH6 1393 aaPredicted RBP31.23■■■□□ 2.59
RUNDC3A-206ENST00000590941 DEKP35659 375 aaKnown RBP31.23■■■□□ 2.59
RUNDC3A-206ENST00000590941 JAKMIP1Q96N16 626 aaKnown RBP31.23■■■□□ 2.59
RUNDC3A-206ENST00000590941 LIMCH1Q9UPQ0 1083 aa31.23■■■□□ 2.59
RUNDC3A-206ENST00000590941 GOLGA6L22H0YM25 854 aa31.22■■■□□ 2.59
RUNDC3A-206ENST00000590941 GSE1Q14687 1217 aa31.22■■■□□ 2.59
RUNDC3A-206ENST00000590941 ZMYM1Q5SVZ6 1142 aa31.22■■■□□ 2.59
RUNDC3A-206ENST00000590941 ZNF589Q86UQ0 364 aaPredicted RBP31.22■■■□□ 2.59
RUNDC3A-206ENST00000590941 ZSCAN31Q96LW9 406 aaPredicted RBP31.22■■■□□ 2.59
RUNDC3A-206ENST00000590941 RNF113AO15541 343 aaKnown RBP31.22■■■□□ 2.59
RUNDC3A-206ENST00000590941 CYP2E1P05181 493 aaPredicted RBP31.22■■■□□ 2.59
RUNDC3A-206ENST00000590941 PUM3Q15397 648 aaKnown RBP31.22■■■□□ 2.59
RUNDC3A-206ENST00000590941 RUFY3Q7L099 469 aa31.22■■■□□ 2.59
RUNDC3A-206ENST00000590941 SBF2Q86WG5 1849 aa31.21■■■□□ 2.59
RUNDC3A-206ENST00000590941 UQCRFS1P1P0C7P4 283 aa31.2■■■□□ 2.59
RUNDC3A-206ENST00000590941 LPIN2Q92539 896 aa31.2■■■□□ 2.59
RUNDC3A-206ENST00000590941 MPHOSPH8Q99549 860 aa31.2■■■□□ 2.59
RUNDC3A-206ENST00000590941 DSCC1Q9BVC3 393 aa31.2■■■□□ 2.59
RUNDC3A-206ENST00000590941 SH2B1Q9NRF2 756 aaPredicted RBP31.2■■■□□ 2.59
RUNDC3A-206ENST00000590941 PDRG1Q9NUG6 133 aa31.2■■■□□ 2.59
RUNDC3A-206ENST00000590941 HCLS1P14317 486 aaPredicted RBP31.19■■■□□ 2.58
RUNDC3A-206ENST00000590941 IGHMBP2P38935 993 aaKnown RBP31.19■■■□□ 2.58
RUNDC3A-206ENST00000590941 ANKRD1Q15327 319 aa31.19■■■□□ 2.58
RUNDC3A-206ENST00000590941 TTF1Q15361 905 aaPredicted RBP31.19■■■□□ 2.58
RUNDC3A-206ENST00000590941 ALDH8A1Q9H2A2 487 aaPredicted RBP31.19■■■□□ 2.58
RUNDC3A-206ENST00000590941 NARFQ9UHQ1 456 aa31.19■■■□□ 2.58
RUNDC3A-206ENST00000590941 CCNL1Q9UK58 526 aaPredicted RBP31.19■■■□□ 2.58
RUNDC3A-206ENST00000590941 ADORA1P30542 326 aa31.19■■■□□ 2.58
RUNDC3A-206ENST00000590941 AK2P54819 239 aa31.19■■■□□ 2.58
RUNDC3A-206ENST00000590941 ZSCAN25Q6NSZ9 544 aa31.19■■■□□ 2.58
RUNDC3A-206ENST00000590941 NYXQ9GZU5 481 aa31.19■■■□□ 2.58
RUNDC3A-206ENST00000590941 NDUFB9Q9Y6M9 179 aa31.19■■■□□ 2.58
RUNDC3A-206ENST00000590941 ZGPATQ8N5A5 531 aaKnown RBP31.18■■■□□ 2.58
RUNDC3A-206ENST00000590941 CDC5LQ99459 802 aaKnown RBP31.18■■■□□ 2.58
RUNDC3A-206ENST00000590941 SLC5A1P13866 664 aa31.17■■■□□ 2.58
RUNDC3A-206ENST00000590941 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.17■■■□□ 2.58
RUNDC3A-206ENST00000590941 ZSCAN21Q9Y5A6 473 aaPredicted RBP31.17■■■□□ 2.58
RUNDC3A-206ENST00000590941 HMGB2P26583 209 aaKnown RBP31.16■■■□□ 2.58
RUNDC3A-206ENST00000590941 FKBP4Q02790 459 aaKnown RBP eCLIP31.16■■■□□ 2.58
RUNDC3A-206ENST00000590941 SKOR2Q2VWA4 1001 aaPredicted RBP31.16■■■□□ 2.58
RUNDC3A-206ENST00000590941 BLOC1S2Q6QNY1 142 aa31.16■■■□□ 2.58
RUNDC3A-206ENST00000590941 TAF1LQ8IZX4 1826 aa31.16■■■□□ 2.58
RUNDC3A-206ENST00000590941 RTCBQ9Y3I0 505 aaKnown RBP31.16■■■□□ 2.58
RUNDC3A-206ENST00000590941 COL24A1Q17RW2 1714 aa31.15■■■□□ 2.58
RUNDC3A-206ENST00000590941 FGFR2P21802 821 aa31.15■■■□□ 2.58
RUNDC3A-206ENST00000590941 FAM177BA6PVY3 158 aa31.14■■■□□ 2.58
RUNDC3A-206ENST00000590941 ARID4AP29374 1257 aaPredicted RBP31.14■■■□□ 2.58
RUNDC3A-206ENST00000590941 ADCK5Q3MIX3 580 aa31.14■■■□□ 2.58
RUNDC3A-206ENST00000590941 SF3B3Q15393 1217 aaKnown RBP31.13■■■□□ 2.57
RUNDC3A-206ENST00000590941 SEPT12Q8IYM1 358 aa31.13■■■□□ 2.57
RUNDC3A-206ENST00000590941 ZPR1O75312 459 aa31.13■■■□□ 2.57
RUNDC3A-206ENST00000590941 SLC10A5Q5PT55 438 aa31.13■■■□□ 2.57
RUNDC3A-206ENST00000590941 NOL8Q76FK4 1167 aaKnown RBP31.13■■■□□ 2.57
RUNDC3A-206ENST00000590941 BCL11BQ9C0K0 894 aaPredicted RBP31.13■■■□□ 2.57
RUNDC3A-206ENST00000590941 MYH7P12883 1935 aa31.12■■■□□ 2.57
RUNDC3A-206ENST00000590941 HMGB1P09429 215 aaKnown RBP31.12■■■□□ 2.57
RUNDC3A-206ENST00000590941 GNPATO15228 680 aa31.11■■■□□ 2.57
RUNDC3A-206ENST00000590941 APPBP2Q92624 585 aa31.11■■■□□ 2.57
RUNDC3A-206ENST00000590941 PDIA4P13667 645 aaKnown RBP31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms