RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 GCKRQ14397 625 aa27.19■■□□□ 1.94
R3HDM4-206ENST00000590454 ARHGAP45Q92619 1136 aa27.19■■□□□ 1.94
R3HDM4-206ENST00000590454 TMX4Q9H1E5 349 aaPredicted RBP27.19■■□□□ 1.94
R3HDM4-206ENST00000590454 THSD7BQ9C0I4 1608 aa27.19■■□□□ 1.94
R3HDM4-206ENST00000590454 SH3TC1Q8TE82 1336 aa27.18■■□□□ 1.94
R3HDM4-206ENST00000590454 RGS19P49795 217 aa27.18■■□□□ 1.94
R3HDM4-206ENST00000590454 API5Q9BZZ5 524 aaKnown RBP27.18■■□□□ 1.94
R3HDM4-206ENST00000590454 VPS33BQ9H267 617 aa27.18■■□□□ 1.94
R3HDM4-206ENST00000590454 ADARB2Q9NS39 739 aaKnown RBP27.18■■□□□ 1.94
R3HDM4-206ENST00000590454 PPIP5K2O43314 1243 aa27.17■■□□□ 1.94
R3HDM4-206ENST00000590454 ATF7IPQ6VMQ6 1270 aa27.17■■□□□ 1.94
R3HDM4-206ENST00000590454 ZBTB38Q8NAP3 1195 aaPredicted RBP27.17■■□□□ 1.94
R3HDM4-206ENST00000590454 DDX60Q8IY21 1712 aaKnown RBP27.16■■□□□ 1.94
R3HDM4-206ENST00000590454 PCCAP05165 728 aaPredicted RBP27.16■■□□□ 1.94
R3HDM4-206ENST00000590454 SLC10A5Q5PT55 438 aa27.16■■□□□ 1.94
R3HDM4-206ENST00000590454 CLUAP1Q96AJ1 413 aa27.16■■□□□ 1.94
R3HDM4-206ENST00000590454 SRCIN1Q9C0H9 1055 aa27.16■■□□□ 1.94
R3HDM4-206ENST00000590454 GPRC5DQ9NZD1 345 aa27.16■■□□□ 1.94
R3HDM4-206ENST00000590454 IPO8O15397 1037 aaKnown RBP27.15■■□□□ 1.94
R3HDM4-206ENST00000590454 AOC2O75106 756 aa27.15■■□□□ 1.94
R3HDM4-206ENST00000590454 ZKSCAN2Q63HK3 967 aa27.15■■□□□ 1.94
R3HDM4-206ENST00000590454 ABCC4O15439 1325 aa27.15■■□□□ 1.94
R3HDM4-206ENST00000590454 H7C1W4 665 aa27.14■■□□□ 1.94
R3HDM4-206ENST00000590454 CA12O43570 354 aa27.14■■□□□ 1.94
R3HDM4-206ENST00000590454 PLIN1O60240 522 aa27.14■■□□□ 1.94
R3HDM4-206ENST00000590454 ALDH1L1O75891 902 aa27.14■■□□□ 1.94
R3HDM4-206ENST00000590454 SAPCD2Q86UD0 394 aa27.14■■□□□ 1.94
R3HDM4-206ENST00000590454 TSKSQ9UJT2 592 aa27.14■■□□□ 1.94
R3HDM4-206ENST00000590454 LAMB2P55268 1798 aa27.13■■□□□ 1.93
R3HDM4-206ENST00000590454 CASP7P55210 303 aa27.13■■□□□ 1.93
R3HDM4-206ENST00000590454 AOC3Q16853 763 aa27.13■■□□□ 1.93
R3HDM4-206ENST00000590454 UBE3BQ7Z3V4 1068 aa27.13■■□□□ 1.93
R3HDM4-206ENST00000590454 SLC51AQ86UW1 340 aa27.13■■□□□ 1.93
R3HDM4-206ENST00000590454 NLRP3Q96P20 1036 aa27.13■■□□□ 1.93
R3HDM4-206ENST00000590454 IRS4O14654 1257 aaPredicted RBP27.12■■□□□ 1.93
R3HDM4-206ENST00000590454 CELF2O95319 508 aaKnown RBP27.12■■□□□ 1.93
R3HDM4-206ENST00000590454 RLBP1P12271 317 aa27.12■■□□□ 1.93
R3HDM4-206ENST00000590454 SUPT20HQ8NEM7 779 aa27.12■■□□□ 1.93
R3HDM4-206ENST00000590454 HHIPL1Q96JK4 782 aa27.12■■□□□ 1.93
R3HDM4-206ENST00000590454 ZNRF3Q9ULT6 936 aa27.12■■□□□ 1.93
R3HDM4-206ENST00000590454 ATP6V0A2Q9Y487 856 aa27.12■■□□□ 1.93
R3HDM4-206ENST00000590454 CXCL9Q07325 125 aa27.11■■□□□ 1.93
R3HDM4-206ENST00000590454 TRPM7Q96QT4 1865 aa27.09■■□□□ 1.93
R3HDM4-206ENST00000590454 GRM8O00222 908 aa27.09■■□□□ 1.93
R3HDM4-206ENST00000590454 PGAP2Q9UHJ9 254 aa27.09■■□□□ 1.93
R3HDM4-206ENST00000590454 CDHR2Q9BYE9 1310 aa27.09■■□□□ 1.93
R3HDM4-206ENST00000590454 GMPSP49915 693 aaPredicted RBP27.08■■□□□ 1.93
R3HDM4-206ENST00000590454 CCT4P50991 539 aaKnown RBP27.08■■□□□ 1.93
R3HDM4-206ENST00000590454 INTS3Q68E01 1043 aaKnown RBP27.08■■□□□ 1.93
R3HDM4-206ENST00000590454 TMEM57Q8N5G2 664 aa27.08■■□□□ 1.93
R3HDM4-206ENST00000590454 RTFDC1Q9BY42 306 aaPredicted RBP27.08■■□□□ 1.93
R3HDM4-206ENST00000590454 GLIS2Q9BZE0 524 aaPredicted RBP27.08■■□□□ 1.93
R3HDM4-206ENST00000590454 USP44Q9H0E7 712 aa27.08■■□□□ 1.93
R3HDM4-206ENST00000590454 NBPF7P0C2Y1 421 aaPredicted RBP27.07■■□□□ 1.92
R3HDM4-206ENST00000590454 PANK1Q8TE04 598 aa27.07■■□□□ 1.92
R3HDM4-206ENST00000590454 ZC3H15Q8WU90 426 aaKnown RBP27.07■■□□□ 1.92
R3HDM4-206ENST00000590454 MCOLN1Q9GZU1 580 aa27.07■■□□□ 1.92
R3HDM4-206ENST00000590454 C9orf78Q9NZ63 289 aaPredicted RBP27.07■■□□□ 1.92
R3HDM4-206ENST00000590454 CIAPIN1Q6FI81 312 aa27.06■■□□□ 1.92
R3HDM4-206ENST00000590454 DZIP1LQ8IYY4 767 aaKnown RBP27.06■■□□□ 1.92
R3HDM4-206ENST00000590454 BBOX1O75936 387 aa27.05■■□□□ 1.92
R3HDM4-206ENST00000590454 DPP8Q6V1X1 898 aaPredicted RBP27.05■■□□□ 1.92
R3HDM4-206ENST00000590454 UTYO14607 1347 aa27.05■■□□□ 1.92
R3HDM4-206ENST00000590454 PDE8AO60658 829 aa27.04■■□□□ 1.92
R3HDM4-206ENST00000590454 TNIP1Q15025 636 aa27.04■■□□□ 1.92
R3HDM4-206ENST00000590454 EPHA10Q5JZY3 1008 aa27.04■■□□□ 1.92
R3HDM4-206ENST00000590454 C20orf194Q5TEA3 1177 aa27.04■■□□□ 1.92
R3HDM4-206ENST00000590454 CDC37L1Q7L3B6 337 aa27.04■■□□□ 1.92
R3HDM4-206ENST00000590454 SP8Q8IXZ3 490 aa27.04■■□□□ 1.92
R3HDM4-206ENST00000590454 CCDC85AQ96PX6 553 aaPredicted RBP27.04■■□□□ 1.92
R3HDM4-206ENST00000590454 ZNF408Q9H9D4 720 aa27.04■■□□□ 1.92
R3HDM4-206ENST00000590454 COL4A1P02462 1669 aa27.04■■□□□ 1.92
R3HDM4-206ENST00000590454 TAF1P21675 1872 aa27.03■■□□□ 1.92
R3HDM4-206ENST00000590454 KIAA2012Q0VF49 1180 aa27.03■■□□□ 1.92
R3HDM4-206ENST00000590454 FTSJ3Q8IY81 847 aaKnown RBP27.03■■□□□ 1.92
R3HDM4-206ENST00000590454 MPNDQ8N594 471 aa27.03■■□□□ 1.92
R3HDM4-206ENST00000590454 KAZALD1Q96I82 304 aa27.03■■□□□ 1.92
R3HDM4-206ENST00000590454 SUCLG2Q96I99 432 aa27.03■■□□□ 1.92
R3HDM4-206ENST00000590454 HIRAP54198 1017 aaPredicted RBP27.02■■□□□ 1.92
R3HDM4-206ENST00000590454 SF3B3Q15393 1217 aaKnown RBP27.02■■□□□ 1.92
R3HDM4-206ENST00000590454 MEIS3Q99687 375 aa27.02■■□□□ 1.92
R3HDM4-206ENST00000590454 RAD17O75943 681 aa27.01■■□□□ 1.91
R3HDM4-206ENST00000590454 CTSWP56202 376 aa27.01■■□□□ 1.91
R3HDM4-206ENST00000590454 FOXO4P98177 505 aa27.01■■□□□ 1.91
R3HDM4-206ENST00000590454 PLA2G12BQ9BX93 195 aa27.01■■□□□ 1.91
R3HDM4-206ENST00000590454 MYH3P11055 1940 aa27■■□□□ 1.91
R3HDM4-206ENST00000590454 NOGQ13253 232 aa27■■□□□ 1.91
R3HDM4-206ENST00000590454 DGKZQ13574 1117 aa27■■□□□ 1.91
R3HDM4-206ENST00000590454 TTLL11Q8NHH1 800 aa27■■□□□ 1.91
R3HDM4-206ENST00000590454 CNOT7Q9UIV1 285 aaKnown RBP27■■□□□ 1.91
R3HDM4-206ENST00000590454 SEC31BQ9NQW1 1179 aa26.99■■□□□ 1.91
R3HDM4-206ENST00000590454 H7C1D1 291 aa26.98■■□□□ 1.91
R3HDM4-206ENST00000590454 RRP1P56182 461 aaKnown RBP26.98■■□□□ 1.91
R3HDM4-206ENST00000590454 TRPM4Q8TD43 1214 aa26.98■■□□□ 1.91
R3HDM4-206ENST00000590454 PCDH10Q9P2E7 1040 aa26.98■■□□□ 1.91
R3HDM4-206ENST00000590454 DDX46Q7L014 1031 aaKnown RBP26.97■■□□□ 1.91
R3HDM4-206ENST00000590454 ITPRIPQ8IWB1 547 aa26.97■■□□□ 1.91
R3HDM4-206ENST00000590454 GREM2Q9H772 168 aa26.97■■□□□ 1.91
R3HDM4-206ENST00000590454 CSF1RP07333 972 aa26.96■■□□□ 1.91
R3HDM4-206ENST00000590454 HSP90B1P14625 803 aaKnown RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms