RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 GPSM2P81274 684 aa10.55□□□□□ -0.72
VAT1-207ENST00000589828 SULF1Q8IWU6 871 aa10.55□□□□□ -0.72
VAT1-207ENST00000589828 CELF1Q92879 486 aaKnown RBP10.55□□□□□ -0.72
VAT1-207ENST00000589828 R3HDMLQ9H3Y0 253 aa10.55□□□□□ -0.72
VAT1-207ENST00000589828 HDAC9Q9UKV0 1011 aa10.55□□□□□ -0.72
VAT1-207ENST00000589828 SCAF8Q9UPN6 1271 aaKnown RBP10.55□□□□□ -0.72
VAT1-207ENST00000589828 ERBB4Q15303 1308 aa10.55□□□□□ -0.72
VAT1-207ENST00000589828 NUP98P52948 1817 aa10.54□□□□□ -0.72
VAT1-207ENST00000589828 GPR25O00155 361 aa10.54□□□□□ -0.72
VAT1-207ENST00000589828 VIL1P09327 827 aaKnown RBP10.54□□□□□ -0.72
VAT1-207ENST00000589828 EIF2S2P20042 333 aaKnown RBP10.54□□□□□ -0.72
VAT1-207ENST00000589828 PPP2R1AP30153 589 aa10.54□□□□□ -0.72
VAT1-207ENST00000589828 ANGEL2Q5VTE6 544 aaKnown RBP10.54□□□□□ -0.72
VAT1-207ENST00000589828 FBXO46Q6PJ61 603 aaPredicted RBP10.54□□□□□ -0.72
VAT1-207ENST00000589828 GCC1Q96CN9 775 aa10.54□□□□□ -0.72
VAT1-207ENST00000589828 TRMT112Q9UI30 125 aaKnown RBP10.54□□□□□ -0.72
VAT1-207ENST00000589828 NSFL1CQ9UNZ2 370 aaKnown RBP10.54□□□□□ -0.72
VAT1-207ENST00000589828 UBE2Q2LH0YL09 131 aa10.53□□□□□ -0.72
VAT1-207ENST00000589828 C6orf229H3BNL8 230 aa10.53□□□□□ -0.72
VAT1-207ENST00000589828 ZNF280AP59817 542 aaPredicted RBP10.53□□□□□ -0.72
VAT1-207ENST00000589828 TCIRG1Q13488 830 aa10.53□□□□□ -0.72
VAT1-207ENST00000589828 SCARF1Q14162 830 aa10.53□□□□□ -0.72
VAT1-207ENST00000589828 PRAMEF18Q5VWM3 479 aa10.53□□□□□ -0.72
VAT1-207ENST00000589828 COPS6Q7L5N1 327 aa10.53□□□□□ -0.72
VAT1-207ENST00000589828 TMC4Q7Z404 712 aa10.53□□□□□ -0.72
VAT1-207ENST00000589828 REM2Q8IYK8 340 aaPredicted RBP10.53□□□□□ -0.72
VAT1-207ENST00000589828 XAGE3Q8WTP9 111 aa10.53□□□□□ -0.72
VAT1-207ENST00000589828 SSUH2Q9Y2M2 353 aa10.53□□□□□ -0.72
VAT1-207ENST00000589828 COL4A1P02462 1669 aa10.53□□□□□ -0.72
VAT1-207ENST00000589828 SH3TC1Q8TE82 1336 aa10.53□□□□□ -0.72
VAT1-207ENST00000589828 LAMB4A4D0S4 1761 aa10.52□□□□□ -0.72
VAT1-207ENST00000589828 POTEFA5A3E0 1075 aa10.52□□□□□ -0.73
VAT1-207ENST00000589828 AIMP1Q12904 312 aaKnown RBP10.52□□□□□ -0.73
VAT1-207ENST00000589828 TBC1D16Q8TBP0 767 aa10.52□□□□□ -0.73
VAT1-207ENST00000589828 NECTIN2Q92692 538 aa10.52□□□□□ -0.73
VAT1-207ENST00000589828 PLEKHF1Q96S99 279 aa10.52□□□□□ -0.73
VAT1-207ENST00000589828 TM4SF4P48230 202 aa10.51□□□□□ -0.73
VAT1-207ENST00000589828 FXR1P51114 621 aaKnown RBP eCLIP10.51□□□□□ -0.73
VAT1-207ENST00000589828 FKBP1BP68106 108 aa10.51□□□□□ -0.73
VAT1-207ENST00000589828 MKRN3Q13064 507 aaKnown RBP10.51□□□□□ -0.73
VAT1-207ENST00000589828 SF3B3Q15393 1217 aaKnown RBP10.51□□□□□ -0.73
VAT1-207ENST00000589828 NOM1Q5C9Z4 860 aaKnown RBP10.51□□□□□ -0.73
VAT1-207ENST00000589828 GMLQ99445 158 aa10.51□□□□□ -0.73
VAT1-207ENST00000589828 FKTNO75072 461 aa10.5□□□□□ -0.73
VAT1-207ENST00000589828 NFE2L2Q16236 605 aa10.5□□□□□ -0.73
VAT1-207ENST00000589828 HSP90AB3PQ58FF7 597 aa10.5□□□□□ -0.73
VAT1-207ENST00000589828 FAM89AQ96GI7 184 aa10.5□□□□□ -0.73
VAT1-207ENST00000589828 EYA3Q99504 573 aa10.5□□□□□ -0.73
VAT1-207ENST00000589828 RSBN1LQ6PCB5 846 aaPredicted RBP10.49□□□□□ -0.73
VAT1-207ENST00000589828 TSPYL4Q9UJ04 414 aa10.49□□□□□ -0.73
VAT1-207ENST00000589828 KDM3BQ7LBC6 1761 aa10.49□□□□□ -0.73
VAT1-207ENST00000589828 RPS8P62241 208 aaKnown RBP10.48□□□□□ -0.73
VAT1-207ENST00000589828 KRT24Q2M2I5 525 aa10.48□□□□□ -0.73
VAT1-207ENST00000589828 RTL5Q5HYW3 569 aaPredicted RBP10.48□□□□□ -0.73
VAT1-207ENST00000589828 AGBL3Q8NEM8 1001 aa10.48□□□□□ -0.73
VAT1-207ENST00000589828 ISCA1Q9BUE6 129 aa10.48□□□□□ -0.73
VAT1-207ENST00000589828 CFHR5Q9BXR6 569 aa10.48□□□□□ -0.73
VAT1-207ENST00000589828 ZC3H12CQ9C0D7 883 aaKnown RBP10.48□□□□□ -0.73
VAT1-207ENST00000589828 MYOZ2Q9NPC6 264 aa10.48□□□□□ -0.73
VAT1-207ENST00000589828 SEC31BQ9NQW1 1179 aa10.48□□□□□ -0.73
VAT1-207ENST00000589828 PODXL2Q9NZ53 605 aa10.48□□□□□ -0.73
VAT1-207ENST00000589828 PITPNM2Q9BZ72 1349 aa10.48□□□□□ -0.73
VAT1-207ENST00000589828 LRRC37AA6NMS7 1700 aa10.47□□□□□ -0.73
VAT1-207ENST00000589828 WTIPA6NIX2 430 aaPredicted RBP10.47□□□□□ -0.73
VAT1-207ENST00000589828 ATP5J2-PTCD1G3V325 749 aa10.47□□□□□ -0.73
VAT1-207ENST00000589828 UFL1O94874 794 aa10.47□□□□□ -0.73
VAT1-207ENST00000589828 USP17L8P0C7I0 530 aa10.47□□□□□ -0.73
VAT1-207ENST00000589828 PTPN12Q05209 780 aaKnown RBP10.47□□□□□ -0.73
VAT1-207ENST00000589828 NBPF9Q3BBW0 867 aa10.47□□□□□ -0.73
VAT1-207ENST00000589828 OTOP1Q7RTM1 612 aa10.47□□□□□ -0.73
VAT1-207ENST00000589828 ZNF609O15014 1411 aa10.47□□□□□ -0.73
VAT1-207ENST00000589828 LAMB2P55268 1798 aa10.47□□□□□ -0.73
VAT1-207ENST00000589828 PAPPA2Q9BXP8 1791 aa10.47□□□□□ -0.73
VAT1-207ENST00000589828 EN2P19622 333 aaPredicted RBP10.46□□□□□ -0.73
VAT1-207ENST00000589828 CAP1Q01518 475 aa10.46□□□□□ -0.73
VAT1-207ENST00000589828 TTLL12Q14166 644 aaPredicted RBP10.46□□□□□ -0.73
VAT1-207ENST00000589828 MXD3Q9BW11 206 aa10.46□□□□□ -0.73
VAT1-207ENST00000589828 TRIM17Q9Y577 477 aa10.46□□□□□ -0.73
VAT1-207ENST00000589828 TAF1P21675 1872 aa10.46□□□□□ -0.74
VAT1-207ENST00000589828 POLR2AP24928 1970 aaKnown RBP10.46□□□□□ -0.74
VAT1-207ENST00000589828 ANKRD36CQ5JPF3 1778 aa10.45□□□□□ -0.74
VAT1-207ENST00000589828 IRS4O14654 1257 aaPredicted RBP10.45□□□□□ -0.74
VAT1-207ENST00000589828 PRKG1Q13976 671 aa10.45□□□□□ -0.74
VAT1-207ENST00000589828 SPRYD7Q5W111 196 aa10.45□□□□□ -0.74
VAT1-207ENST00000589828 CHPF2Q9P2E5 772 aa10.45□□□□□ -0.74
VAT1-207ENST00000589828 GGA1Q9UJY5 639 aa10.45□□□□□ -0.74
VAT1-207ENST00000589828 FZD1Q9UP38 647 aa10.45□□□□□ -0.74
VAT1-207ENST00000589828 COLQQ9Y215 455 aaPredicted RBP10.45□□□□□ -0.74
VAT1-207ENST00000589828 SCN9AQ15858 1988 aa10.45□□□□□ -0.74
VAT1-207ENST00000589828 AKAP11Q9UKA4 1901 aa10.45□□□□□ -0.74
VAT1-207ENST00000589828 USP17L3A6NCW0 530 aa10.44□□□□□ -0.74
VAT1-207ENST00000589828 USP17L4A6NCW7 530 aa10.44□□□□□ -0.74
VAT1-207ENST00000589828 G3V3G9 751 aa10.44□□□□□ -0.74
VAT1-207ENST00000589828 WNT10BO00744 389 aa10.44□□□□□ -0.74
VAT1-207ENST00000589828 NEFMP07197 916 aa10.44□□□□□ -0.74
VAT1-207ENST00000589828 SREBF2Q12772 1141 aa10.44□□□□□ -0.74
VAT1-207ENST00000589828 LDLRAD1Q5T700 205 aa10.44□□□□□ -0.74
VAT1-207ENST00000589828 DCAF8Q5TAQ9 597 aa10.44□□□□□ -0.74
VAT1-207ENST00000589828 USP17L1Q7RTZ2 530 aa10.44□□□□□ -0.74
VAT1-207ENST00000589828 PLBD2Q8NHP8 589 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms